Gcaud8478.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8478.t1
Unique NameGcaud8478.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length585
Homology
BLAST of Gcaud8478.t1 vs. uniprot
Match: A0A2V3J6L6_9FLOR (GTPase Der n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6L6_9FLOR)

HSP 1 Score: 800 bits (2065), Expect = 2.620e-286
Identity = 423/564 (75.00%), Postives = 475/564 (84.22%), Query Frame = 0
Query:   29 AGARSAPAPTVYAHTRLTAALVGRPNVGKSTLFNRLAAAVRGRQTDADGSPPLAFVRSVVHPLPGVTRDSREAAGAVADLLLKVVDTPGLESAVGLQEPVRAADDVPFAEGTSLVDAVAHCEHVAYRRVYAHMKAATISAVHHSNLILFIIDASVGVTALDHAHAKWLRSVLTPQKSLILVANKCDVADSDKRAIDAYELGFGDPVLISAEQALGFADLYERIRHVP-ALPAIEHKPPQPAEDSPSDVSDA-------EIQIRQSFDDELVISTSARLREQPLRQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNAQYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVVMDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESDMADWRARLRYEVDNKLEQLKGVEVVEMSAKYWEDDPTQGKRLYDAVQRARGRWERRVPTSALNRFVKNFNERMSVGGGTRGERRNRIGVTKFITQKKIRPPMFRLDGSSAVSMNYLRSLSNAIRHEFGFEGVPIRVKRPSRRKKR 584
            A ARSAPAP+VY+ T LTAALVGRPNVGKSTLFNRLAAAVRGRQTD+  +PPL FVRSVVHPLPGVTRDSR AA A++DLLL VVDTPGLE AV           +   E  SLV+AVAHC  +AYRRVYA M+ ATI AV H+NL+LFI+DAS  +TALDHAHAKWLRS LTP+KSLILVANKCDVA S+ RAIDAY LGFGDPVLISAEQ LGFADLYERIR +P +LP      PQPAE + + V          E  IR+SFD++LVI+TSARLREQPL QLI SIVGRPNVGKSTLLNRLVGE+RSIV AAAG+TRDAVLC W+    R ++PPVWLVDTPGVRAE KVS+D LERL VRASLQALR+SHVVVVV+DATESLTRQD+KLMDV++TEGRA VLV+NKMD +   D+  WRA LRY VD+KLEQLKG+EVVEMSAK W  DP+Q +RLY AVQRARGRWE+R+PTSALNRFVK FNERM+VGGGT+GERRNRIG+TKFITQKKIRPPMFRLDGSSAVSMNYLR+L+NAIRHEFG+EGVPIRVKRPSRR++R
Sbjct:   27 ASARSAPAPSVYSDTHLTAALVGRPNVGKSTLFNRLAAAVRGRQTDSRSTPPLTFVRSVVHPLPGVTRDSRHAAAAISDLLLTVVDTPGLEDAVHNASDQSHRPSLVEDEPASLVNAVAHCSDLAYRRVYASMRDATIRAVAHANLVLFIVDASTPLTALDHAHAKWLRSCLTPKKSLILVANKCDVAQSEHRAIDAYALGFGDPVLISAEQGLGFADLYERIRVLPRSLPV-----PQPAEATTTQVHSQSERLHPEEAAIRESFDEQLVITTSARLREQPLAQLITSIVGRPNVGKSTLLNRLVGEERSIVGAAAGITRDAVLCHWDTPLRRSDHPPVWLVDTPGVRAEAKVSADQLERLTVRASLQALRNSHVVVVVIDATESLTRQDVKLMDVVVTEGRAAVLVVNKMDKIGPPDLDQWRAELRYSVDHKLEQLKGIEVVEMSAKDWHQDPSQAQRLYAAVQRARGRWEKRIPTSALNRFVKGFNERMAVGGGTQGERRNRIGITKFITQKKIRPPMFRLDGSSAVSMNYLRALTNAIRHEFGYEGVPIRVKRPSRRRRR 585          
BLAST of Gcaud8478.t1 vs. uniprot
Match: R7QJ22_CHOCR (GTPase Der n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ22_CHOCR)

HSP 1 Score: 615 bits (1587), Expect = 1.460e-213
Identity = 345/587 (58.77%), Postives = 429/587 (73.08%), Query Frame = 0
Query:    9 VRALHADARAGATARVAVPAAGARSAPAPTVYAHTRLTAALVGRPNVGKSTLFNRLAAAVRGRQTDADGSP-PLAFVRSVVHPLPGVTRDSREAAGAVADLLLKVVDTPGLESAVGLQEPVRAADDVPFAEG-TSLVDAVAHCEHVAYRRVYAHMKAATISAVHHSNLILFIIDASVGVTALDHAHAKWLRSVLTPQKSLILVANKCDVADSDKRAIDAYELGFGDPVLISAEQALGFADLYERIRHVPALPAIEHKPPQPAEDSPSDVSDAE-------IQIRQSFDDELVISTSARLREQPLRQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNA--QYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVVMDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESDMADWRARLRYEVDNKLEQLKGVEVVEMSAKYWEDDPTQGKRLYDAVQRARGRWERRVPTSALNRFVKNFNERMSVGGGTRGERRNRIGVTKFITQKKIRPPMFRLDGSSAVSMNYLRSLSNAIRHEFGFEGVPIRVKRPSRRKKR 584
