Gcaud8534.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8534.t1
Unique NameGcaud8534.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length217
Homology
BLAST of Gcaud8534.t1 vs. uniprot
Match: A0A2V3J6Q9_9FLOR (Nicotinamidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Q9_9FLOR)

HSP 1 Score: 249 bits (635), Expect = 3.520e-81
Identity = 117/184 (63.59%), Postives = 145/184 (78.80%), Query Frame = 0
Query:    1 MRSSDSALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYMSKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGAQFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVSTVHICGLATDVCVLFTVMDAITLGYHTVIVSDAC 184
            M  + SAL++VDVQNDFLPTG+L VP GD V+P+IN L++ I+F GGV+MSKDWHP  HTSFASNH  K  F+     +D   Y QT+WPDHCVQ+S GA FA +LQ+ +NAVTILKGMDPRYDSYSAF+DNA+   ++L  LLK A+V TV++CGLA DVCVLFTVMDA+ LG+ TV++ DAC
Sbjct:    1 MTLTHSALLVVDVQNDFLPTGALPVPDGDGVVPIINALMSRINFGGGVFMSKDWHPPNHTSFASNHNNKKPFEQQTFYVDETPYVQTLWPDHCVQNSPGALFAPSLQVPENAVTILKGMDPRYDSYSAFFDNARNAQSSLQELLKKASVRTVYVCGLALDVCVLFTVMDALDLGFETVLLLDAC 184          
BLAST of Gcaud8534.t1 vs. uniprot
Match: R7QE05_CHOCR (Isochorismatase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE05_CHOCR)

HSP 1 Score: 209 bits (532), Expect = 3.970e-65
Identity = 109/208 (52.40%), Postives = 137/208 (65.87%), Query Frame = 0
Query:    6 SALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYMSKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGAQFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVSTVHICGLATDVCVLFTVMDAITLGYHTVIVSDACRGLSPESTDQAVSKMKAAGAKVVTAAELE 213
            SAL+IVDVQ DFLP GSLAVPQGD+V+ +IN L     F  GV++SKDWHP TH SF +NH  +   +   +      + QT+WP HCVQ + GA+FA  L +      ILKG    +DSYSAF+DN KK  T L   L    V T+++CGLA DVCVLFTV+DA+ LGY+TV++ DA R LS  S D A+SKM+ AGA V T  E+E
Sbjct:   12 SALLIVDVQRDFLPEGSLAVPQGDEVVSIINSLRARATFPCGVFLSKDWHPPTHVSFCNNHGAEPFSEKTLVS----GHRQTLWPPHCVQGTRGAEFAGGLVVEMGDKVILKGTHEEHDSYSAFFDNLKKHQTELHQCLTVEGVDTLYVCGLALDVCVLFTVLDAVALGYNTVLLEDASRALSRASHDSAISKMRDAGATVSTTREVE 215          
BLAST of Gcaud8534.t1 vs. uniprot
Match: A0A7C5G0Q9_9BACT (Bifunctional nicotinamidase/pyrazinamidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5G0Q9_9BACT)

HSP 1 Score: 199 bits (505), Expect = 4.310e-61
Identity = 104/208 (50.00%), Postives = 138/208 (66.35%), Query Frame = 0
Query:    7 ALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYMSKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGAQFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVSTVHICGLATDVCVLFTVMDAITLGYHTVIVSDACRG--LSPESTDQAVSKMKAAGAKVVTAAEL 212
            ALIIVDVQNDF P GSL VP+G  V+PVIN +     F   +  ++DWHP+ H SFA+NHPGK+  D V   +DG+   Q +WP HCVQ S GA+F   L ++  +  + KG DPR DSYS F+DNA++  T L  +L+ A V  V +CGLATD CV +T +DA  LG+ T +++DACRG  L PE   +A+ +M+AAG K+VTA  L
Sbjct:    5 ALIIVDVQNDFCPGGSLPVPEGHTVVPVINRIQPCFEF---IVATQDWHPADHVSFAANHPGKSVGDVVV--VDGIS--QILWPVHCVQGSPGAEFHPELDLSRISRIVRKGTDPRIDSYSGFFDNARRRDTGLAQILREAGVKEVFVCGLATDYCVKYTALDAKELGFETFVITDACRGVGLQPEDIPKAIQEMEAAGIKMVTADRL 205          
BLAST of Gcaud8534.t1 vs. uniprot
Match: A0A3M1QHI2_9BACT (Bifunctional nicotinamidase/pyrazinamidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1QHI2_9BACT)

