Gcaud8515.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8515.t1
Unique NameGcaud8515.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length134
Homology
BLAST of Gcaud8515.t1 vs. uniprot
Match: A0A2V3IKT1_9FLOR (CMP-sialic acid transporter 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKT1_9FLOR)

HSP 1 Score: 106 bits (264), Expect = 8.750e-25
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 0
Query:    2 GALLNLAVFTNSRVTNQATPAFFEGYNAMAVAVVCSNAFMGVAMNVVYKYADAVVKNIATSTXXXXXXXXXXXXXXXXXXXXXXXXXXIVVMGTYLYFAIGVSEQHLSELQK 113
            GA LN+  F  +R+++  TP F++GY+ MA+ VVCSNAFMG+A+N VYKYADA++KNIATST                          IVV+GTYLYF++GV+EQ L  LQ+
Sbjct:  238 GAALNVVAFVCTRLSDHKTPRFWQGYSLMAMCVVCSNAFMGIAINCVYKYADALIKNIATSTTTVILVVLSAVLFRGRSNVMVFLGAGIVVVGTYLYFSLGVTEQRLQRLQQ 349          
BLAST of Gcaud8515.t1 vs. uniprot
Match: A0A813IYT5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IYT5_POLGL)

HSP 1 Score: 59.3 bits (142), Expect = 6.870e-8
Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    2 GALLNLAVFTNSRVTNQATP-AFFEGY-NAMAVAVVCSNAFMGVAMNVVYKYADAVVKNIAT 61
            G   NL  FT     N +    FF+GY N +A+ VVCSNAF+G+A+N VYKY DAVVK IA+
Sbjct:  125 GVFFNLLAFTCIPNPNSSAEIGFFDGYDNVLAIGVVCSNAFIGLAINAVYKYGDAVVKCIAS 186          
BLAST of Gcaud8515.t1 vs. uniprot
Match: A0A7S0NRV2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NRV2_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 3.640e-7
Identity = 36/103 (34.95%), Postives = 51/103 (49.51%), Query Frame = 0
Query:    2 GALLNLAVFTNSRVTNQATP-AFFEGYNAMAVAVVCSNAFMGVAMNVVYKYADAVVKNIATSTXXXXXXXXXXXXXXXXXXXXXXXXXXIVVMGTYLYFAIGV 103
            G+L+ +  F +SR T+      FFEGY A+A+ +V   AF G+A+  VYKYADA+VKN A S+                          IV++ TY Y  I +
Sbjct:  217 GSLIAIGFFFHSRSTDPGDQKGFFEGYEALAMLLVLFQAFHGIAVAFVYKYADAIVKNFAASSVVALLFVISAYFFAQPTNLHSWCGIVIVLVTTYCYMNIAL 319          
BLAST of Gcaud8515.t1 vs. uniprot
Match: A0A813F8Q9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F8Q9_POLGL)

HSP 1 Score: 57.0 bits (136), Expect = 3.990e-7
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    2 GALLNLAVFTNSRVTNQATP-AFFEGY-NAMAVAVVCSNAFMGVAMNVVYKYADAVVKNIAT 61
            G   NL  FT     N +    FF+GY N +A+ VVCSNAF+G+A+  VYKY DAVVK IA+
Sbjct:   88 GVFFNLLAFTCIPNPNSSAEIGFFDGYDNVLAIGVVCSNAFIGLAITAVYKYGDAVVKCIAS 149          
BLAST of Gcaud8515.t1 vs. uniprot
Match: A0A7S4I4E2_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I4E2_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 6.580e-7
Identity = 38/121 (31.40%), Postives = 55/121 (45.45%), Query Frame = 0
Query:    2 GALLNLAVFTNSRVTNQATPAFFEGYNAMAVAVVCSNAFMGVAMNVVYKYADAVVKNIATSTXXXXXXXXXXXXXXXXXXXXXXXXXXIVVMGTYLYFAIGVSEQHLSELQKARRKASPAS 122
            G+++    + +S  T     AFFEGY  +A+ +V   AF G+A+ +VYKYADA+VKN A S+                          IV+  TY Y  I +       LQ+    A+P S
Sbjct:  192 GSVIATGSYLHSTTTKGHHKAFFEGYTTLALLLVLFQAFHGLAVALVYKYADAIVKNFANSSVMAILIIISYYFFALQTTVHSWLGIVIVLTTTYCYMNIAIG------LQQTEAAAAPKS 306          
BLAST of Gcaud8515.t1 vs. uniprot
Match: T5AD14_OPHSC (UDP-galactose transporter n=2 Tax=Ophiocordyceps sinensis TaxID=72228 RepID=T5AD14_OPHSC)