            +R  H+ +R    ARVA  A  +R+APAPTVY  T L  ALVGRPNVGKSTLFN+LA+AVRGR TD   +P PL FVRSVVH LPGVTRD REA+ A++DL   V DT GLE AV  +   R A+  P A+G  +LV A A  +   YR +Y  M+A T + V  ++++ F+ DA+ G+T +D A A WLR   + +K +++VANKCDVA ++  AI+AYELGFGDPV++SAE  LG ADLY  I  V      +         +P+ + DAE        ++R+SFDDELV+    ++ E+PLRQLIVSI+GRPNVGKSTLLNRLVGE++SI    AG+TRD+VLC W       RP+  PVWLVDT G+RA  KV ++NLER  VR+SL+ALR SHVV++V+D+T  L  QD+KL+DV ITEGRAVV+V+NKMD LH  +M  WR  LRY +D+K+  L+GVEVVE+SAK W D   Q +RL+ AVQ++R RWE+RVPTSALNRFV NFNER+SVGG   GE+RNRIGVTKFI+QKKIRPPMFRLDGSSAVSMNYLRSL+NAIR EFGFEGVPIRVKRPSRRK++
Sbjct:   24 LRQAHSSSR---RARVAPIARPSRNAPAPTVYVDTGLRIALVGRPNVGKSTLFNQLASAVRGRGTDGVSNPAPLVFVRSVVHALPGVTRDPREASAAISDLRFTVTDTAGLEDAVS-EALERKAE--PRADGEVTLVAATAMTDTPVYRNLYRKMEAGTAAEVRDADVVFFMFDAAHGLTQVDRAIALWLRKEAS-EKDIVVVANKCDVAGAENNAIEAYELGFGDPVVLSAEHKLGLADLYTEINRVYMNRGKQGNA------APAQLVDAEGTERTENDELRESFDDELVLGYGQKVGEEPLRQLIVSIIGRPNVGKSTLLNRLVGEEKSIAGPVAGITRDSVLCEWKLPENISRPDDVPVWLVDTAGIRARVKVETENLERSSVRSSLRALRHSHVVLIVLDSTNPLAHQDMKLIDVAITEGRAVVIVVNKMDKLHVDNMDSWRESLRYAIDSKVHALQGVEVVEISAKDWSDGDAQMRRLFWAVQKSRERWEKRVPTSALNRFVANFNERLSVGGRIDGEKRNRIGVTKFISQKKIRPPMFRLDGSSAVSMNYLRSLTNAIRKEFGFEGVPIRVKRPSRRKRK 597          
BLAST of Gcaud8478.t1 vs. uniprot
Match: UPI001E1D9841 (GTPase Der-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D9841)

HSP 1 Score: 288 bits (738), Expect = 4.190e-89
Identity = 146/283 (51.59%), Postives = 209/283 (73.85%), Query Frame = 0
Query:  300 EQPLRQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNAQYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVVMDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESD-MADWRARLRYEVDNKLEQLKGVEVVEMSAKYWEDDPTQGKRLYDAVQRARGRWERRVPTSALNRFVKNFNERMSVGGGTRGERRNRIGVTKFITQKKIRPPMFRLDGSSAVSMNYLRSLSNAIRHEFGFEGVPIRVKRPSRR 581
            ++P++++IV+I+GRPNVGKSTL+NRL+   ++I+  A+GVTRDAVL  W  + E  E  P+W+VDT GVR   +  S+ +E   +++S++ALR SHV V+V+DATE  T QD++L+ V ITEGRA+V+V+NKMD +  +  +A+ R   + +V   L ++ GVE++E+SAK W    +Q  RLY+A+Q AR RWERR+PTS L RFV  FN   ++G  ++G+ R   GVTKF++QKK RPP+FRLDGS+ +S NY++SL+NAIR EFGF+GVPIR+KRP  R
Sbjct:   78 DEPIKRVIVAILGRPNVGKSTLMNRLLDRGQAIIGPASGVTRDAVLAEWRPKMESAE--PLWIVDTAGVRTRPQTGSNRVELESIKSSMRALRISHVAVIVIDATEPFTAQDVRLVQVAITEGRAIVIVINKMDCIRSAQSVANLRDVTKRQVRTALNEISGVEILELSAKEWNGGESQTARLYNAIQSARQRWERRIPTSVLTRFVLRFNAARAIGRSSKGQNR---GVTKFMSQKKTRPPVFRLDGSAVLSDNYIKSLTNAIREEFGFQGVPIRIKRPMTR 355          
BLAST of Gcaud8478.t1 vs. uniprot
Match: A0A239BU98_9PROT (GTPase Der n=3 Tax=Azospirillaceae TaxID=2829815 RepID=A0A239BU98_9PROT)

HSP 1 Score: 266 bits (681), Expect = 3.690e-79
Identity = 211/547 (38.57%), Postives = 285/547 (52.10%), Query Frame = 0
