Gcaud8619.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8619.t1
Unique NameGcaud8619.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length217
Homology
BLAST of Gcaud8619.t1 vs. uniprot
Match: A0A2V3IXI9_9FLOR (Nascent polypeptide-associated complex subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXI9_9FLOR)

HSP 1 Score: 272 bits (695), Expect = 6.370e-90
Identity = 144/170 (84.71%), Postives = 152/170 (89.41%), Query Frame = 0
Query:    1 MEGGIDKEKLAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKPLQDMLPSIVNQLGADNMPQMKSLMDQLGAAGIGGQAPPLRKSASIEINEEEIPDLVGADNFEEKATAEAA 170
            MEG +DKEKLAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLS LPGIEEVNIFRDNG VINF+NPKVQAQISANTYVVSGQAVT  LQDMLPSIVNQLGADNMPQMKSLMDQLGAAG+GGQ    +     E ++EEIPDLVG  NFEEKA A+A+
Sbjct:    1 MEGSVDKEKLAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSQLPGIEEVNIFRDNGTVINFKNPKVQAQISANTYVVSGQAVTNSLQDMLPSIVNQLGADNMPQMKSLMDQLGAAGLGGQGAAAKAGGDDEGDDEEIPDLVGTANFEEKAAADAS 170          
BLAST of Gcaud8619.t1 vs. uniprot
Match: R7QCJ9_CHOCR (Nascent polypeptide-associated complex subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCJ9_CHOCR)

HSP 1 Score: 228 bits (580), Expect = 7.530e-73
Identity = 128/162 (79.01%), Postives = 140/162 (86.42%), Query Frame = 0
Query:   16 MAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKPLQDMLPSIVNQLGADNMPQMKSLMDQLGAAGIGGQAPPLRKSASIEI--NEEEIPDLVGADNFEEKA--TAEAAKDE 173
            MAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQ+TLKRLQLS LPGIEEVNIF+DNG VINFQNPKVQAQISANTYV+SG AVTKPLQ+MLPSIVNQLGADNMPQMKSLMDQLGA G+G  A   + +A      ++E+IPDLV   NFE+KA  T EAAK+E
Sbjct:    1 MAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQSTLKRLQLSQLPGIEEVNIFKDNGSVINFQNPKVQAQISANTYVISGAAVTKPLQEMLPSIVNQLGADNMPQMKSLMDQLGA-GMGPAAAAAQAAAQATEGGDDEDIPDLVDNANFEQKAEETDEAAKEE 161          
BLAST of Gcaud8619.t1 vs. uniprot
Match: M2Y7R0_GALSU (Nascent polypeptide-associated complex subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7R0_GALSU)

HSP 1 Score: 184 bits (468), Expect = 5.910e-56
Identity = 97/159 (61.01%), Postives = 120/159 (75.47%), Query Frame = 0
Query:    5 IDKEKLAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKPLQDMLPSIVNQLGADNMPQMKSLMDQLGAAGIGGQAPPLRKSASIEINEEEIPDLVGADNFEE 163
            +  EKLAKLQRMA  VR GGKG+VRRKKKAVHK  PTDDKRLQ+TLKRL L+ +PGIEEVNIF+DNGQVINF  PKVQA I ANTYVVSGQ  TK LQ++LP+++NQLG+DN+ QM+SLM+ L      G A         + ++++IP+LV    F++
Sbjct:    6 LKNEKLAKLQRMAVNVRTGGKGTVRRKKKAVHKGTPTDDKRLQSTLKRLGLNQIPGIEEVNIFKDNGQVINFTTPKVQAAIGANTYVVSGQGETKSLQELLPNVLNQLGSDNLAQMRSLMESLSTTDDKGDAT--ENGEKSKEDDDDIPELVETKTFDQ 162          
BLAST of Gcaud8619.t1 vs. uniprot
Match: A0A7S2IFA1_9EUKA (Nascent polypeptide-associated complex subunit beta n=2 Tax=Haptolina TaxID=1090112 RepID=A0A7S2IFA1_9EUKA)