HSP 1 Score: 57.0 bits (136), Expect = 7.640e-7
Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    2 GALLNLAVFTNSRVTNQATPAFFEGYNAM-AVAVVCSNAFMGVAMNVVYKYADAVVKNIATS 62
            G  +NL      R+     P FFEGY+++ AV VV SN F+G+AM  VYKYA+AVVK IAT+
Sbjct:  161 GVFVNLLCHVVVRIIKTDEPGFFEGYDSIGAVMVVVSNVFIGLAMTSVYKYANAVVKCIATA 222          
BLAST of Gcaud8515.t1 vs. uniprot
Match: A0A813ILA3_POLGL (Hypothetical protein n=6 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ILA3_POLGL)

HSP 1 Score: 56.6 bits (135), Expect = 9.480e-7
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    2 GALLNLAVFTNSRVTNQATP-AFFEGY-NAMAVAVVCSNAFMGVAMNVVYKYADAVVKNIAT 61
            G   NL  FT     N +    FF+GY N +A+ VVCSNAF+G+A+  VYKY DAVVK IA+
Sbjct:  217 GVFFNLLAFTCIPNPNSSAEIGFFDGYDNILAIGVVCSNAFIGLAITAVYKYGDAVVKCIAS 278          
BLAST of Gcaud8515.t1 vs. uniprot
Match: A0A7S0I2J3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I2J3_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 2.170e-6
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0
Query:   21 PAFFEGYNAMAVAVVCSNAFMGVAMNVVYKYADAVVKNIATST 63
            PAFF GYNA+A  +V   AF G+A+ +VYKYADA+VKN A S+
Sbjct:  233 PAFFHGYNALAALLVIFQAFHGLAVALVYKYADAIVKNFANSS 275          
BLAST of Gcaud8515.t1 vs. uniprot
Match: R1F7Q7_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F7Q7_EMIHU)

HSP 1 Score: 55.5 bits (132), Expect = 2.330e-6
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    2 GALLNLAVF--TNSRVTNQATPAFFEGYNA-MAVAVVCSNAFMGVAMNVVYKYADAVVKNIAT 61
            GA LN+  F   ++  + QA   FF+GY++ +AVAVV  N  +G+A+N+VYKYADAV+K IAT
Sbjct:  210 GAALNVTAFFLVSNPSSAQAGLGFFDGYDSPLAVAVVACNTLIGIAINLVYKYADAVLKCIAT 272          
BLAST of Gcaud8515.t1 vs. uniprot
Match: R1DDK5_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DDK5_EMIHU)

HSP 1 Score: 55.5 bits (132), Expect = 2.570e-6
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    2 GALLNLAVF--TNSRVTNQATPAFFEGYNA-MAVAVVCSNAFMGVAMNVVYKYADAVVKNIAT 61
            GA LN+  F   ++  + QA   FF+GY++ +AVAVV  N  +G+A+N+VYKYADAV+K IAT
Sbjct:  376 GAALNVTAFFLVSNPSSAQAGLGFFDGYDSPLAVAVVACNTLIGIAINLVYKYADAVLKCIAT 438          
The following BLAST results are available for this feature:
BLAST of Gcaud8515.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3IKT1_9FLOR8.750e-2548.21CMP-sialic acid transporter 4 n=1 Tax=Gracilariops... [more]
A0A813IYT5_POLGL6.870e-853.23Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S0NRV2_9EUKA3.640e-734.95Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A813F8Q9_POLGL3.990e-751.61Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S4I4E2_9EUKA6.580e-731.40Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
T5AD14_OPHSC7.640e-751.61UDP-galactose transporter n=2 Tax=Ophiocordyceps s... [more]
A0A813ILA3_POLGL9.480e-751.61Hypothetical protein n=6 Tax=Polarella glacialis T... [more]
A0A7S0I2J3_9EUKA2.170e-660.47Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
R1F7Q7_EMIHU2.330e-650.79Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
R1DDK5_EMIHU2.570e-650.79Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007271Nucleotide-sugar transporterPFAMPF04142Nuc_sug_transpcoord: 3..98
e-value: 5.2E-13
score: 48.8
IPR007271Nucleotide-sugar transporterPANTHERPTHR10231NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTERcoord: 2..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..81
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..103
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 27..99
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 26..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2554_length_5327_cov_3.973453contigNODE_2554_length_5327_cov_3.973453:4909..5310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8515.t1Gcaud8515.t1Gracilaria caudata M_176_S67 malemRNANODE_2554_length_5327_cov_3.973453 4909..5310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8515.t1 ID=Gcaud8515.t1|Name=Gcaud8515.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=134bp
MGALLNLAVFTNSRVTNQATPAFFEGYNAMAVAVVCSNAFMGVAMNVVYK
YADAVVKNIATSTTTVLLVIISAAFFGGRDNMMVFLGGGIVVMGTYLYFA
IGVSEQHLSELQKARRKASPASDARSSSTSLSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007271Nuc_sug_transpt