Query:   39 VYAHTRLTAALVGRPNVGKSTLFNRLAAAVRGRQTDADGSPPLAFVRSVVHPLPGVTRDSREAAGAVADLLLKVVDTPGLESAVGLQEPVRAADDVPFAEGTSLVDAVAHCEHVAYRRVYAHMKAATISAVHHSNLILFIIDASVGVTALDHAHAKWLRS-VLTPQKSLILVANKCDVADSDKRAIDAYELGFGDPVLISAEQALGFADLYERIRHVPALPAIEHKPPQPAEDSPSDVSDAEIQIRQSFDDELVISTSARLREQPL-RQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNAQYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVVMDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESDMADWRARLRYEVDNKLEQLKGVEVVEMSAKYWEDDPTQGKRL---YDAVQRARGRWERRVPTSALNRFVKNFNERMS---VGGGTRGERRNRIGVTKFITQKKIRPPMFRLDGSSAVSM--NYLRSLSNAIRHEFGFEGVPIRV 575
            + A  RLT A+VGRPNVGKSTLFNRL     G++             ++V   PGVTRD R A G V  L   VVDT GLE                  +G+                + A M+  T  A+  +++ LF+IDA  GVTA+D   A WLR+ V TP    ILVANKC+ A S    I+AYELG G+PV +SAE   G ADL + +  +P +P  E  P    ED   +    E    +  DD         + ++P  + L ++IVGRPNVGKSTLLN LV E+R +    AG+TRDA+   WN +        V LVDT G+R   +V  D LER   + +L+ +R +HVVV+V+DA   L +QDL +  +++ EGRA+V+ LNK DA+ + + A    RL   +   L Q+KG+  V +SA        +G+RL    D V    G W RR+PTS LNR++    E      V G     RR +I   +++TQ K RPP F L  S  V +  NY R L N +R  F   G+PIR+
Sbjct:    2 IKATHRLTVAIVGRPNVGKSTLFNRLV----GKKI------------ALVDDTPGVTRDWRAADGRVGGLEFTVVDTAGLEDVF---------------DGS----------------LEARMRVQTERAIERADVCLFLIDARAGVTAMDKHFAAWLRARVKTPT---ILVANKCEGAASQPGLIEAYELGLGEPVPLSAEHGEGMADLVDAL--LPHMPKEEPAPEAEVEDDLPEDDLVEAIAAEKTDD---------VPDEPEPKALQMAIVGRPNVGKSTLLNALVQEERVLTGPEAGMTRDAIAVEWNWKGRA-----VRLVDTAGLRKRARVD-DKLERAANQDTLRVIRMAHVVVLVLDADGILDKQDLTIARLVVEEGRALVIALNKWDAVVDKNAA--LRRLTDRLQTSLPQVKGIPTVTISA-------LKGQRLAELLDCVVTTYGVWNRRIPTSQLNRWLAGMTESHPPPLVDG-----RRLKI---RYMTQVKSRPPTFALFVSKPVDLPENYSRYLVNGLRESFDLPGIPIRM 464          
BLAST of Gcaud8478.t1 vs. uniprot
Match: UPI001CCAB470 (ribosome biogenesis GTPase Der n=1 Tax=Afifella sp. IM 167 TaxID=2033586 RepID=UPI001CCAB470)

HSP 1 Score: 265 bits (676), Expect = 2.370e-78
Identity = 197/538 (36.62%), Postives = 285/538 (52.97%), Query Frame = 0
Query:   45 LTAALVGRPNVGKSTLFNRLAAAVRGRQTDADGSPPLAFVRSVVHPLPGVTRDSREAAGAVADLLLKVVDTPGLESAVGLQEPVRAADDVPFAEGTSLVDAVAHCEHVAYRRVYAHMKAATISAVHHSNLILFIIDASVGVTALDHAHAKWLRSVLTPQKSLILVANKCDVADSDKRAIDAYELGFGDPVLISAEQALGFADLYERIRHV--PALPAIEHKPPQPAEDSPSDVSDAEIQIRQSFDDELVISTSARLREQPLRQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNAQYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVVMDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESDMADWRARLRYEVDNKLEQLKGVEVVEMSAKYWEDDPTQGKRLYDAVQRARGRWERRVPTSALNRFVKNF---NERMSVGGGTRGERRNRIGVTKFITQKKIRPPMFRLDGS--SAVSMNYLRSLSNAIRHEFGFEGVPIRV 575
