Gcaud854.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud854.t1
Unique NameGcaud854.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length146
Homology
BLAST of Gcaud854.t1 vs. uniprot
Match: A0A2V3IH70_9FLOR (Histone deacetylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH70_9FLOR)

HSP 1 Score: 256 bits (653), Expect = 7.200e-82
Identity = 111/145 (76.55%), Postives = 128/145 (88.28%), Query Frame = 0
Query:    1 MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFRPVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFNIPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYF 145
            MTVSFHKYGDNFFPGTGSIWD GFGKG+YYAVN PLKDGM+D+SYE  F+P+V+KV+EMFRPSA+VLQ G D LA D+LGSFNMT+KGHANC+QFVK+F IP LVLGGGG N+CN ARCW YETG+LL+   D+ IP+NDYWEYF
Sbjct:  190 MTVSFHKYGDNFFPGTGSIWDHGFGKGEYYAVNVPLKDGMDDESYESLFKPIVQKVMEMFRPSAVVLQCGADSLANDTLGSFNMTIKGHANCLQFVKEFGIPTLVLGGGGYNICNVARCWAYETGVLLDTALDDTIPFNDYWEYF 334          
BLAST of Gcaud854.t1 vs. uniprot
Match: R7QHU9_CHOCR (Histone deacetylase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHU9_CHOCR)

HSP 1 Score: 228 bits (580), Expect = 7.400e-71
Identity = 97/145 (66.90%), Postives = 119/145 (82.07%), Query Frame = 0
Query:    1 MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFRPVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFNIPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYF 145
            MTVSFHK+GD FFPGTG +WD G G G+YYAVNFPLKDG++D +YE  F+P+++KV+EMF+PSA+VLQ G D LA D LG FN+T+KGH  CVQFVK FNIP LVLGGGG N+ + ARCWVYET +LL+   D+ IP+NDYW+YF
Sbjct:  192 MTVSFHKFGDMFFPGTGDVWDKGSGAGEYYAVNFPLKDGIDDDNYERVFQPIIQKVMEMFQPSAVVLQCGADSLANDRLGCFNLTIKGHGKCVQFVKSFNIPTLVLGGGGYNIRSVARCWVYETALLLDTAIDDTIPFNDYWQYF 336          
BLAST of Gcaud854.t1 vs. uniprot
Match: M2X5B7_GALSU (Histone deacetylase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X5B7_GALSU)

HSP 1 Score: 227 bits (578), Expect = 1.100e-70
Identity = 99/145 (68.28%), Postives = 118/145 (81.38%), Query Frame = 0
Query:    1 MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFRPVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFNIPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYF 145
            MTVSFHKYGDNFFPGTG IWD G G G+YYAVN PLKDG++D+SY   F+PVV KV E F+PSA+VLQ G D LA+D LG FN+T+KGHA CVQFVK F +PMLV+GGGG N+ + ARCW++ET +LL+   D+ IPYNDYWEYF
Sbjct:  193 MTVSFHKYGDNFFPGTGDIWDKGSGAGEYYAVNVPLKDGIDDESYFQIFKPVVEKVFETFQPSAVVLQCGTDSLARDRLGGFNLTVKGHARCVQFVKSFGVPMLVVGGGGYNIRSVARCWLHETSVLLDREVDDRIPYNDYWEYF 337          
BLAST of Gcaud854.t1 vs. uniprot
Match: A0A2V3IJP0_9FLOR (Histone deacetylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJP0_9FLOR)

HSP 1 Score: 226 bits (576), Expect = 2.950e-70
Identity = 97/145 (66.90%), Postives = 117/145 (80.69%), Query Frame = 0
Query:    1 MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFRPVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFNIPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYF 145
            MTVSFHK+GD FFPGTG +WD G G G+YYAVNFPLKDG++D +YE  F PV+ KV+EMF+PSA+VLQ G D LA D LG FN+T+KGH  CVQFVK+FNIP LVLGGGG N+ + ARCW YET +LL+   D+ IP+NDYW+YF
Sbjct:  192 MTVSFHKFGDMFFPGTGDVWDKGSGAGEYYAVNFPLKDGIDDDNYERVFEPVIHKVMEMFQPSAVVLQCGADSLAHDRLGCFNLTIKGHGRCVQFVKRFNIPTLVLGGGGYNIRSVARCWAYETALLLDTAVDDRIPFNDYWQYF 336          
BLAST of Gcaud854.t1 vs. uniprot
Match: UPI001E1D7B69 (histone deacetylase 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D7B69)

