Gcaud8754.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8754.t1
Unique NameGcaud8754.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length311
Homology
[Close]
BLAST of Gcaud8754.t1 vs. uniprot
Match: A0A2V3IUQ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUQ7_9FLOR)

HSP 1 Score: 261 bits (667), Expect = 2.600e-83
Identity = 135/266 (50.75%), Postives = 181/266 (68.05%), Query Frame = 0 
Query:    6 LTRLSLVQKIRLRHEEVKRWRKKCRVKKIQPNVIDEIIKGSPRTPSQALSFINNARSIGFNPANFSPVLCKTVINRNLQRLLLGEARALLPNAGRGHVTSKEVADVSGRAVESKYKICSRPYLPGVKEVAEIAHEALHNAVHQFERENRAKLD-----SKEPVALGAWFDKTTENDQPIRITIMHIGPKEKAHISRRRDRFPFWGAAVLCLQEKKNP-DSGITLHNDRPFDKAWF-LQDGDMMIITPKSVQSVVITATNREAHALI 264
            LTRLS+ QKIRLRHEEVKRWRK CRVKKI+P+VI+EI+ GSPRTP+QA SFINN+R +GFNPA F P + K +++++L   LL EAR LLP        S    D   + V+  YK+CSRPYLP VKE A+I H ALH AV+++E  NR  LD     ++E VALGAWFDKTT++DQPIR  ++HI P    +IS  R++FPFWGA V+C+Q      ++G+ L ++R        +++GD+ ++ PK   S+V T T  +A+  I
Sbjct:    8 LTRLSITQKIRLRHEEVKRWRKSCRVKKIEPHVINEIVHGSPRTPAQAYSFINNSRHLGFNPAGFRPHVRKKLLSKHLHHHLLNEARVLLPVVPE----SMGSHDPKSKVVDIPYKLCSRPYLPTVKEAAQIGHHALHQAVYEYESANRELLDKDQWSARESVALGAWFDKTTKSDQPIRAFVLHIAPNASCNISPIREKFPFWGAIVICVQHPHTSFENGLRLRSERAGGAPLIDMRNGDIFLVPPKLAHSIVATTTISDAYLFI 269
The following BLAST results are available for this feature:
BLAST of Gcaud8754.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUQ7_9FLOR2.600e-8350.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_40_length_68803_cov_4.393963contigNODE_40_length_68803_cov_4.393963:16368..18855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8754.t1Gcaud8754.t1Gracilaria caudata M_176_S67 malemRNANODE_40_length_68803_cov_4.393963 16368..18855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8754.t1 ID=Gcaud8754.t1|Name=Gcaud8754.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=311bp
MGRGKLTRLSLVQKIRLRHEEVKRWRKKCRVKKIQPNVIDEIIKGSPRTP
SQALSFINNARSIGFNPANFSPVLCKTVINRNLQRLLLGEARALLPNAGR
GHVTSKEVADVSGRAVESKYKICSRPYLPGVKEVAEIAHEALHNAVHQFE
RENRAKLDSKEPVALGAWFDKTTENDQPIRITIMHIGPKEKAHISRRRDR
FPFWGAAVLCLQEKKNPDSGITLHNDRPFDKAWFLQDGDMMIITPKSVQS
VVITATNREAHALINAFVRKHRLVEPAFAITAGPRLLPSVRRTNVEAVTS
ATVPELRCVM*
back to top