            LT AL+GRPNVGKSTLFNRLA    G++             ++V   PGVTRD REA   + DL + ++DT GLE          A DD                       +   M+A T  A+  +++ LF++DA VGVT  D   A+ +R+   P   ++LVANK +   +D   ++AY LGFG+ V ISAE  LG  DLYE I     P   A+E +P +   D   + S+                      E P + + V+IVG+PN GKSTL+NRL+GE+R +    AG+TRDA+   W  +       P  LVDT G+R   KV  D LE+L V  +L+A+R S VV++V+DAT    +QDL++ D++  EGRA+VL LNK D + ++D    R  L  +++N L Q++GV ++ +SA       +   RL  A+ +    W +RVPT++LNR++ +    +   +V G        R+ V K++TQ K RPP F L  S   A+  +Y R + N +R +FG  GVPIR+
Sbjct:    3 LTLALIGRPNVGKSTLFNRLA----GQKI------------ALVDDRPGVTRDRREAPAKLGDLEVTLIDTAGLED---------ATDD----------------------SLQGRMRAQTERALAEADISLFMMDARVGVTPDDEHFARLIRAGGRP---VVLVANKAEGRAADAGLLEAYSLGFGEAVPISAEHGLGIPDLYEAIAEALGPERMALEARPEEEELDEDGEPSED---------------------EGPAKPIRVTIVGQPNAGKSTLVNRLIGEERMLTGPEAGITRDAIAVDWEWKGR-----PFRLVDTAGLRRRAKVI-DKLEKLSVGDALRAIRFSEVVIIVIDATMPFEKQDLQIADLVAKEGRALVLALNKWDQVTDADAV--RRELEADLNNTLAQVRGVPLIPISAL----TGSGLDRLMGALSKVYDIWNKRVPTASLNRWLDHLVAHHPPPAVSG-------RRLKV-KYLTQSKTRPPTFFLSCSRPEALPESYKRYVVNGLREDFGLAGVPIRL 449          
BLAST of Gcaud8478.t1 vs. uniprot
Match: UPI0004137C18 (ribosome biogenesis GTPase Der n=1 Tax=Rubritepida flocculans TaxID=182403 RepID=UPI0004137C18)

HSP 1 Score: 263 bits (672), Expect = 5.180e-78
Identity = 207/551 (37.57%), Postives = 282/551 (51.18%), Query Frame = 0
Query:   30 GARSAPAPTVYAHTRLTAALVGRPNVGKSTLFNRLAAAVRGRQTDADGSPPLAFVRSVVHPLPGVTRDSREAAGAVADLLLKVVDTPGLESAVGLQEPVRAADDVPFAEGTSLVDAVAHCEHVAYRRVYAHMKAATISAVHHSNLILFIIDASVGVTALDHAHAKWLRSVLTPQKSLILVANKCDVADSDKRAIDAYELGFGDPVLISAEQALGFADLYERIRHVPALPAIEHKPPQPAEDSPSDVSDAEIQIRQSFDDELVISTSARLREQPLRQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNAQYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVVMDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESDMADWRARLRYEVDNKLEQLKGVEVVEMSAKYWEDDPTQGKRLYDAVQRARGRWERRVPTSALNRFVKNFNERMS---VGGGTRGERRNRIGVTKFITQKKIRPPMFRLDGSSA--VSMNYLRSLSNAIRHEFGFEGVPIRV 575
            G R APA +         A++GRPNVGKS+LFNRL     GR+             ++V  +PGVTRD +EA   +A   + +VDT GLE          AA D                       ++  M+A++  A+  +++ LF++DA  G+TA D A A WLR    P   +ILVANK +       A++AYELG GDP+ +SAE   G A L E I         EH P  P E    D   A                     E+PLR   ++I+GRPN GKSTLLN L+GE+R I     G+TRDA+     A + R    PV +VDT G+R   +++ D LE + V AS+ ALR + VVV+V+DAT  L  QDL++  +   EGRA+V+ LNK DA+   D A  RAR+   +++ L QLKGVEVV MSA          ++L  AV+RA  RW RR+ T ALNR+ +    R +   V G     RR ++   +++T  K RPP   + G+ A  +   Y R L N  R EF   GVPIR+
Sbjct:    2 GERDAPAASGLP----VVAILGRPNVGKSSLFNRLV----GRRI------------AIVDDVPGVTRDRKEAPARIAGREVLLVDTAGLE---------EAAPDT----------------------LFGRMRASSEVALERADVALFVVDARSGLTAADRAFANWLRRARRP---VILVANKAEGRAGAANAMEAYELGLGDPIAVSAEHGEGVATLMEAIA--------EHLPAPPDEAKEEDAEGA---------------------EKPLR---IAILGRPNAGKSTLLNTLIGEERMITGPEPGLTRDAI-----ASHFRDAEGPVRVVDTAGMRKRARIA-DRLEEMSVAASIAALREAEVVVLVLDATLGLEEQDLRIARLAEREGRALVIALNKWDAVE--DRAAARARVGDALESSLAQLKGVEVVTMSAA----TGAGVEKLMPAVRRAHERWNRRIGTGALNRWFEQALARHAPPLVDG-----RRLKL---RYVTMPKARPPTLVIFGTRAELLPFEYRRYLLNGFRAEFDMPGVPIRL 446          
