Gcaud8625.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8625.t1
Unique NameGcaud8625.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length433
Homology
BLAST of Gcaud8625.t1 vs. uniprot
Match: A0A2V3II21_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II21_9FLOR)

HSP 1 Score: 293 bits (751), Expect = 1.040e-91
Identity = 171/435 (39.31%), Postives = 250/435 (57.47%), Query Frame = 0
Query:   46 GRQIQVRTIKYPIWSEGLLLRQSSHILLFALRIVCIALPVYLETRLESRSERPLVSRNLQHAFVVDPREHDITKLSNDKGLALD--LLPRELFARCASLDDEGWLHARVVNVTLVDEDRRRIRCVKHTEQVIYRNIERLPPFVHPSSSEVRGYVDDTPLYQPNLTVKVQMDKGPFRAF-PWWVGSEVEPEEQFAQVNSVTVEDTNGMQCFFWGSPLPAS--------------------------------------------VTSPGTFRISTQFTVSTTFKYLGSLQFKDRVWIHGGHLIRRLNVPAILTRSMFQAVLQQLLYERATNVSISLPGDEEKHSVQLDDVVVILGSVEVGVVILFALLLALYSRYKKKDIQRVNTVDGLSQCWAWDRAATY---GTELQSYIVLRLRRTMGPVWGGDEANAYEHVE 430
            G+ I+VR+I YP+W+EGL  RQ SH+LLF +RI CI +PVYLETR  S S    V + +++A+V  P  HD+  L +++    +  LLP E+F RCA+ DD+GW+ A++ NVTLV +DR  I CVK TEQ +YR +E+ P FV  S        + T +YQPNLT++V  D+GPF+ F PW    + +P  Q+ QV +VTV DT   QCFFW +P+                                               +   G   +S Q  VSTTF+++GSL++K+ + I+ GHL R        TR  F  +++ +LY RA+NV++ +PGDE+  SV+LD VV+++G++EV VV++  L LA+ SRYK  D+QR NTV+GLS  WA  ++ T+    ++    I LRL+R    +  G E   Y+ V+
Sbjct:    2 GKSIRVRSIPYPLWNEGLFHRQPSHLLLFLIRIACIVIPVYLETRFISHSNPIPVKKLIRNAYVSQPNYHDVHPLWSEQRDPRNVVLLPEEVFHRCAARDDDGWVIAKIANVTLVGKDRDLIHCVKGTEQAVYRTVEKTPHFVESSVVVNDQSKEKTFVYQPNLTLEVWRDEGPFKRFSPWPSVEDDDPNRQYLQVKNVTVLDTKDFQCFFWRAPVAEGHAFDREDRIYEYVLDSFVCQNVTGNFVDFYFTSVQDLANESNTRILEQGGNLVSKQSIVSTTFEFIGSLEYKNEIIINAGHLSRHQFRFPPTTRFQFLLMIRAILYSRASNVTVEVPGDEKTRSVELDVVVIVVGAMEVIVVLVLGLTLAVISRYKWDDMQRANTVEGLSHIWAMTQSRTWWDLSSKKNGPISLRLKRY---ICDGKERFMYDAVQ 433          
BLAST of Gcaud8625.t1 vs. uniprot
Match: A0A2V3II28_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II28_9FLOR)

HSP 1 Score: 188 bits (478), Expect = 5.130e-51
Identity = 158/475 (33.26%), Postives = 225/475 (47.37%), Query Frame = 0
Query:    1 MLTLPFDTGIIAALIFLIFELLVIPLLMHFTSTLASFLLTRRAQTGRQIQVRTIKYPIWSEGLLLRQSSHILLFALRIVCIALPVYLETRLESRSERPLVSRNLQHAFVVDPREHDITKLSNDKGLALDLLPR---ELFARCASLDDEGWLHARVVNVTLVDE-DRRRIRCVKHTEQVIYRNIERLPPFVHPSSSEVRGYVDDTPLYQPNLTVKVQMDKGPFRAFPWWV------GSEVEPEEQFAQV-NSVTVEDTNGMQCFFW------------GSP---------------------------LPASVTSPGTFRI----------STQFTVSTTFKYLGSLQFKDRVWIHGGHLIRRLNVPAILTRSMFQAVLQQLLYERATNVSISLPGDEEKHSVQLDDVVVILGSVEVGVVILFALLLALYSRYKKKDIQRVNTVDGLSQCWAWDRAAT--YGTELQSYIVLRLRRT 413