HSP 1 Score: 194 bits (494), Expect = 2.410e-59
Identity = 100/208 (48.08%), Postives = 132/208 (63.46%), Query Frame = 0
Query:    1 MRSSDSALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYMSKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGAQFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVSTVHICGLATDVCVLFTVMDAITLGYHTVIVSDACRG--LSPESTDQAVSKMKAAGAKV 206
            M     AL++VDVQ DFLP G+LAVP GD+V+PVIN L+        V  ++DWHP  H SFA+NHPG+  F++  IE+DG    QT+WP HCVQ S GA FA  L++   A    KG+DPR DSYS F+DN     T L   L+   V TVH+CGLATD CV FT +DA+  G+  V+++DACRG  L+P   D  ++++K  G  +
Sbjct:    4 MLDRQHALVVVDVQRDFLPGGALAVPHGDEVVPVINRLMPRFEL---VVATQDWHPPDHVSFAANHPGREPFES--IELDGAP--QTLWPTHCVQESTGADFAPGLKVEHFARVFRKGVDPRCDSYSGFFDNRHAHDTGLAGYLREHGVKTVHVCGLATDYCVRFTALDALDEGFDVVLIADACRGVDLNPGDIDNTLAELKRRGVAI 204          
BLAST of Gcaud8534.t1 vs. uniprot
Match: A0A2G6M8F6_9DELT (Nicotinamidase/pyrazinamidase n=1 Tax=Desulfobulbus propionicus TaxID=894 RepID=A0A2G6M8F6_9DELT)

HSP 1 Score: 193 bits (491), Expect = 6.250e-59
Identity = 103/211 (48.82%), Postives = 139/211 (65.88%), Query Frame = 0
Query:    7 ALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYMSKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGAQFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVSTVHICGLATDVCVLFTVMDAITLGYHTVIVSDACRGLSPESTD--QAVSKMKAAGAKVVTAAELEQQ 215
            AL++VD+QNDF P G+LAVP+GD V+PV N L+           +KDWHP  H SFAS H  +  FDT    ID     Q +WPDHC+Q S GA F   L  A     +LKG DP  DSYSAF+DNA++ HT+LD+ L+   V+ ++ CGLATD CVLF+V+D + LGY   +VSD CRG++ E  D  +A+++M AAGA+V++A ++ QQ
Sbjct:    5 ALLLVDIQNDFCPGGALAVPEGDAVVPVANRLMQCFQRR---IATKDWHPKGHISFASRHQ-RPLFDT----IDTPAGPQPLWPDHCIQESRGAAFHPELDAARIDHVVLKGTDPEIDSYSAFFDNARQQHTDLDAYLRRHKVTELYCCGLATDYCVLFSVLDGLELGYKVTVVSDGCRGVNVEQEDSNKALTRMVAAGARVMSAGDVLQQ 207          
BLAST of Gcaud8534.t1 vs. uniprot
Match: A0A847YF23_9BACT (Bifunctional nicotinamidase/pyrazinamidase n=1 Tax=Thermogutta sp. TaxID=1962930 RepID=A0A847YF23_9BACT)

HSP 1 Score: 193 bits (490), Expect = 8.850e-59
Identity = 102/209 (48.80%), Postives = 132/209 (63.16%), Query Frame = 0
Query:    1 MRSSDSALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYMSKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGAQFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVSTVHICGLATDVCVLFTVMDAITLGYHTVIVSDACRG--LSPESTDQAVSKMKAAGAKVV 207
            M     ALI+VDVQNDF P G+LAVPQGD+++PV+N L         V  ++DWHP+ H SFA+NHPGK   D +  E DG    Q +WP HCVQ S GA F   L     A    KG DPR DSYS F+DN ++  T L   L+ + V+ V++CGLATD CV +TV+DA+ LGY T ++ DACRG  L P   ++A  +M AAGA++V
Sbjct:    1 MNPGKPALIVVDVQNDFCPGGALAVPQGDEIVPVVNRLAERFPI---VVATQDWHPADHVSFAANHPGKQPGDVIVWE-DG---PQILWPVHCVQDSAGAAFHPQLNAGRFARVFRKGTDPRIDSYSGFFDNRRRHATGLHEFLRQSGVNQVYVCGLATDYCVKWTVLDALALGYRTAVIRDACRGVGLQPGDVEKAFREMAAAGAELV 202          
BLAST of Gcaud8534.t1 vs. uniprot
Match: A0A2E3LVV3_9BACT (Nicotinamidase/pyrazinamidase n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3LVV3_9BACT)