BLAST of Gcaud8478.t1 vs. uniprot
Match: A0A7W6RFP1_9PROT (GTPase Der n=1 Tax=Roseospira visakhapatnamensis TaxID=390880 RepID=A0A7W6RFP1_9PROT)

HSP 1 Score: 263 bits (673), Expect = 1.060e-77
Identity = 207/556 (37.23%), Postives = 282/556 (50.72%), Query Frame = 0
Query:   43 TRLTAALVGRPNVGKSTLFNRLAAAVRGRQTDADGSPPLAFVRSVVHPLPGVTRDSREAAGAVADLLLKVVDTPGLESAVGLQEPVRAADDVPFAEGTSLVDAVAHCEHVAYRRVYAHMKAATISAVHHSNLILFIIDASVGVTALDHAHAKWLRSVLTPQKSLILVANKCDVADSDKRAIDAYELGFGDPVLISAEQALGFADLYERIR-HVPALPAIEHKPPQPAEDSPSDVSDAEIQIRQSFDDELVISTSARLREQ-----------------PLRQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNAQYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVVMDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESDMADWRARLRYEVDNKLEQLKGVEVVEMSAKYWEDDPTQGK---RLYDAVQRARGRWERRVPTSALNRFVKNFNERMSVGGGTRGERRNRIGVTKFITQKKIRPPMFRLDGSSAVSM--NYLRSLSNAIRHEFGFEGVPIRV 575
            T LT A++GRPNVGKSTLFNRLA    GR+             ++VH  PGVTRD R A G + D+ L++VDT GLE A     P  A +                            M+  T  A+  +++ L +IDA  GVT LD   A+ LR   TP   +I+VANKC+        +DAY LG GDPV +SAE   G A LYE +  H  AL A     P  A     D   AE+      D    +   A    +                 P R L ++IVGRPN GKSTL+NRL+ E R +    AGVTRDA+   W+ +       P+ LVDT G+R + +V  ++LE+L V  +L A+R + VVV+VMDA   + +QDL +  +++ EGRA+VL +NK DA    + A    R+R  ++  L Q +G+  V +SA        +G+   RL DA   A   W RRV T  LNR++    E      G  G RR R+   +++TQ K RPP F +  S A  +  +Y+R L N +R  FGFEGVP+R+
Sbjct:    2 TTLTVAIIGRPNVGKSTLFNRLA----GRRL------------AIVHDQPGVTRDRRFADGRLGDMALRIVDTAGLEEA-----PADALE--------------------------GRMRQQTERALAEADVALMLIDARAGVTPLDEHFAQILRVSPTP---VIVVANKCEGRAGQGGLMDAYGLGLGDPVPLSAEHGDGLALLYEALLPHEQALAARADAAPGGAGAEAPDPETAEMHDEAGDDGVSPLEARALANAEDDDADPDAPPAEADDTAPPRPLNLAIVGRPNTGKSTLVNRLLDEDRLLTGPEAGVTRDAIAIDWSHRGR-----PIRLVDTAGLRRKGRVV-ESLEKLSVADTLNAIRMAEVVVLVMDANMVMDKQDLSIARMVVEEGRALVLAVNKWDAAE--NRAAVLKRMRDRLETSLTQARGIRFVTLSA-------LRGRNLDRLMDAALEAHEVWNRRVATGRLNRWLTGMTEAHPPPMGQHG-RRVRL---RYMTQAKARPPTFAVFCSRAEDLPDSYVRYLVNGLRETFGFEGVPVRL 488          
BLAST of Gcaud8478.t1 vs. uniprot
Match: A0A560HCY9_9PROT (GTPase Der n=8 Tax=Nitrospirillum TaxID=1543705 RepID=A0A560HCY9_9PROT)

HSP 1 Score: 262 bits (670), Expect = 1.080e-77
Identity = 201/536 (37.50%), Postives = 278/536 (51.87%), Query Frame = 0
Query:   44 RLTAALVGRPNVGKSTLFNRLAAAVRGRQTDADGSPPLAFVRSVVHPLPGVTRDSREAAGAVADLLLKVVDTPGLESAVGLQEPVRAADDVPFAEGTSLVDAVAHCEHVAYRRVYAHMKAATISAVHHSNLILFIIDASVGVTALDHAHAKWLRSVLTPQKSLILVANKCDVADSDKRAIDAYELGFGDPVLISAEQALGFADLYERIRHVPALPAIEHKPPQPAEDSPSDVSDAEIQIRQSFDDELVISTSARLREQPLRQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNAQYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVVMDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESDMADWRARLRYEVDNKLEQLKGVEVVEMSAKYWEDDPTQGKRLYDAVQRARGRWERRVPTSALNRFVKNFNERMS---VGGGTRGERRNRIGVTKFITQKKIRPPMFRLDGSSAVSM--NYLRSLSNAIRHEFGFEGVPIR 574