            M+ +PF +G+++AL+FL FE++V PLL + TS LAS  L R A+ G  + +  +K+P+WSEGL   Q+SH  L A+RIV IA+PVYLET LESR E  +VSR + HAFV  P + D        G  +D L R     F  C S+D++GW+ A+V N T + E D  +IRCV +TEQ IY   E    +  P + ++             L + V   +G    FP  +      G E  P E   +V N+V + DT  ++C+F             G P                           LP    S  T             S   T      Y GS QFKD+V +   HL     +P   +      + Q +LY +A+NV++           +++   +I+   E+ VV+LFAL+L+     K   IQ+ NTV GLS CWA  + A     T+   +I LRLRRT
Sbjct:    1 MVVVPFSSGVVSALLFLAFEIIVFPLLFYSTSILASLFLYRNARKGNDVVIDKMKFPLWSEGLSRHQTSHYSLLAIRIVLIAIPVYLETTLESREEPEMVSRTVTHAFVPQPTD-DWYTYQIRSGEHIDSLRRTGLNTFLACTSVDEKGWVWAKVANFTYIQEHDAHQIRCVSNTEQPIYSLTEATVKY-GPGNVQL-------------LKMSVSWTEGRVADFPQALVLKDRFGREAPPGETAFRVHNAVALNDT-AVKCYFPQTVRTRFSKSRNGHPHTAWRGWCQKEEPIGVAFYSLLVNMDQLPMHNLSYETRERGRCGSSCKLRSRNATTVLEIVYRGSFQFKDKVLLGAKHLAN--YIPDYDSSLRASDIAQCILYSKASNVTVLTLSGRTLPRTEIEGRAIIIAISEIVVVLLFALMLSCARLSKWGHIQQPNTVSGLSNCWAESQKALSHQRTKEGKWIKLRLRRT 457          
The following BLAST results are available for this feature:
BLAST of Gcaud8625.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3II21_9FLOR1.040e-9139.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II28_9FLOR5.130e-5133.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 347..369
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 370..432
NoneNo IPR availableTMHMMTMhelixcoord: 347..369
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_901_length_16318_cov_4.606212contigNODE_901_length_16318_cov_4.606212:9632..11059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8625.t1Gcaud8625.t1Gracilaria caudata M_176_S67 malemRNANODE_901_length_16318_cov_4.606212 9632..11059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8625.t1 ID=Gcaud8625.t1|Name=Gcaud8625.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=433bp
MLTLPFDTGIIAALIFLIFELLVIPLLMHFTSTLASFLLTRRAQTGRQIQ
VRTIKYPIWSEGLLLRQSSHILLFALRIVCIALPVYLETRLESRSERPLV
SRNLQHAFVVDPREHDITKLSNDKGLALDLLPRELFARCASLDDEGWLHA
RVVNVTLVDEDRRRIRCVKHTEQVIYRNIERLPPFVHPSSSEVRGYVDDT
PLYQPNLTVKVQMDKGPFRAFPWWVGSEVEPEEQFAQVNSVTVEDTNGMQ
CFFWGSPLPASVTSPGTFRISTQFTVSTTFKYLGSLQFKDRVWIHGGHLI
RRLNVPAILTRSMFQAVLQQLLYERATNVSISLPGDEEKHSVQLDDVVVI
LGSVEVGVVILFALLLALYSRYKKKDIQRVNTVDGLSQCWAWDRAATYGT
ELQSYIVLRLRRTMGPVWGGDEANAYEHVELR*
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