Gcaud8529.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8529.t1
Unique NameGcaud8529.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length266
Homology
BLAST of Gcaud8529.t1 vs. uniprot
Match: A0A2V3IE76_9FLOR (Zinc finger protein CONSTANS-LIKE 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE76_9FLOR)

HSP 1 Score: 362 bits (929), Expect = 7.730e-124
Identity = 202/270 (74.81%), Postives = 233/270 (86.30%), Query Frame = 0
Query:    1 MVRNCEMCPEDHAVMATVYCAADACYLCAKCDTEVHSANRLAQRHVRSAVAACEMEGSSIHDESEEALVPDVNRLQ-DDTDTLTFEDAADYDFSELGLGRMPGLTSVEDMGIWGEGKLDKNWDVNWEQVVQDDFVHVVPDMEPRSDRIVEDS-----IKVEPTVVSEKKELRLGVKRSREQEHQAVDEXXXXXXXXXXXXXXKEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGNMYREHLHELESSNGS 264
            MVRNCEMCPEDHAVMATVYCAADACYLCAKCD EVHSANRLAQRHVRSAV+ACE++GSSIHDES+E +VPD+  ++ +++ TLTFEDAADYDF ELGLGRMPGL  VE++GIWGEGKL KNWD++WE VV+D F HVVPD+E R+ +  + +     +K+E  +V +KKE+R+G KR+RE        XXXXXXXXXXXXXXKEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGN+YREHLHEL+S + S
Sbjct:    1 MVRNCEMCPEDHAVMATVYCAADACYLCAKCDIEVHSANRLAQRHVRSAVSACELDGSSIHDESDEGIVPDIAHIRHEESTTLTFEDAADYDFGELGLGRMPGLAGVEEIGIWGEGKLGKNWDLSWEDVVEDGFDHVVPDVESRNQKAEDVAAAVVVVKME-ALVEDKKEVRIGEKRAREXXXXXXX-XXXXXXXXXXXXXXKEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGNLYREHLHELDSGSAS 268          
BLAST of Gcaud8529.t1 vs. uniprot
Match: R7QFM0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFM0_CHOCR)

HSP 1 Score: 202 bits (515), Expect = 5.250e-60
Identity = 162/342 (47.37%), Postives = 196/342 (57.31%), Query Frame = 0
Query:    1 MVRNCEMCPEDHAVMATVYCAADACYLCAKCDTEVHSANRLAQRHVRSAVAACEM-EGSSIHDESEEALVPDVNRLQD--------DTDTL---------TFEDAADYDFS-ELGLG-RMPGLTSVEDMGIW-GEGKLDKNW--DVNWEQVVQDDFVHVVPD-------------------MEPRSDRIVEDSI------------------------------KVEPTV-VSEKKELRLGVKRSREQEHQA--------VDEXXXXXXXXXXXXXXKEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGNMYREHLHELESS 261
            MVR CE+CPE  A  A VYC ADAC+LC+ CD EVHSANRLA RHVR AVA  +  +GSSI+D+SE ALVPDV  L +          D L         +FEDAA+YDF  E GLG +MP L +++D  ++ G   L K++  D++WE VV ++  HVVPD                   M+  S      S+                              K EPT+ +S       G KRSRE++  +           XXXXXXXXXXXXXX   L RFRSKRANRSF K+VRYECRKQLADSRPRVKGRFVRK+EMAL+RKYG +YREHL ELE +
Sbjct:    1 MVRVCELCPEGKARQAVVYCPADACFLCSACDEEVHSANRLAGRHVRRAVATDDGGDGSSINDDSENALVPDVAELDEGEHSDPSSSEDMLLMSLPIQVPSFEDAAEYDFDFEGGLGGKMPALCAIDDDALFTGTKSLGKSFYGDISWESVVPENIEHVVPDVSAPGMGFFKREAVEVDAPMKVVSSSTAASSVGDLKSQPEVTSISVVNRPGTIVRIDGAVVSKAEPTLSLSSTGSSITGQKRSREEDESSGXXXXXXXXXXXXXXXXXXXXXXXXXXXLARFRSKRANRSFTKKVRYECRKQLADSRPRVKGRFVRKIEMALFRKYGALYREHLDELEGA 342          
BLAST of Gcaud8529.t1 vs. uniprot
Match: A0A2V3J5T0_9FLOR (Zinc finger protein CONSTANS-LIKE 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5T0_9FLOR)