            RLT A++GRPNVGKSTLFNRLA    G++             ++V   PGVTRD R A G +A + L VVDT GLE          A DD                       + A M+  T  A+  +++ LFI+DA  G+T LD   A WLR   TP   +ILVANKC+        ++ YELG GDPV +SAE   G ADL E +   P LP             P +  D E +  +  DDE   +  AR   +PL+   ++IVGRPNVGKSTLLN L+GE+R +    AG+TRDA+   W+ +       PV LVDT G+R   +V  D LE+L V  +L+ +R +HVVV+V+DA   L +QDL +   +I EGR +V+ +NK DA+  ++ A+   +L   ++  L Q +G+  + +SA   +        L DA       W RR+PT+ LNR+++   E      V G     RR +I   +++TQ K RPP F L  S  V +  +Y R L N +R  F    VP+R
Sbjct:    6 RLTVAIIGRPNVGKSTLFNRLA----GKKL------------AIVDDTPGVTRDWRSADGHLAGIELTVVDTAGLE---------EAFDD----------------------SLEARMRRQTERAIERADVGLFIVDARAGITPLDRHFAAWLRKGKTP---IILVANKCEGNAGKPGLMECYELGLGDPVPLSAEHGEGMADLVEAL--TPYLP-------------PDEPEDEEAEAEEPLDDE---AAEARDNAKPLQ---LAIVGRPNVGKSTLLNSLLGEERVLTGPEAGMTRDAIAAEWSWRDR-----PVKLVDTAGLRRRARVE-DKLEKLAVADTLRVVRMAHVVVLVLDADAILDKQDLTIARQVIEEGRGLVIAVNKWDAV--ANRAEALQQLSDRLETSLPQARGIPTITISALKQQKLDV----LLDAAFEVYRLWNRRIPTAQLNRWLQGMLESHPPPLVDG-----RRLKI---RYMTQVKARPPTFALFSSRPVEIPEHYTRYLINGLRETFKLPAVPLR 450          
BLAST of Gcaud8478.t1 vs. uniprot
Match: A0A7Y8MC09_9PROT (GTPase Der n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8MC09_9PROT)

HSP 1 Score: 262 bits (669), Expect = 1.560e-77
Identity = 198/532 (37.22%), Postives = 278/532 (52.26%), Query Frame = 0
Query:   45 LTAALVGRPNVGKSTLFNRLAAAVRGRQTDADGSPPLAFVRSVVHPLPGVTRDSREAAGAVADLLLKVVDTPGLESAVGLQEPVRAADDVPFAEGTSLVDAVAHCEHVAYRRVYAHMKAATISAVHHSNLILFIIDASVGVTALDHAHAKWLRSVLTPQKSLILVANKCDVADSDKRAIDAYELGFGDPVLISAEQALGFADLYERIRHVPALPAIEHKPPQPAEDSPSDVSDAEIQIRQSFDDELVISTSARLREQPLRQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNAQYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVVMDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESDMADWRARLRYEVDNKLEQLKGVEVVEMSAKYWEDDPTQGKRLYDAVQRARGRWERRVPTSALNRFVKNFNERMSVGGGTRGERRNRIGVTKFITQKKIRPPMFRLDGS--SAVSMNYLRSLSNAIRHEFGFEGVPIR 574
            LT A+VGRPNVGKSTLFNRLA    G++             ++VH  PGVTRD REA G V  L +++VDT GLE                 AE  SL                  M+A T SAV  ++++LF+IDA  GVT  D   A+ LR    P   L+LV NKC+  +++    +A+ LG G PV +SAE  LG  +L + +  +            PA D P D ++   +      +E            P R L ++IVGRPNVGKSTL+NRL+GE+R +    AG+TRD++   W+ Q        + L DT G+R   ++S + LE++ V  +L+ +R + VVVVV+DAT +L +QD ++ +++  EGR +VL LNK D + + D    R  L   +D  L Q+KGV +V +SA      P    RL +AV RA   W RRV T  LNR++ +     +V        + R    ++ITQ K RPP F L  S   A+  +Y+R LSNA+R  F F G P+R
Sbjct:    3 LTLAIVGRPNVGKSTLFNRLA----GKRL------------ALVHDTPGVTRDRREAEGRVGSLRVRLVDTAGLEE----------------AEAGSLA---------------GRMRAMTESAVAEADIVLFVIDARAGVTPYDQHFAEILRRSGRP---LVLVTNKCEGREAEAGVAEAFALGLGTPVELSAEHGLGLDELAQAVADLAETLT-------PATDDP-DAAEPGAEGAGEDGEE----------GAPDRPLRLAIVGRPNVGKSTLINRLLGEERLLTGPEAGITRDSISVDWSWQGRA-----IKLYDTAGMRRRARIS-ETLEKMSVGDTLRVIRFAEVVVVVLDATMALEKQDAQIAELVANEGRGIVLALNKWDLVEDRD--GLRRALTERLDILLPQIKGVPLVPVSATTGTGLP----RLMEAVTRAYEGWTRRVSTGQLNRWLAD-----TVAAHQPPAAQGRPVRLRYITQAKARPPTFALFVSRPEAIPQSYMRYLSNALRESFDFPGTPLR 449          
