Gcaud8620.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8620.t1
Unique NameGcaud8620.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length334
Homology
BLAST of Gcaud8620.t1 vs. uniprot
Match: A0A2V3IXE6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXE6_9FLOR)

HSP 1 Score: 301 bits (770), Expect = 1.280e-97
Identity = 183/337 (54.30%), Postives = 218/337 (64.69%), Query Frame = 0
Query:    1 MTEREVVDACLKVVSNRCRNLRKAIDRAKTWEQAAASGQELNPEQVESVKSCVKKEALLAELQEILKKQTTIVEPSERAEQKQQTSQRSAKAVRAKGKRSKASQGQGESHTSSADGTQRDDDSD--ISNTAQEKNRSHGTTDDSSEVSPSQYPAVDVQRLKNENQSLRREMDELKSALRTENAQVKKENVRRVLNLFHVVDFLRQPGSREALLSYSQEQPDRAAAFVTELDMDLLCYFNVMLTSPNGNVPHDEAVDVSTLHCLEFLQNSNLDAFKDTSYAALNKIVDSIATSPILTDRGREELANAALFGD--LHDGLNGNTPGYEVSHAHANVSVP 333
            M +REV+DACLKVVSNRCRNLRKAIDRAKTWEQAAA GQ+LN EQ+ESVKSCVKKEALLAELQEILKKQT+IVE  E+ E                                              ++ + ++      + + S+                        E+++LK +  TE   +KKENVR+VLNLFH+VDFLRQ GSREAL  Y+   P+    FVTELDMDLLCYFNVMLTSPNGNVPH+EAVDVSTLHCLEFLQNS LDAFKDTSY AL +IVD I++ PILT+RG +E A AAL  +  +HDG NGN P +EV+ A ANV++P
Sbjct:    1 MADREVIDACLKVVSNRCRNLRKAIDRAKTWEQAAAKGQDLNAEQLESVKSCVKKEALLAELQEILKKQTSIVERPEQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALTTSPRDAKSPDYSKESSAXXXXXXXXXXXXXXXXXXXXXXXXELEDLKESKATEQNGMKKENVRKVLNLFHIVDFLRQQGSREALHGYAASHPETIGNFVTELDMDLLCYFNVMLTSPNGNVPHNEAVDVSTLHCLEFLQNSQLDAFKDTSYEALTRIVDKISSCPILTERGLDERAKAALQSEKFVHDGTNGNGPAHEVTDARANVAIP 337          
BLAST of Gcaud8620.t1 vs. uniprot
Match: R7QCM9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCM9_CHOCR)

HSP 1 Score: 227 bits (578), Expect = 2.240e-67
Identity = 154/318 (48.43%), Postives = 200/318 (62.89%), Query Frame = 0
Query:    1 MTEREVVDACLKVVSNRCRNLRKAIDRAKTWEQAAASGQELNPEQVESVKSCVKKEALLAELQEILKKQTTIVEPSERAEQKQQTSQRSAKAVRAKGKRSKAS----------QGQGESHTSSADGTQRDDDSDISNTAQEKN---RSHGTTDDS--SEVSPSQYPAVDVQRLKNENQS-----LRREMDELKSALRTENAQVKKENVRRVLNLFHVVDFLRQPGSREALLSYSQEQPDRAAAFVTE-LDMDLLCYFNVMLTSPNGNVPHDEAVDVSTLHCLEFLQNSNLDAFKDTSYAALNKIVDSIATSPILTDRG 297
            M+ ++  D+ L++VSN+CRNLRKAIDRA+T E A   G +LN EQ ESV+   +KEALL ELQEILKKQT ++EP +  E KQ  S+R+ KA RAK +  K S          +G+       A+   R D S+ ++     N   +   + D++  +E    Q   +++ R ++E  S     L +EM ELK +   + AQ KK+ +   LNLFHV DFLRQPGSREALLSY      + +  V   L +D +CYFNVMLTSPNGNVPH EAVDVST HCLE+LQ S  DAF  TSYAAL +IVD+IA+ PILTDRG
Sbjct:   85 MSSKDQTDSLLRIVSNKCRNLRKAIDRARTQEAAEKRGDQLNDEQRESVRGLGRKEALLVELQEILKKQTAVLEPQQ-PETKQ--SRRAKKAARAKAREGKGSSKSISEKSSEEGERSEKVPEAESGARPDGSETAHPNGNGNPAGKGEPSADEARKAERGAEQLAELEILRKQSEEMSKERDALLKEMAELKLSHEHQLAQDKKKAIASTLNLFHVADFLRQPGSREALLSYYATPEGKTSPLVLNGLHLDPVCYFNVMLTSPNGNVPHPEAVDVSTAHCLEYLQGSTTDAFIGTSYAALVEIVDTIASCPILTDRG 399          
BLAST of Gcaud8620.t1 vs. uniprot
Match: M2X619_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X619_GALSU)

