Gcaud851.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud851.t1
Unique Name	Gcaud851.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	565

Homology

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BLAST of Gcaud851.t1 vs. uniprot
Match: A0A2V3J5F6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5F6_9FLOR)

HSP 1 Score: 782 bits (2019), Expect = 7.440e-280
Identity = 389/552 (70.47%), Postives = 456/552 (82.61%), Query Frame = 0

Query:    1 MGVSTSRRAWGGRWSAVYSMWTYIHRLLHLLGIAAVDVEEVALLSAPLVRIRCVRRHRAPVVLAHDPCPMFPDEPLGWVSPSHLHISSTLFFLHFDTSHPQRVDRARIATAAPSDTSPRAWLAVDHKTGIITLTASEMAAAVFHIHLSNAKAAVPQVFLQCTCTAGRYLSVHLPTMRARVCASAVAACETFLINHVPLPPTLAQHRDEPPPQDFTMAAAYQATRSCPLRVQSKAFDWFLASKPGTPVASSRGKESGWEGFILEYDSPTRSAHIRDSRGLYLGFTEQLDQLIAAPDPSAEGTENALNAVHSHHRAERFDVEIVADDELITLRSRKGYLSARRDGRIVLSQHTIPGRREQFYLRLALPSMMDQSTPRLRLRACDGGARQVEASILVPAPAQIGFDVLRDYDGFHEFIHDASESRILERKSDTELTVLMVQCHTFLVLTIPMTLVLNVVEDPERKSVVMDLKSGLGVREYKGVWQASERPDGRCLLRCTLLAATSVPAPGFLLDGLMSHAMFETMKQLRVECIRRSTKDHQSSPTNSSQRRVAGR 552
            MG   +RR WGGRW+AVYS+WTY HR+LH+LGI+AVD EE+ALLSAP+VRIR VRRH   VVLAH P P+FP EP+GWV P+    S+TLFFLHFDTS    +DRARIATAAPSD+ PRAWL VDHKTG ITLTASE++A +F +  SN+++ V  V+LQCTC AGRYLSV   TMRARVC  ++   E FLINHVPLPPTL++H  E PPQD TMAAAY ATRSCPLR+QSKAF WFLASKP  P+A +RG +SGW+ FILEYDSPTRSA IRDSRGLYLGFT+QLD +IAAPDPS+E T+     + + HRAERFDV+ +  D+++T+ SRKGYLSA RDGRIVL  +T+PG+R+ FYLR+ALPSMMD STPRLR+RAC GGARQV+ASIL+PA AQI FDVLRDYDGFHEFIHDASES +LER+S TELTV MVQCHTFLVLTIPMTLVL+VVE+ ER++V MDLK GLG++EYKGVWQA ER DGRCLLRCTL AA +VPAP FLLDGLMSHAM+ TM+QLRVE IRRST + Q++  +  QRR+  R
Sbjct:    1 MGALPNRRPWGGRWTAVYSLWTYFHRVLHILGISAVDTEELALLSAPIVRIRSVRRHHRDVVLAHHPSPLFPHEPIGWVHPADTTFSATLFFLHFDTSDAHHIDRARIATAAPSDSIPRAWLCVDHKTGFITLTASELSATLFEVLPSNSRSPVANVYLQCTCAAGRYLSVDRDTMRARVCGHSMGTREAFLINHVPLPPTLSEHHFEQPPQDCTMAAAYYATRSCPLRIQSKAFGWFLASKPAVPLAIARGNDSGWDRFILEYDSPTRSARIRDSRGLYLGFTDQLDHIIAAPDPSSEHTDEYDLGLTTAHRAERFDVQCIPHDDVVTISSRKGYLSATRDGRIVLCHNTVPGKRQHFYLRIALPSMMDLSTPRLRVRACAGGARQVDASILIPASAQIAFDVLRDYDGFHEFIHDASESGVLERRSPTELTVRMVQCHTFLVLTIPMTLVLDVVENLERRTVSMDLKHGLGIKEYKGVWQAVERSDGRCLLRCTLQAAIAVPAPAFLLDGLMSHAMYSTMEQLRVESIRRSTLEQQAASRHM-QRRIGQR 551

The following BLAST results are available for this feature:

BLAST of Gcaud851.t1 vs. uniprot

BLAST of Gcaud851.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J5F6_9FLOR	7.440e-280	70.47	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.80.10.50		coord: 233..369 e-value: 1.1E-6 score: 30.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 531..564
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 536..564
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..431
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 432..456
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 457..564
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 387..528
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 387..532 e-value: 3.9E-16 score: 61.1
IPR008999	Actin-crosslinking	SUPERFAMILY	50405	Actin-crosslinking proteins	coord: 239..364

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1229_length_12344_cov_4.015506	contig	NODE_1229_length_12344_cov_4.015506:3868..5562 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud851.t1	Gcaud851.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1229_length_12344_cov_4.015506 3868..5562 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud851.t1 ID=Gcaud851.t1|Name=Gcaud851.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=565bp
MGVSTSRRAWGGRWSAVYSMWTYIHRLLHLLGIAAVDVEEVALLSAPLVR
IRCVRRHRAPVVLAHDPCPMFPDEPLGWVSPSHLHISSTLFFLHFDTSHP
QRVDRARIATAAPSDTSPRAWLAVDHKTGIITLTASEMAAAVFHIHLSNA
KAAVPQVFLQCTCTAGRYLSVHLPTMRARVCASAVAACETFLINHVPLPP
TLAQHRDEPPPQDFTMAAAYQATRSCPLRVQSKAFDWFLASKPGTPVASS
RGKESGWEGFILEYDSPTRSAHIRDSRGLYLGFTEQLDQLIAAPDPSAEG
TENALNAVHSHHRAERFDVEIVADDELITLRSRKGYLSARRDGRIVLSQH
TIPGRREQFYLRLALPSMMDQSTPRLRLRACDGGARQVEASILVPAPAQI
GFDVLRDYDGFHEFIHDASESRILERKSDTELTVLMVQCHTFLVLTIPMT
LVLNVVEDPERKSVVMDLKSGLGVREYKGVWQASERPDGRCLLRCTLLAA
TSVPAPGFLLDGLMSHAMFETMKQLRVECIRRSTKDHQSSPTNSSQRRVA
GRLRARQTSTSLKS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023393	START-like_dom_sf
IPR008999	Actin-crosslinking