HSP 1 Score: 171 bits (432), Expect = 1.300e-50
Identity = 97/162 (59.88%), Postives = 119/162 (73.46%), Query Frame = 0
Query:    5 IDKEKLAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKPLQDMLPSIVNQLGADNMPQMKSLMDQLGAAGIGGQAPPLRKSASIEINEEEIPDLVGADNFEEKAT 166
            ++ EKLAK   MAA VR GGKGSVRRKKKA+HK   TDDKRLQ TLKRL ++++P IEEVN+F+DNG VI+F NPKVQA I+ANTYVVSG A TK LQD+LP I+NQLG DN+  +K L +   + G    APP    A    ++E++PDLV  DNFEE A+
Sbjct:   19 MNAEKLAK---MAAQVRTGGKGSVRRKKKAIHKTTTTDDKRLQNTLKRLGVNNIPAIEEVNLFKDNGTVIHFNNPKVQASIAANTYVVSGHAETKKLQDLLPGIINQLGPDNLANLKKLAETYQSGG----APPPTAGAD---DDEDVPDLV--DNFEEAAS 168          
BLAST of Gcaud8619.t1 vs. uniprot
Match: A0A7S0VSI5_9CRYP (Nascent polypeptide-associated complex subunit beta (Fragment) n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VSI5_9CRYP)

HSP 1 Score: 169 bits (428), Expect = 1.440e-50
Identity = 86/127 (67.72%), Postives = 104/127 (81.89%), Query Frame = 0
Query:    5 IDKEKLAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKPLQDMLPSIVNQLGADNMPQMKSLMDQLGAAG 131
            +D+EKLAKL   AA VR GGKGSVRRKKKAVHK A TDDKRLQ TLKRL ++++PGIEEVN+FRDNGQV++F+NP VQA I ANTYV+SG A TK LQD+LP I+NQLG DN+  +K +  ++GA G
Sbjct:    3 VDQEKLAKL---AASVRTGGKGSVRRKKKAVHKTATTDDKRLQNTLKRLGVNNIPGIEEVNLFRDNGQVVHFKNPMVQASIGANTYVISGSAETKKLQDLLPGIINQLGPDNLENLKRISGEMGAPG 126          
BLAST of Gcaud8619.t1 vs. uniprot
Match: R1DCP8_EMIHU (Nascent polypeptide-associated complex subunit beta n=3 Tax=Eukaryota TaxID=2759 RepID=R1DCP8_EMIHU)

HSP 1 Score: 169 bits (427), Expect = 4.350e-50
Identity = 97/161 (60.25%), Postives = 120/161 (74.53%), Query Frame = 0
Query:    5 IDKEKLAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKPLQDMLPSIVNQLGADNMPQMKSLMDQLGAAGIGGQAPPLRKSASIEINEEEIPDLVGADNFEEKA 165
            ++ EKLAK   MAA VR GGKGSVRRKKKAVHK   TDDKRLQ TLKRL ++++P IEEVN+F+DNG V++F NPKVQA I+ANTYVVSGQA TK LQ++LP I+NQLG DN+  +K + +   A G  GQ P    +   E ++E++PDLV  DNFEE A
Sbjct:    1 MNPEKLAK---MAAQVRTGGKGSVRRKKKAVHKTTTTDDKRLQNTLKRLGVNNIPAIEEVNLFKDNGTVVHFNNPKVQASIAANTYVVSGQAETKKLQELLPGIINQLGPDNLANLKKIAESYQAGG-PGQIP----TGDAE-DDEDVPDLV--DNFEETA 150          
BLAST of Gcaud8619.t1 vs. uniprot
Match: A0A8J6CB07_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CB07_DIALT)