HSP 1 Score: 89.7 bits (221), Expect = 1.370e-17
Identity = 86/259 (33.20%), Postives = 111/259 (42.86%), Query Frame = 0
Query:    7 MCPEDHAVMATVYCAADACYLCAKCDTEVHSANRLAQRHVRSAVAACEMEGSSIHDESEEALVPDVNRLQDDTDTLTFEDA-ADYDFSELGLGRMPGLTSVEDM-----------------GIWGEGKLDK-------NWDVNWEQVVQDDFVHVVPDMEPRSDRIVEDSIKVEPTVVSEKKELRLGVKRSREQEHQAVDEXXXXXXXXXXXXXXKE----ALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFV 236
            +C     + A+VYC AD+ YLC  CD  +HSAN+L++RH R            IH+ S   + P  + L D +++ T   A  D   S L  G      SV+D+                 G + + + +        + D    Q+     +H VP    R  R    S      VV     L+     S E       E              K     ALERFR+KRANRSF KRVRY CRKQLADSRPRVKGRFV
Sbjct:    5 LCASCRTIDASVYCQADSAYLCTICDHSIHSANKLSRRHSRIP----------IHNNSFSPIAPSTDTLLDHSESSTLPSAETDNLISILPPGVSSNAFSVDDLLDSIVPQPNDDHLTSMAGAYVKKEAETLLQSSGLSLDAMVPQLDVWSGLHQVPQQPGRRSRPPTSSFDFS-AVVPNMPALQPQPTSSAEPVVPTQSEASSTDDSESIMLKRKRHRLAALERFRNKRANRSFRKRVRYACRKQLADSRPRVKGRFV 252          
BLAST of Gcaud8529.t1 vs. uniprot
Match: A0A1X6P4S3_PORUM (CCT domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4S3_PORUM)

HSP 1 Score: 78.6 bits (192), Expect = 5.420e-13
Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 0
Query:  199 ALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGNMYREHLHELES 260
            A+ RFR+KRA RSF K+V Y  RK LAD RPRVKGRFV +  MALY++YG+ YREHL E+ S
Sbjct:  276 AMSRFRAKRARRSFTKKVMYTVRKDLADVRPRVKGRFVSRTHMALYKRYGDSYREHLDEVGS 337          
BLAST of Gcaud8529.t1 vs. uniprot
Match: A0A835VCS3_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835VCS3_VANPL)

HSP 1 Score: 68.9 bits (167), Expect = 1.320e-9
Identity = 73/261 (27.97%), Postives = 110/261 (42.15%), Query Frame = 0
Query:    8 CPEDHAVMATVYCAADACYLCAKCDTEVHSANRLAQRHVRSAVAACEMEGSSIHDESEEALVPDVNRLQDDTDTLTFEDAADYDFSE---LGLGRMPGLTSVEDMGIWGEGKLDKNWDVNWEQVVQDDFVH---VVPDMEPRSDRIVEDSIKVEPTVVSEKK------------------ELRLGVKRSREQEHQAVDEXXXXXXXXXXXXXXKEA-LERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMAL 243
            C    +V  +VYC ADA YLC  CD  +HSAN LA+RH R  V    + G  +       + P VNR    ++ +  E+  + +  +   LG      L  VE      +G++   W+   +Q   D F     ++   +        + I + P   +EK                   EL LG K    Q+   +D               +EA + R+R KR  R F K +RY  RK  A++RPRVKGRF ++ ++ L
Sbjct:  399 CDSCRSVPCSVYCRADAAYLCGGCDATIHSANSLARRHYRVPVLPITIGGLVV------GMKPTVNRCLRRSEEVAAEEEEEVEVEDGFFLGGEVEDYLDLVEFSSCDDDGQI---WEKEKKQSGGDGFEDEQKLIQSFQTGYGADNTEEISLSPMEGTEKSMTGISSSEIISVPPKAAIELFLGPKLQTAQQFNLMD---------------REARVLRYREKRKTRRFEKIIRYASRKAYAETRPRVKGRFAKRNDVQL 635          
BLAST of Gcaud8529.t1 vs. uniprot
Match: A0A835RT70_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RT70_VANPL)