BLAST of Gcaud8478.t1 vs. uniprot
Match: UPI00068541CD (ribosome biogenesis GTPase Der n=1 Tax=Geminicoccus roseus TaxID=404900 RepID=UPI00068541CD)

HSP 1 Score: 262 bits (670), Expect = 1.910e-77
Identity = 191/537 (35.57%), Postives = 289/537 (53.82%), Query Frame = 0
Query:   46 TAALVGRPNVGKSTLFNRLAAAVRGRQTDADGSPPLAFVRSVVHPLPGVTRDSREAAGAVADLLLKVVDTPGLESAVGLQEPVRAADDVPFAEGTSLVDAVAHCEHVAYRRVYAHMKAATISAVHHSNLILFIIDASVGVTALDHAHAKWLRSVLTPQKSLILVANKCDVADSDKRAIDAYELGFGDPVLISAEQALGFADLYERIRHVPALPAIEHKPPQPAEDSPSDVSDAEIQIRQSFDDELVISTSARLREQPLRQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNAQYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVVMDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESDMADWRARLRYEVDNKLEQLKGVEVVEMSAKYWEDDPTQGKRLYDAVQRARGRWERRVPTSALNRFVK---NFNERMSVGGGTRGERRNRIGVTKFITQKKIRPPMF----RLDGSSAVSMNYLRSLSNAIRHEFGFEGVPIRV 575
            T A++GRPNVGKSTLFNRL     GR+            +++VH LPGVTRD  E  G +  L  +V+DT GL+  VG ++ +                                ++A T++ +  ++L LF+ DA  G+T LDH  AK L      +K ++L+ANKC+   ++  A +A+ LG G+PV ISAE   G ADL++ I        ++H P    E +    S+ ++ +  S  DE   ++   L      +L+  IVGRPN GKS+L+NRL+G+ R +     G+TRD+V   W  Q    E     L+DT G+R + ++  + LER+ V A++QAL+ +H  V+V+DAT+ L  QDL + D++I EGRA+V+ +NK D +   D A+    +R  +++KL Q+ G+E+V +SA+      +   RL  AV +   RW RR  T+ LNR+++     ++   VGG     RR +I   +FITQ   RPP F     LD +  V  +YLR LSN++R      GVPIR+
Sbjct:   14 TIAILGRPNVGKSTLFNRLV----GRR------------QAIVHDLPGVTRDRLEGEGKLGHLHFRVIDTAGLD--VGAEDTLEG-----------------------------RLRAQTLAGLEQADLGLFLFDARAGLTPLDHDVAKLLHRT---RKPIVLLANKCEGRQAEIEAAEAWSLGLGEPVPISAEHGEGIADLFQVI--------LKHLPTAEEEAAEESESEDQLPLPSSLADEPAAASGPELGSDKAIKLV--IVGRPNAGKSSLINRLIGDDRLLTGPEPGLTRDSVALAWTHQGRSFE-----LIDTAGMRRKARIE-ERLERMSVSATVQALKFAHAAVLVVDATQPLEVQDLTIADLVIREGRALVVAINKWDLI--DDPAEALKNIRARLEDKLAQVPGIEMVTLSAR----TGSGLNRLLPAVVKTVQRWNRRTTTAKLNRWLQMALQDHQPPQVGG-----RRLKI---RFITQAASRPPTFILFQNLDPAD-VPDHYLRFLSNSLRKALDLPGVPIRM 469          
The following BLAST results are available for this feature:
BLAST of Gcaud8478.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6L6_9FLOR2.620e-28675.00GTPase Der n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
R7QJ22_CHOCR1.460e-21358.77GTPase Der n=1 Tax=Chondrus crispus TaxID=2769 Rep... [more]
UPI001E1D98414.190e-8951.59GTPase Der-like n=1 Tax=Mercenaria mercenaria TaxI... [more]
A0A239BU98_9PROT3.690e-7938.57GTPase Der n=3 Tax=Azospirillaceae TaxID=2829815 R... [more]
UPI001CCAB4702.370e-7836.62ribosome biogenesis GTPase Der n=1 Tax=Afifella sp... [more]
UPI0004137C185.180e-7837.57ribosome biogenesis GTPase Der n=1 Tax=Rubritepida... [more]