HSP 1 Score: 191 bits (484), Expect = 5.240e-58
Identity = 97/208 (46.63%), Postives = 138/208 (66.35%), Query Frame = 0
Query:    7 ALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYMSKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGAQFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVSTVHICGLATDVCVLFTVMDAITLGYHTVIVSDACRG--LSPESTDQAVSKMKAAGAKVVTAAEL 212
            AL++VD+QNDFLP G+LAVP GD+++P++N ++    +   +  SKDWHP  H SFA++HP K   +   I+++G+   Q +WP HCVQ++ GA FA  L        + KG DP  DSYSAF+DN ++  T LDSLLK   V  +++ GLATD CV F+V+DA+ LGY T ++ DACRG  L    T  AV +M+ AGAK++ +A+L
Sbjct:    3 ALLLVDIQNDFLPGGALAVPHGDEIVPIVNKIMEKFDY---IVASKDWHPEGHGSFATSHPNKQVGEV--IDLNGLP--QILWPVHCVQNTEGADFAPLLDKEKIQELVFKGCDPSVDSYSAFFDNGQRQKTELDSLLKKKGVKELYVLGLATDYCVKFSVLDAVNLGYQTFLIEDACRGVDLKEGDTPAAVEEMRQAGAKIIHSADL 203          
BLAST of Gcaud8534.t1 vs. uniprot
Match: A0A6I7PA50_9SPIO (Bifunctional nicotinamidase/pyrazinamidase n=1 Tax=Spirochaetaceae bacterium TaxID=1898206 RepID=A0A6I7PA50_9SPIO)

HSP 1 Score: 190 bits (482), Expect = 1.390e-57
Identity = 103/209 (49.28%), Postives = 138/209 (66.03%), Query Frame = 0
Query:    6 SALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYMSKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGAQFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVSTVHICGLATDVCVLFTVMDAITLGYHTVIVSDACRGLSPES--TDQAVSKMKAAGAKVVTAAEL 212
            SA+I+VDVQ DF P G+LAV QGD V+PVIN L   + +   V  +KDWHP+ H SFAS+H GK  FD+V +  DG    Q +WPDHCVQ + G++F  +L      V + KG +PR DSYSAF++N K+T T L  LL+     T+ ICGLATDVCV FT MDA  LG+   +V DACRG+   S     A++++++AG ++V +AEL
Sbjct:    9 SAMIVVDVQRDFCPGGALAVDQGDQVVPVINALAPRVAY---VAATKDWHPAGHVSFASSHSGKKPFDSVEL-ADGTS--QILWPDHCVQATPGSEFQPDLDTRPLDVILHKGANPRLDSYSAFFENDKRTSTGLVHLLRGNGFDTLLICGLATDVCVFFTAMDARKLGFSVYVVEDACRGVDVPSGSVQNALTELRSAGCQIVHSAEL 211          
BLAST of Gcaud8534.t1 vs. uniprot
Match: A0A6C1RTU8_9SPIO (Bifunctional nicotinamidase/pyrazinamidase n=1 Tax=Spirochaetaceae bacterium TaxID=1898206 RepID=A0A6C1RTU8_9SPIO)

HSP 1 Score: 189 bits (481), Expect = 1.970e-57
Identity = 105/211 (49.76%), Postives = 133/211 (63.03%), Query Frame = 0
Query:    6 SALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYMSKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGAQFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVSTVHICGLATDVCVLFTVMDAITLGYHTVIVSDACRGLSPE--STDQAVSKMKAAGAKVVTAAELEQ 214
            SA+IIVDVQ DF P G+LAV  GD V+PVIN L     F   V  +KDWHP  H SFA  HPGK  FDTV  E+ G    Q +WP HCVQ S GA+F   L +    V + KG+ P+ DSYSAF++N KKT T LD LL+     T+ +CGLATDVCV FT  DA+ LG+   ++ DACRG+     S D A+S ++ +G  V+ ++EL Q
Sbjct:    9 SAMIIVDVQQDFCPGGALAVQDGDHVVPVINWLAPRFAF---VVATKDWHPEGHVSFAPMHPGKQPFDTV--ELSGGT-SQILWPVHCVQASPGAEFHPELDLRPINVVLHKGVRPQLDSYSAFFENDKKTSTGLDHLLRGHGFDTLFVCGLATDVCVYFTAADALKLGFSVYLIEDACRGVDVPAGSIDSALSDLRGSGCNVIQSSELLQ 213          
BLAST of Gcaud8534.t1 vs. uniprot
Match: A0A2U2BEJ8_9BACT (Bifunctional nicotinamidase/pyrazinamidase n=1 Tax=Marinilabilia rubra TaxID=2162893 RepID=A0A2U2BEJ8_9BACT)