HSP 1 Score: 66.2 bits (160), Expect = 4.420e-9
Identity = 79/265 (29.81%), Postives = 112/265 (42.26%), Query Frame = 0
Query:    8 CPEDHAVMATVYCAADACYLCAKCDTEVHSANRLAQRHVRSAVAACEMEGSSIHDESEEALVPDVNRLQDDTDTLTFEDAADYDFSELGLGRMPG-----------LTSVEDMG-IWGEGKLDKNWD-VNWEQVVQDDF-----------VHVVPDMEPRSDRIVEDS----IKVEPTVVSEKKELRLGVKRSREQEHQAVDEXXXXXXXXXXXXXXKEA-LERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMAL 243
            C    +V  +VYC ADA YLC  CD  +HSAN LA+RH R  V    + G  +       + P VNR    ++ +  E+    +  E+  G   G            +S +D G IW + K     D    EQ +   F           + + P ME     + + S    I V P    E   L LG K    Q+   +D               +EA + R+R KR  R F K +RY  RK  A++RPRVKGRF ++ ++ L
Sbjct:   18 CDSCRSVPCSVYCRADAAYLCGGCDATIHSANSLARRHYRVPVLPITIGGLVV------GMKPTVNRCLRRSEEVAAEEEXXVEV-EVEDGFFLGGEVEDYLDLVEFSSCDDDGQIWEKEKKQSGGDGFEDEQKLIQSFQTGYGADNTGEISLSP-MEGTEKSMTDISSSEIISVPPKAAIE---LFLGPKLQTAQQFNLMD---------------REARVLRYREKRKTRRFEKIIRYASRKAYAETRPRVKGRFAKRNDVQL 256          
BLAST of Gcaud8529.t1 vs. uniprot
Match: A0A833RC60_9POAL (Uncharacterized protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RC60_9POAL)

HSP 1 Score: 65.1 bits (157), Expect = 1.350e-8
Identity = 72/253 (28.46%), Postives = 102/253 (40.32%), Query Frame = 0
Query:    2 VRNCEMCPEDHAVMATVYCAADACYLCAKCDTEVHSANRLAQRHVR-------SAVAACEM------EGSSIHDESEEALVPDVNRLQDDTDTLTFEDAADYDFSELGLGRMPGLTSVEDMGIWGEGKLDKNWDVNWEQVVQDDFVHVVPDME-PRSDRIVEDSIKVEPTVVSEKKELRLGVKRSREQEHQAVDEXXXXXXXXXXXXXXKEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVE 240
            V  CE+C  + A   +V C ADA  LCA CD ++HSAN LA RHVR       SAV +          G+   DE  EA       L + T     E+   +   E G G + G    +D        +    + +W  +    +  V  +     S    E  +  E T   +++ +   V R                            L R+R KR NR F K +RY  RK  A++RPR+KGRFV++ E
Sbjct:   49 VPLCEVCERNPA---SVSCRADAAALCATCDADIHSANPLASRHVRVPVVPFVSAVGSLAKPMPPVGSGTLFGDEESEAEAA-TWLLAEPTGEAKQEEVVCFGGEEEGYGGLFGEDVKKDWDGGANLSVGVGNEFDWGYINTGLYSPVYQEASFTNSGSSSEAGVVPEATPYEKEQTMYAHVDREAR-------------------------LMRYREKRKNRRFQKTIRYASRKAYAETRPRIKGRFVKREE 272          
BLAST of Gcaud8529.t1 vs. uniprot
Match: A0A1J3EMP2_NOCCA (Zinc finger protein CONSTANS-LIKE 4 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3EMP2_NOCCA)

HSP 1 Score: 60.5 bits (145), Expect = 2.130e-8
Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = 0
Query:  197 KEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMA 242
            KE +E++RSKR  R+F KR++YECRK LADSRPR++GRF R  EM+
Sbjct:   46 KERIEKYRSKRNLRNFNKRIKYECRKTLADSRPRIRGRFARNDEMS 91          
BLAST of Gcaud8529.t1 vs. uniprot
Match: R7QSJ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSJ2_CHOCR)

HSP 1 Score: 64.7 bits (156), Expect = 2.200e-8
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0
Query:  199 ALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFV 236
            AL RFR KRANRSF K+VRY CRKQLADSRPRVKGRFV
Sbjct:  282 ALRRFRHKRANRSFRKKVRYACRKQLADSRPRVKGRFV 319          
BLAST of Gcaud8529.t1 vs. uniprot
Match: UPI0009F4C85E (zinc finger protein CONSTANS-LIKE 2 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F4C85E)