A0A7W6RFP1_9PROT1.060e-7737.23GTPase Der n=1 Tax=Roseospira visakhapatnamensis T... [more]
A0A560HCY9_9PROT1.080e-7737.50GTPase Der n=8 Tax=Nitrospirillum TaxID=1543705 Re... [more]
A0A7Y8MC09_9PROT1.560e-7737.22GTPase Der n=1 Tax=Alphaproteobacteria bacterium T... [more]
UPI00068541CD1.910e-7735.57ribosome biogenesis GTPase Der n=1 Tax=Geminicoccu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPRINTSPR00326GTP1OBGcoord: 384..402
score: 21.05
coord: 308..328
score: 51.97
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 47..212
e-value: 8.1E-16
score: 58.1
coord: 308..431
e-value: 1.4E-22
score: 79.9
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 43..189
e-value: 3.9
score: 7.6
coord: 304..455
e-value: 0.25
score: 19.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 41..260
e-value: 1.8E-31
score: 111.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 305..473
e-value: 1.3E-38
score: 134.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 43..121
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 167..470
IPR032859GTPase Der, C-terminal KH-domain-likePFAMPF14714KH_dom-likecoord: 495..576
e-value: 5.7E-13
score: 49.0
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 488..580
e-value: 1.6E-17
score: 65.4
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 308..469
e-value: 2.2E-21
score: 74.3
NoneNo IPR availablePANTHERPTHR43834GTPASE DERcoord: 45..582
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..584
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
IPR016484GTP-binding protein EngAHAMAPMF_00195GTPase_Dercoord: 44..581
score: 27.113071

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_412_length_26355_cov_4.423431contigNODE_412_length_26355_cov_4.423431:24133..25887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8478.t1Gcaud8478.t1Gracilaria caudata M_176_S67 malemRNANODE_412_length_26355_cov_4.423431 24133..25887 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8478.t1 ID=Gcaud8478.t1|Name=Gcaud8478.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=585bp
MRMRLLSVVRALHADARAGATARVAVPAAGARSAPAPTVYAHTRLTAALV
GRPNVGKSTLFNRLAAAVRGRQTDADGSPPLAFVRSVVHPLPGVTRDSRE
AAGAVADLLLKVVDTPGLESAVGLQEPVRAADDVPFAEGTSLVDAVAHCE
HVAYRRVYAHMKAATISAVHHSNLILFIIDASVGVTALDHAHAKWLRSVL
TPQKSLILVANKCDVADSDKRAIDAYELGFGDPVLISAEQALGFADLYER
IRHVPALPAIEHKPPQPAEDSPSDVSDAEIQIRQSFDDELVISTSARLRE
QPLRQLIVSIVGRPNVGKSTLLNRLVGEQRSIVAAAAGVTRDAVLCPWNA
QYERPEYPPVWLVDTPGVRAETKVSSDNLERLMVRASLQALRSSHVVVVV
MDATESLTRQDLKLMDVIITEGRAVVLVLNKMDALHESDMADWRARLRYE
VDNKLEQLKGVEVVEMSAKYWEDDPTQGKRLYDAVQRARGRWERRVPTSA
LNRFVKNFNERMSVGGGTRGERRNRIGVTKFITQKKIRPPMFRLDGSSAV
SMNYLRSLSNAIRHEFGFEGVPIRVKRPSRRKKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP-bd
IPR003593AAA+_ATPase
IPR027417P-loop_NTPase
IPR032859KH_dom-like
IPR015946KH_dom-like_a/b
IPR005225Small_GTP-bd_dom
IPR016484GTP-bd_EngA