HSP 1 Score: 166 bits (421), Expect = 4.820e-49
Identity = 93/165 (56.36%), Postives = 114/165 (69.09%), Query Frame = 0
Query:    1 MEGGIDKEKLAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKPLQDMLPSIVNQLGADNMPQMKSLMDQLGAAGIGGQAPPLRKSASIEINEEEIPDLVGADNFEEKA 165
            M  G+      KL++MA  VR GGKGSVRRKKKA+HK   TDDKRLQ TLKRL  +++P IEEVN+F+DNG VI+F NPKVQA I+ANTYV+SG A TK LQD+LPSI+NQLG DN+  +K +    G AG     P   K       E+++P+LV  DNFEE A
Sbjct:    1 MTRGLTAMNQDKLKKMAESVRTGGKGSVRRKKKAIHKTTTTDDKRLQNTLKRLSCNNIPAIEEVNLFKDNGTVIHFTNPKVQASIAANTYVISGHAETKRLQDLLPSIINQLGPDNLDALKRMAQDQGGAGA---YPGGGKITEAPEEEDDMPELV--DNFEETA 160          
BLAST of Gcaud8619.t1 vs. uniprot
Match: A0A061R8G0_9CHLO (Nascent polypeptide-associated complex subunit beta n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R8G0_9CHLO)

HSP 1 Score: 163 bits (413), Expect = 5.550e-48
Identity = 92/152 (60.53%), Postives = 114/152 (75.00%), Query Frame = 0
Query:   12 KLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKPLQDMLPSIVNQLGADNMPQMKSLMDQLGAAGIGGQAPPLRKSASIEINEEEIPDLVGADNFEE 163
            KLQRMA  VR GGKG+VRRKKKAVHK   TDDKRLQ TLKRL ++ +PGIEEVNIF+D+  VI+F NPKVQA I+ANTYVVSG + TK LQ++LPSI+NQLG DN+  +K +  Q       G AP   ++A  +  E+++PDLVG +NFEE
Sbjct:    5 KLQRMAGAVRTGGKGTVRRKKKAVHKTNSTDDKRLQGTLKRLGVNTIPGIEEVNIFKDD-DVIHFLNPKVQASIAANTYVVSGPSQTKKLQELLPSIINQLGPDNLQNLKKIAQQYQ-----GAAPQSAEAAGDD--EDDVPDLVGGENFEE 148          
BLAST of Gcaud8619.t1 vs. uniprot
Match: A0A250WPJ5_9CHLO (Nascent polypeptide-associated complex subunit beta n=2 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WPJ5_9CHLO)

HSP 1 Score: 161 bits (408), Expect = 3.700e-47
Identity = 88/156 (56.41%), Postives = 119/156 (76.28%), Query Frame = 0
Query:   10 LAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKPLQDMLPSIVNQLGADNMPQMKSLMDQLGAAGIGGQAPPLRKSASIEINEEEIPDLVGADNFEEKA 165
            L +L++MA  VR GGKG++RRKKKAVHK   TDDKRLQ+ LKRL ++ +PGIEEVNIF+D+  VI+F NPKVQA I+ANTYV+SG + TK LQD+LP I+NQ+G D++ Q+K +M Q+G A   G   P + +AS   +++++PDLV  +NFEE A
Sbjct:    3 LDRLKKMAGAVRTGGKGTMRRKKKAVHKTTTTDDKRLQSVLKRLGVNTIPGIEEVNIFKDD-DVIHFTNPKVQASIAANTYVISGPSQTKKLQDLLPGILNQMGPDSLMQLKKMMAQMGGAAGLGAGFPGKGAASGNDDDDDVPDLV--ENFEEAA 155          
BLAST of Gcaud8619.t1 vs. uniprot
Match: A0A7S0J5W1_9EUKA (Nascent polypeptide-associated complex subunit beta n=2 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A7S0J5W1_9EUKA)