HSP 1 Score: 221 bits (564), Expect = 1.920e-68
Identity = 95/145 (65.52%), Postives = 116/145 (80.00%), Query Frame = 0
Query:    1 MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFRPVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFNIPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYF 145
            MT SFHK+GD FFPGTG +WD G G G YYAVNFPLKDG++D+SYE  F+PV++KV+E+FRPS +VLQ G D LA D LG FN+T+KGHA CV+FVK F IP LVLGGGG N+ + ARCW YET +LL+   D+ IPYNDYW+Y+
Sbjct:  192 MTASFHKFGDGFFPGTGDVWDKGSGSGTYYAVNFPLKDGIDDESYERVFQPVIQKVMEVFRPSVVVLQCGADSLANDRLGCFNLTIKGHAKCVKFVKGFGIPTLVLGGGGYNIRSVARCWAYETAVLLDTEIDDAIPYNDYWQYY 336          
BLAST of Gcaud854.t1 vs. uniprot
Match: A0A7S0ZKD1_9RHOD (Histone deacetylase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKD1_9RHOD)

HSP 1 Score: 216 bits (551), Expect = 2.360e-68
Identity = 98/145 (67.59%), Postives = 114/145 (78.62%), Query Frame = 0
Query:    1 MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFRPVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFNIPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYF 145
            MT+SFHK+GD FFPGTG IWD G G G+ YAVNFPLKDG++D+SY+  F PVV KV+E+FRPSAIVLQ G D LA+D LG FN+T +GHANCV FVK FN+P LVLGGGG N+ + ARCWV ET  +L    D  IPYNDYWEYF
Sbjct:   35 MTLSFHKFGDMFFPGTGDIWDKGSGVGESYAVNFPLKDGIDDESYQDIFVPVVNKVMEVFRPSAIVLQCGADSLAQDRLGCFNLTTRGHANCVSFVKSFNVPTLVLGGGGYNIRSVARCWVNETATVLGQELDTRIPYNDYWEYF 179          
BLAST of Gcaud854.t1 vs. uniprot
Match: A0A5J4Z4Y8_PORPP (Histone deacetylase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Y8_PORPP)

HSP 1 Score: 223 bits (569), Expect = 3.940e-68
Identity = 98/145 (67.59%), Postives = 118/145 (81.38%), Query Frame = 0
Query:    1 MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFRPVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFNIPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYF 145
            MT+SFHK+GDNFFPGTG IWD G G G+YYAVNFPLKDG++D+SY+  F PVV KVIE+F+PSAIVLQ G D LA+D LG FN+T +GHANCV+FV+  NIP+LV+GGGG N+ + ARCWV ETG+ L    +  IPYNDYWEYF
Sbjct:  290 MTLSFHKFGDNFFPGTGDIWDKGAGSGEYYAVNFPLKDGIDDESYDQTFVPVVSKVIEVFQPSAIVLQCGADSLAQDRLGCFNLTTRGHANCVRFVRSLNIPLLVVGGGGYNIRSVARCWVNETGVCLGTELENRIPYNDYWEYF 434          
BLAST of Gcaud854.t1 vs. uniprot
Match: A0A7J7IED7_9RHOD (Histone deacetylase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IED7_9RHOD)

HSP 1 Score: 218 bits (554), Expect = 6.080e-67
Identity = 94/145 (64.83%), Postives = 113/145 (77.93%), Query Frame = 0
Query:    1 MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFRPVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFNIPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYF 145
            +TVSFHKYGDNFFPGTG +WD GFG+G+ YAVN PLKDGM+D S+   F P+V K IE+++P AIV+Q G D LA D LG FN+T++GHAN V FV+ F +PMLVLGGGG N+ N ARCW+YET +LL    D  IPYNDYWEYF
Sbjct:  203 LTVSFHKYGDNFFPGTGDVWDRGFGRGEGYAVNVPLKDGMDDASFARIFEPIVTKAIEVYQPGAIVMQCGADSLAHDRLGCFNLTVQGHANAVAFVRSFQLPMLVLGGGGYNIRNVARCWLYETSVLLGTPADAQIPYNDYWEYF 347          
BLAST of Gcaud854.t1 vs. uniprot
Match: A0A7S3A3U2_9RHOD (Histone deacetylase (Fragment) n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3U2_9RHOD)