HSP 1 Score: 189 bits (479), Expect = 2.990e-57
Identity = 103/208 (49.52%), Postives = 136/208 (65.38%), Query Frame = 0
Query:    7 ALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYMSKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGAQFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVSTVHICGLATDVCVLFTVMDAITLGYHTVIVSDACRGLS--PESTDQAVSKMKAAGAKVVTAAEL 212
            AL+IVDVQNDFLP GSL VPQGD +IPVIN+L    HF   V  ++DWHP+ H+SF SNHPG    DT  I++DG+  DQ +WPDHC+Q S GA+ +H L  +       KG DP  DSYSAF+DN  K  T L   LK   V+ ++I GLA DVCV FTV DA+ LGY T +++DA +G++  P  T +A+  M   GA ++ + ++
Sbjct:    3 ALLIVDVQNDFLPGGSLEVPQGDSIIPVINNLQN--HFDL-VVATRDWHPANHSSFGSNHPGHKVGDT--IKLDGI--DQILWPDHCIQGSPGAELSHKLNQSMIERVFFKGKDPNVDSYSAFFDNGHKIQTELHDYLKKKGVTELYITGLAADVCVYFTVKDALQLGYATSLITDATKGVNMQPGDTQKALEDMADNGANLMESKDI 203          
The following BLAST results are available for this feature:
BLAST of Gcaud8534.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6Q9_9FLOR3.520e-8163.59Nicotinamidase n=1 Tax=Gracilariopsis chorda TaxID... [more]
R7QE05_CHOCR3.970e-6552.40Isochorismatase domain-containing protein n=1 Tax=... [more]
A0A7C5G0Q9_9BACT4.310e-6150.00Bifunctional nicotinamidase/pyrazinamidase n=1 Tax... [more]
A0A3M1QHI2_9BACT2.410e-5948.08Bifunctional nicotinamidase/pyrazinamidase n=1 Tax... [more]
A0A2G6M8F6_9DELT6.250e-5948.82Nicotinamidase/pyrazinamidase n=1 Tax=Desulfobulbu... [more]
A0A847YF23_9BACT8.850e-5948.80Bifunctional nicotinamidase/pyrazinamidase n=1 Tax... [more]
A0A2E3LVV3_9BACT5.240e-5846.63Nicotinamidase/pyrazinamidase n=1 Tax=Waddliaceae ... [more]
A0A6I7PA50_9SPIO1.390e-5749.28Bifunctional nicotinamidase/pyrazinamidase n=1 Tax... [more]
A0A6C1RTU8_9SPIO1.970e-5749.76Bifunctional nicotinamidase/pyrazinamidase n=1 Tax... [more]
A0A2U2BEJ8_9BACT2.990e-5749.52Bifunctional nicotinamidase/pyrazinamidase n=1 Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000868Isochorismatase-likePFAMPF00857Isochorismatasecoord: 6..211
e-value: 3.7E-38
score: 131.4
IPR036380Isochorismatase-like superfamilyGENE3D3.40.50.850coord: 3..215
e-value: 2.1E-72
score: 245.6
IPR036380Isochorismatase-like superfamilySUPERFAMILY52499Isochorismatase-like hydrolasescoord: 4..214
NoneNo IPR availablePANTHERPTHR11080:SF2LD05707Pcoord: 3..214
NoneNo IPR availablePANTHERPTHR11080PYRAZINAMIDASE/NICOTINAMIDASEcoord: 3..214
NoneNo IPR availableCDDcd01011nicotinamidasecoord: 6..207
e-value: 9.32777E-80
score: 235.236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_907_length_16250_cov_3.969800contigNODE_907_length_16250_cov_3.969800:14025..14922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8534.t1Gcaud8534.t1Gracilaria caudata M_176_S67 malemRNANODE_907_length_16250_cov_3.969800 14025..14922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8534.t1 ID=Gcaud8534.t1|Name=Gcaud8534.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=217bp
MRSSDSALIIVDVQNDFLPTGSLAVPQGDDVIPVINHLVTTIHFTGGVYM
SKDWHPSTHTSFASNHPGKTHFDTVAIEIDGVQYDQTMWPDHCVQHSHGA
QFAHNLQIADNAVTILKGMDPRYDSYSAFYDNAKKTHTNLDSLLKNANVS
TVHICGLATDVCVLFTVMDAITLGYHTVIVSDACRGLSPESTDQAVSKMK
AAGAKVVTAAELEQQV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000868Isochorismatase-like
IPR036380Isochorismatase-like_sf