Gcaud8503.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8503.t1
Unique NameGcaud8503.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length298
Homology
BLAST of Gcaud8503.t1 vs. uniprot
Match: A0A2V3IL69_9FLOR (Beta-porphyranase A n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL69_9FLOR)

HSP 1 Score: 200 bits (509), Expect = 7.350e-59
Identity = 111/290 (38.28%), Postives = 154/290 (53.10%), Query Frame = 0
Query:   14 NGHNDPPPRYILNRESAGWKWVKQYNFSSEFNTERAGEVVPMNQLDRWTTDNHWQGRFPAVFDMNNVTYDGRSMVLRVRQHNAPTSGFLR---TFGESHRRAIDERMTMGRRFYTGSFVRSRGNITYGYFESVVKMGHSGLSSAFWLKERGGREREIDVFEYSTSPNLDGDRRRPLANQYLMNVHTFQRRGNQRIDHENSSFVVFDADLSRQEYVKAGLLWTRNKVVWYLNDTLVRELDHAGEFRDAKMRVQFDREYFNWIGDPRRN----DRFGDFEVMYIRTWQLQRS 296
            N  N  PP+ + ++ ++G+++ +  + S E N     + V  NQL  WTT+N W GRFPA+F   N       +V  V   ++     +R   +  E  ++ I++    G+  Y  +F RS   + YGY E   K+G S LSSAFWLKE  G EREIDVFE+STS   D     P +N Y MN+H F   G    D      +    +LS+QE +K G LWT   + WY+ND  +R++ H GEF D  M +Q DREY +W G P       D FGDF V Y+RTW +  S
Sbjct:   48 NAENYLPPQIVRDQLASGYEFERNDSLSIELNVSND-QTVDSNQLRNWTTENAWTGRFPAIFFAKNSIVSNNCLVQVVNIADSSDRETIRQECSDDEDAQKWIED----GKDVYDTTFFRSEQQMMYGYVEIACKLGDSSLSSAFWLKEHRGLEREIDVFEFSTSKK-DSGYSAPFSNMYNMNIHKFTTDG----DFSAQRSINMCTNLSQQELIKIGFLWTTTHLHWYINDVEIRKVQHNGEFCDLGMNIQLDREYLSWFGLPNDEQGGTDTFGDFVVHYVRTWNIVAS 327          
BLAST of Gcaud8503.t1 vs. uniprot
Match: UPI001F2067C4 (family 16 glycosylhydrolase n=1 Tax=Muricauda sp. SCSIO 65647 TaxID=2908843 RepID=UPI001F2067C4)

HSP 1 Score: 102 bits (253), Expect = 8.900e-22
Identity = 77/268 (28.73%), Postives = 115/268 (42.91%), Query Frame = 0
Query:   28 ESAGWKWVKQYNFSSEFNTERAGEVVPMNQLDRW-TTDNHWQGRFPAVFDMNNVTYDGRSMVLRVRQHNAPTSGFLRTFGESHRRAIDERMTMGRRFYTGSFVRSRGNITYGYFESVVKMGHSGLSSAFWLKERGG-REREIDVFEYSTSPNLDGDRRRPLANQYLMNVHTFQRRGNQRI-DHENSSFVVFDADLSRQEYVKAGLLWTRNKVVWYLNDTLVRELDHAGEFRDAKMRVQFDREYF-NWIGDPRRNDRFGDFEVMYIRTW 291
            ++  WK+  +   S EFN  +   +       +W  T+  W GR P++F  +NV      +VL  ++ N P +                    G   +T + V+S+  + YGYFE   K  +S LSSAFWL      ++ EID+FE     + D        + Y    H   +    +I DH         AD +    + AGL WTR ++VWYLN   +R+     +F  +   + FD E F  W G P   D  G FE+ Y R W
Sbjct:   37 DTKNWKY--EPTISDEFNGSQFDTI-------KWYDTNPTWIGRAPSLFRPSNVALKDGWLVLTGKRENVPNA------------------PEGYHTFTSAAVQSKRKVLYGYFEIKCKPMNSALSSAFWLYTPDSVKQEEIDIFEICGRNDTDSS----YEHTYFATTHYIVKPEKLKISDHVAHKTTYKLADTT----IVAGLKWTREEIVWYLNGKEIRK--RKNDFWHSPETINFDSEAFPTWWGLPSDEDNGGTFEIDYFRYW 267          
BLAST of Gcaud8503.t1 vs. uniprot
Match: S0F5M3_9BACT (Glycosyl hydrolase family 16 n=4 Tax=Bacteroidaceae TaxID=815 RepID=S0F5M3_9BACT)