HSP 1 Score: 214 bits (545), Expect = 6.590e-66
Identity = 93/145 (64.14%), Postives = 114/145 (78.62%), Query Frame = 0
Query:    1 MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFRPVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFNIPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYF 145
            MTVSFHK+GD FFPGTG IWD G G G+YYAVNFPLKDG+ D+SY   F+PV+RKV+E+F+PSA+VLQ G D LA D LG FN+T KGH  CV+FVK F IP LVLGGGG  + + ARCW +ET +LL++   + IPYND+W+YF
Sbjct:  190 MTVSFHKFGDMFFPGTGDIWDKGAGSGEYYAVNFPLKDGITDESYRQNFQPVIRKVMEIFQPSAVVLQCGADSLAGDRLGCFNLTTKGHGECVRFVKSFGIPTLVLGGGGYKIRSVARCWTHETSVLLDSEISDRIPYNDFWDYF 334          
BLAST of Gcaud854.t1 vs. uniprot
Match: M1UWQ0_CYAM1 (Histone deacetylase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UWQ0_CYAM1)

HSP 1 Score: 215 bits (547), Expect = 6.810e-66
Identity = 92/145 (63.45%), Postives = 113/145 (77.93%), Query Frame = 0
Query:    1 MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFRPVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFNIPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYF 145
            +TVSFHKYGDNFFPGTG +WD G+G+G+ YAVN PLKDGM+D  +   F P++ KVIE+++P AIV+Q G D LA D LG FN+T++GHAN V FV+ F IPMLVLGGGG N+ N ARCW++ET +LL    D  IPYNDYWEYF
Sbjct:  203 LTVSFHKYGDNFFPGTGDVWDRGYGRGEGYAVNVPLKDGMDDAGFSRIFEPIITKVIEVYQPGAIVMQCGADSLAHDRLGCFNLTVQGHANAVAFVRSFRIPMLVLGGGGYNIRNVARCWLFETSVLLGISVDAQIPYNDYWEYF 347          
The following BLAST results are available for this feature:
BLAST of Gcaud854.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH70_9FLOR7.200e-8276.55Histone deacetylase n=1 Tax=Gracilariopsis chorda ... [more]
R7QHU9_CHOCR7.400e-7166.90Histone deacetylase n=1 Tax=Chondrus crispus TaxID... [more]
M2X5B7_GALSU1.100e-7068.28Histone deacetylase n=1 Tax=Galdieria sulphuraria ... [more]
A0A2V3IJP0_9FLOR2.950e-7066.90Histone deacetylase n=1 Tax=Gracilariopsis chorda ... [more]
UPI001E1D7B691.920e-6865.52histone deacetylase 1-like n=1 Tax=Mercenaria merc... [more]
A0A7S0ZKD1_9RHOD2.360e-6867.59Histone deacetylase n=1 Tax=Timspurckia oligopyren... [more]
A0A5J4Z4Y8_PORPP3.940e-6867.59Histone deacetylase n=1 Tax=Porphyridium purpureum... [more]
A0A7J7IED7_9RHOD6.080e-6764.83Histone deacetylase n=1 Tax=Cyanidiococcus yangmin... [more]
A0A7S3A3U2_9RHOD6.590e-6664.14Histone deacetylase (Fragment) n=3 Tax=Rhodosorus ... [more]
M1UWQ0_CYAM16.810e-6663.45Histone deacetylase n=1 Tax=Cyanidioschyzon merola... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003084Histone deacetylasePRINTSPR01271HISDACETLASEcoord: 40..58
score: 41.9
coord: 23..36
score: 65.66
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20Histone deacetylase domaincoord: 1..146
e-value: 8.7E-47
score: 161.7
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 1..124
e-value: 7.1E-31
score: 107.7
NoneNo IPR availablePANTHERPTHR10625HISTONE DEACETYLASEcoord: 1..145
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 1..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_11743_length_474_cov_4.577023contigNODE_11743_length_474_cov_4.577023:2..437 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud854.t1Gcaud854.t1Gracilaria caudata M_176_S67 malemRNANODE_11743_length_474_cov_4.577023 2..437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud854.t1 ID=Gcaud854.t1|Name=Gcaud854.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=146bp
MTVSFHKYGDNFFPGTGSIWDIGFGKGDYYAVNFPLKDGMNDQSYEHAFR
PVVRKVIEMFRPSAIVLQYGVDGLAKDSLGSFNMTMKGHANCVQFVKQFN
IPMLVLGGGGCNMCNFARCWVYETGILLNAVPDENIPYNDYWEYFX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003084His_deacetylse_1
IPR037138His_deacetylse_dom_sf
IPR023801His_deacetylse_dom
IPR023696Ureohydrolase_dom_sf