HSP 1 Score: 161 bits (408), Expect = 4.750e-47
Identity = 94/161 (58.39%), Postives = 112/161 (69.57%), Query Frame = 0
Query:    5 IDKEKLAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTLKRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKPLQDMLPSIVNQLGADNMPQMKSLMDQLGAAGIGGQAPPLRKSASIEINEEEIPDLVGADNFEEKA 165
            ++ EKLAK   MAA VR GGKGSVRRKKKA+HK   TDDKRLQ TLKRL ++++P IEEVN+F+DNG VI+F NPKVQA I+ANTYVVSG A TK LQD+LP I+NQLG DN+  +K +     A    G AP            E++PDLV  DNFE  A
Sbjct:   14 MNPEKLAK---MAAQVRTGGKGSVRRKKKAIHKTTTTDDKRLQNTLKRLGVNNIPAIEEVNLFKDNGTVIHFSNPKVQASIAANTYVVSGHAETKKLQDLLPGIINQLGPDNLANLKKI-----AESYQGSAPXXXXXXXXXX--EDVPDLV--DNFEANA 162          
The following BLAST results are available for this feature:
BLAST of Gcaud8619.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXI9_9FLOR6.370e-9084.71Nascent polypeptide-associated complex subunit bet... [more]
R7QCJ9_CHOCR7.530e-7379.01Nascent polypeptide-associated complex subunit bet... [more]
M2Y7R0_GALSU5.910e-5661.01Nascent polypeptide-associated complex subunit bet... [more]
A0A7S2IFA1_9EUKA1.300e-5059.88Nascent polypeptide-associated complex subunit bet... [more]
A0A7S0VSI5_9CRYP1.440e-5067.72Nascent polypeptide-associated complex subunit bet... [more]
R1DCP8_EMIHU4.350e-5060.25Nascent polypeptide-associated complex subunit bet... [more]
A0A8J6CB07_DIALT4.820e-4956.36Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A061R8G0_9CHLO5.550e-4860.53Nascent polypeptide-associated complex subunit bet... [more]
A0A250WPJ5_9CHLO3.700e-4756.41Nascent polypeptide-associated complex subunit bet... [more]
A0A7S0J5W1_9EUKA4.750e-4758.39Nascent polypeptide-associated complex subunit bet... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002715Nascent polypeptide-associated complex NAC domainSMARTSM01407NAC_2coord: 43..99
e-value: 4.3E-19
score: 79.4
IPR002715Nascent polypeptide-associated complex NAC domainPFAMPF01849NACcoord: 43..99
e-value: 7.7E-20
score: 70.7
IPR002715Nascent polypeptide-associated complex NAC domainPROSITEPS51151NAC_ABcoord: 40..105
score: 17.728737
IPR038187NAC A/B domain superfamilyGENE3D2.20.70.30coord: 55..112
e-value: 4.4E-25
score: 89.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..216
IPR039370Transcription factor BTF3PANTHERPTHR10351TRANSCRIPTION FACTOR BTF3 FAMILY MEMBERcoord: 11..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_329_length_29763_cov_4.543981contigNODE_329_length_29763_cov_4.543981:18852..19502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8619.t1Gcaud8619.t1Gracilaria caudata M_176_S67 malemRNANODE_329_length_29763_cov_4.543981 18852..19502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8619.t1 ID=Gcaud8619.t1|Name=Gcaud8619.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=217bp
MEGGIDKEKLAKLQRMAAGVRVGGKGSVRRKKKAVHKAAPTDDKRLQTTL
KRLQLSHLPGIEEVNIFRDNGQVINFQNPKVQAQISANTYVVSGQAVTKP
LQDMLPSIVNQLGADNMPQMKSLMDQLGAAGIGGQAPPLRKSASIEINEE
EIPDLVGADNFEEKATAEAAKDETAGAKDETAVATEETPAAENGENANGE
DKPAEGGEQEAEQLAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002715Nas_poly-pep-assoc_cplx_dom
IPR038187NAC_A/B_dom_sf
IPR039370BTF3