HSP 1 Score: 81.3 bits (199), Expect = 2.710e-13
Identity = 48/142 (33.80%), Postives = 81/142 (57.04%), Query Frame = 0
Query:  172 LKSALRTENAQVKKEN---------VRRVLNLFHVVDFL-RQPGSREALLSYSQEQPDRAAAFVTELDMDLLCYFNVMLTSPNGNVPHDEAVDVSTLHCLEFLQNSNLDAFKDTSYAALNKIVDSIATSPILTDRGREELAN 303
            L+SA++ E   V++ N         V+ +L + HV DF+  +P + E ++  + E P      ++ + MD + YF  MLTSP+G++P + A+ VST H +E+LQ S  +A    SY  L++I+ +IA+ P+L  RG    +N
Sbjct:  119 LESAVQAEEDGVEQLNKKQQQEEALVQNILTILHVSDFIVNEPEAVETIVKENLELPQGKFGKLSRVHMDSVNYFAKMLTSPDGDIPIERALLVSTYHAMEYLQRSKKEAIPGISYEFLHEIISTIASHPLLVFRGVNNSSN 260          
BLAST of Gcaud8620.t1 vs. uniprot
Match: A0A7S2ZG09_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZG09_9RHOD)

HSP 1 Score: 62.8 bits (151), Expect = 3.070e-7
Identity = 37/118 (31.36%), Postives = 67/118 (56.78%), Query Frame = 0
Query:  186 ENVRRVLNLFHVVDFLR-QPGSREALLSYSQE--QPDRAAAFVTELDMDLLCYFNVMLTSPNGNVPHDEAVDVSTLHCLEFLQNSNLDAFKDTSYAALNKIVDSIATSPILTDRGREE 300
            E  + +LNL HV D +  +  + +A+L   +   +P  +    +E D+  + YF +MLT+P+G VP +EAV VS+ H   +++ S  DAF   +Y +L  +V  ++ +  L +R ++E
Sbjct:  166 EVTQELLNLLHVADRINHEKETVKAVLEDFERNGKPGLSENTCSEQDLKAITYFAMMLTTPDGVVPLNEAVRVSSFHAENYIKRSAEDAFPGCTYESLASLVSQVSDTDTLQNRNQQE 283          
BLAST of Gcaud8620.t1 vs. uniprot
Match: A0A7S0BHY7_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHY7_9RHOD)

HSP 1 Score: 59.7 bits (143), Expect = 1.150e-6
Identity = 70/262 (26.72%), Postives = 124/262 (47.33%), Query Frame = 0
Query:   10 CLKVVSNRCRNLRKAIDRAKTWEQAAASGQELNPEQVESVKSCVKKEALLAELQEILKKQTTIVEPSERAEQKQQTSQRSAKAVRAKGKRSKASQGQGESHTSSADGTQRDDDSDISNTAQEKNRSHGTTDDSSEVSPSQYPA-VDVQRLKNENQSLRREMDELKSALRTENAQVKKENVRRVLNLFHVVD-FLRQPGSREALLSYSQE--QPDRAAAFVTELDMDLLCYFNVMLTSPNGNVPHDEAVDVSTLHCLEFLQNS 267
            C K++ N+ RNL+KAI++    E+A   G+ LN +Q+ESV++   K       +E+ KKQT + +  E+   +Q+  +   +    + K  + ++ + E+ T+                   K  +  TT D+  V   Q  A   VQ          R   E K+          +E  + +LNL HV D F  +  + +A+L + +   +P  + +  +E D+  + YF +MLT+P+G VP +EAV VS+ H   +++ S
Sbjct:   20 CSKILLNKLRNLKKAIEKVHHLEEALQRGETLNDQQLESVRTKELKXXXXXXXEEVHKKQTVVFK-KEKDTVRQKLFEDFKQLSAPEKKEEEVTKPEVEAETAPEPEEPA------------KEVATSTTQDAHSVESEQAAASYPVQP---------RPQPEEKTG---------QEVTQELLNLLHVADRFNHEKETVKAVLEHFERNGKPGLSESTCSEQDLKAITYFAMMLTTPDGVVPLNEAVRVSSFHAENYIKRS 250          
The following BLAST results are available for this feature:
BLAST of Gcaud8620.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IXE6_9FLOR1.280e-9754.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QCM9_CHOCR2.240e-6748.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2X619_GALSU2.710e-1333.80Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S2ZG09_9RHOD3.070e-731.36Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BHY7_9RHOD1.150e-626.72Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_329_length_29763_cov_4.543981contigNODE_329_length_29763_cov_4.543981:19949..20950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8620.t1Gcaud8620.t1Gracilaria caudata M_176_S67 malemRNANODE_329_length_29763_cov_4.543981 19949..20950 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8620.t1 ID=Gcaud8620.t1|Name=Gcaud8620.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=334bp
MTEREVVDACLKVVSNRCRNLRKAIDRAKTWEQAAASGQELNPEQVESVK
SCVKKEALLAELQEILKKQTTIVEPSERAEQKQQTSQRSAKAVRAKGKRS
KASQGQGESHTSSADGTQRDDDSDISNTAQEKNRSHGTTDDSSEVSPSQY
PAVDVQRLKNENQSLRREMDELKSALRTENAQVKKENVRRVLNLFHVVDF
LRQPGSREALLSYSQEQPDRAAAFVTELDMDLLCYFNVMLTSPNGNVPHD
EAVDVSTLHCLEFLQNSNLDAFKDTSYAALNKIVDSIATSPILTDRGREE
LANAALFGDLHDGLNGNTPGYEVSHAHANVSVP*
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