HSP 1 Score: 97.8 bits (242), Expect = 3.770e-20
Identity = 74/283 (26.15%), Postives = 118/283 (41.70%), Query Frame = 0
Query:   13 INGHNDPPPRYILNRESAGWKWVKQYNFSSEFNTERAGEVVPMNQLDRWTTDNH-WQGRFPAVFDMNNVTYDGRSMVLRVRQHNAPTSGFLRTFGESHRRAIDERMTMGRRFYTGSFVRSRGNITYGYFESVVKMGHSGLSSAFWLKERGG-REREIDVFEYSTSPNLDGDRRRPLANQYLMNVHTFQRRGNQRI-DHENSSFVVFDADLSRQEYVKAGLLWTRNKVVWYLNDTLVRELDHAGEFRDAKMRVQFDREYF-NWIGDPRRNDRFGDFEVMYIRTW 291
            +N      P+  +   S  W           +NT+ + E        +W   N  W GR P++F   NV  +   ++L  ++ N   +                    G   +T + V+S+  + YG+FE   K  +S LSSAFWL  +   ++ EID+FE         D        Y    H   ++ N +I DH         AD    +++ AGL WTR+++VWY+N   +R      +F  +   + FD E F +W G P   D  G+F++ Y R W
Sbjct:   25 VNQQESTWPQPCMEGNSGNWV----------YNTQISDEFEAPFDTAKWYDHNPTWLGRQPSLFRKENVRVENGQLILTGKRENVADA------------------PEGYHTFTTAAVQSKKKVLYGFFEIKCKPMNSALSSAFWLYTQDSIKQEEIDIFEICGR----NDAAPSYEKIYFATSHYILKKQNLQISDHVEHLTEGRWAD----QWITAGLKWTRDELVWYVNGKEIRH--RKNDFWHSPETINFDSEAFPSWWGLPSDQDNGGEFQIEYFRYW 269          
BLAST of Gcaud8503.t1 vs. uniprot
Match: A0A382HJC0_9ZZZZ (GH16 domain-containing protein n=3 Tax=root TaxID=1 RepID=A0A382HJC0_9ZZZZ)

HSP 1 Score: 79.3 bits (194), Expect = 2.820e-13
Identity = 77/294 (26.19%), Postives = 123/294 (41.84%), Query Frame = 0
Query:   29 SAGWKWVKQYNFSSEFNTER--------AGEV-----VPMNQLDRWTTDNHWQGRFPAVFDMNNVTYDGRSMVLRVRQHNAPTSGFLRTFGESHRRAIDERMTMGRRFYTGSFVRSRGNITYGYFESVVKMGHSGLSSAFWLKERGGREREIDVFEY--STSPNLDGDRRRPLANQYLM--NVHTFQRRGNQRIDHENS---------SFVVFDADLSRQEYVKAGLLWTRNKVVWYLNDTLVRELD--HAGEFRDAK-MRVQFDREYFNWIGDPRRNDRFGDFEVMYIRTWQL 293
            S G  W+ + + S EFN           AG+V      P        +   W GR P  FD  +   +   + L ++ +  P S       E+    IDE        YT S + S+ N  YGYFE   +  +  +SSAFWL    G   E+D+FE    T   +DG    P A  Y M   +H +     +   +  S          F ++ A++S  EY+            +Y + + V  ++   +G+  +   M +  D E F+W G P++N+   +F++ YIR+WQL
Sbjct:   49 SIGNSWLFRSDLSDEFNENEINIDKWFIAGDVNNEVIYPEESGLEDGSAADWVGRAPGAFDKKSPFIENGILNLPIKWN--PNSDLFPYLDENREELIDEDCMCKYGKYTTSGLISKSNAQYGYFEIKARAANIPISSAFWLI---GNHFEVDIFELIGKTGNGIDGSG--PEA-PYTMPATIHNWDEGDLEDNGYGKSFSLNWNVSEDFHIYGAEIS-SEYIN-----------FYADGSKVGSINKKESGKIWNTDFMHIWVDTEIFSWEGFPKKNELPANFQIDYIRSWQL 322          
The following BLAST results are available for this feature:
BLAST of Gcaud8503.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IL69_9FLOR7.350e-5938.28Beta-porphyranase A n=2 Tax=Gracilariopsis chorda ... [more]
UPI001F2067C48.900e-2228.73family 16 glycosylhydrolase n=1 Tax=Muricauda sp. ... [more]
S0F5M3_9BACT3.770e-2026.15Glycosyl hydrolase family 16 n=4 Tax=Bacteroidacea... [more]
A0A382HJC0_9ZZZZ2.820e-1326.19GH16 domain-containing protein n=3 Tax=root TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 76..261
e-value: 4.6E-13
score: 49.0
IPR000757Glycoside hydrolase family 16PROSITEPS51762GH16_2coord: 13..296
score: 14.017018
NoneNo IPR availableGENE3D2.60.120.200coord: 23..293
e-value: 5.7E-37
score: 129.8
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 36..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1885_length_7873_cov_4.390902contigNODE_1885_length_7873_cov_4.390902:4886..5874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8503.t1Gcaud8503.t1Gracilaria caudata M_176_S67 malemRNANODE_1885_length_7873_cov_4.390902 4886..5874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8503.t1 ID=Gcaud8503.t1|Name=Gcaud8503.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=298bp
MALPEVRFKPNLINGHNDPPPRYILNRESAGWKWVKQYNFSSEFNTERAG
EVVPMNQLDRWTTDNHWQGRFPAVFDMNNVTYDGRSMVLRVRQHNAPTSG
FLRTFGESHRRAIDERMTMGRRFYTGSFVRSRGNITYGYFESVVKMGHSG
LSSAFWLKERGGREREIDVFEYSTSPNLDGDRRRPLANQYLMNVHTFQRR
GNQRIDHENSSFVVFDADLSRQEYVKAGLLWTRNKVVWYLNDTLVRELDH
AGEFRDAKMRVQFDREYFNWIGDPRRNDRFGDFEVMYIRTWQLQRSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR013320ConA-like_dom_sf