HSP 1 Score: 63.9 bits (154), Expect = 2.810e-8
Identity = 74/258 (28.68%), Postives = 110/258 (42.64%), Query Frame = 0
Query:    8 CPEDHAVMATVYCAADACYLCAKCDTEVHSANRLAQRHVRSAVAACE-----MEGSSIHDESEEALVPDVNRLQDDTDTLTFEDAADYDFSELGLGRMPGLTSVEDMGIWGEGKLDKNWDVNWE---QVVQD------------DFVHVVPDMEPRSDRIVEDSIKVEPTVVSEKKELRLGVKRSR-EQEHQAVDEXXXXXXXXXXXXXXKEA-LERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMAL 243
            C   H++ ++VYC ADA YLC  CD+ +HSAN LA+RH R  +         + G S+    EE    D    ++D D        D  F  +        TS E+     EGK  + +D   E   Q++Q             D+   +P  E  S         +E TVV E   + +   + R  +E   +                +EA + R+R KR  R F K +RY  RK  A++RPR+KGRF ++ +  L
Sbjct:   24 CDSCHSIPSSVYCRADAAYLCTNCDSSIHSANSLARRHHRVPLLPIPAGGLIVGGISVALPKEEE---DEEDPEEDQDGFLIGGEVDEYFDLVEFS-----TSCEE-----EGK--EKYDCREEEEKQMLQSSFNVGEGFKGGIDYSAFLPHTESLS--------SIEGTVVPENSMISISSSQFRTSKETIELFSGPPIQVPQQFSPMDREARVLRYREKRKTRKFQKIIRYASRKAYAETRPRIKGRFAKRTDAEL 258          
The following BLAST results are available for this feature:
BLAST of Gcaud8529.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IE76_9FLOR7.730e-12474.81Zinc finger protein CONSTANS-LIKE 3 n=1 Tax=Gracil... [more]
R7QFM0_CHOCR5.250e-6047.37Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J5T0_9FLOR1.370e-1733.20Zinc finger protein CONSTANS-LIKE 1 n=1 Tax=Gracil... [more]
A0A1X6P4S3_PORUM5.420e-1364.52CCT domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A835VCS3_VANPL1.320e-927.97Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
A0A835RT70_VANPL4.420e-929.81Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
A0A833RC60_9POAL1.350e-828.46Uncharacterized protein n=1 Tax=Carex littledalei ... [more]
A0A1J3EMP2_NOCCA2.130e-863.04Zinc finger protein CONSTANS-LIKE 4 (Fragment) n=1... [more]
R7QSJ2_CHOCR2.200e-886.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI0009F4C85E2.810e-828.68zinc finger protein CONSTANS-LIKE 2 n=1 Tax=Dendro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 172..206
NoneNo IPR availableCDDcd19821Bbox1_BBX-likecoord: 5..47
e-value: 1.2699E-12
score: 58.8483
IPR010402CCT domainPFAMPF06203CCTcoord: 196..238
e-value: 2.5E-18
score: 65.9
IPR010402CCT domainPROSITEPS51017CCTcoord: 196..238
score: 15.50713
IPR045281Zinc finger protein CONSTANS-likePANTHERPTHR31319ZINC FINGER PROTEIN CONSTANS-LIKE 4coord: 2..242
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 3..50
score: 8.986925
IPR001289Nuclear transcription factor Y subunit APROSITEPS51152NFYA_HAP2_2coord: 174..238
score: 9.683796

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4404_length_2299_cov_3.762681contigNODE_4404_length_2299_cov_3.762681:220..1017 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8529.t1Gcaud8529.t1Gracilaria caudata M_176_S67 malemRNANODE_4404_length_2299_cov_3.762681 220..1017 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8529.t1 ID=Gcaud8529.t1|Name=Gcaud8529.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=266bp
MVRNCEMCPEDHAVMATVYCAADACYLCAKCDTEVHSANRLAQRHVRSAV
AACEMEGSSIHDESEEALVPDVNRLQDDTDTLTFEDAADYDFSELGLGRM
PGLTSVEDMGIWGEGKLDKNWDVNWEQVVQDDFVHVVPDMEPRSDRIVED
SIKVEPTVVSEKKELRLGVKRSREQEHQAVDEEEEQKALERRRKRRKEAL
ERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGNM
YREHLHELESSNGSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
IPR045281CONSTANS-like
IPR000315Znf_B-box
IPR001289NFYA