Gcaud8477.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8477.t1
Unique NameGcaud8477.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length162
Homology
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BLAST of Gcaud8477.t1 vs. uniprot
Match: A0A2V3J6S8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6S8_9FLOR)

HSP 1 Score: 211 bits (536), Expect = 8.350e-67
Identity = 104/160 (65.00%), Postives = 129/160 (80.62%), Query Frame = 0 
Query:    1 MSLLGPTVSIYIYHQLYNLFEKHGPLLSARFQTVVKKLNSNIDNGSESGRLRSIPQSSRKEDNPFVLKIANEVIRITNMRLREKAVVSRIQMDDDQYELSRRHAASDVARVAINVLEDVLKDGCGAALDSEEKLAVQSMIKGSIAQYSMNRSWHNRLFRV 160
            +S+LGPTV++Y+Y++ YNL EKHGP++SAR Q  ++ L S+ D+G  +GRLRSI QS R ++NP+VLKIANEVIRITN+RLREKAVVSRIQMDDDQYELSRRHAASDV R+   VLEDVL +G G  L+  EK AV++MIKGSI Q+ M+RS H    RV
Sbjct:   43 LSVLGPTVTLYLYNKFYNLCEKHGPIMSARIQAAMRALESDSDSGMATGRLRSISQSKRHKENPYVLKIANEVIRITNVRLREKAVVSRIQMDDDQYELSRRHAASDVTRITSRVLEDVLSNGSGTILNENEKAAVRAMIKGSITQHHMDRSRHGNFLRV 202
The following BLAST results are available for this feature:
BLAST of Gcaud8477.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6S8_9FLOR8.350e-6765.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_412_length_26355_cov_4.423431contigNODE_412_length_26355_cov_4.423431:23517..24002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8477.t1Gcaud8477.t1Gracilaria caudata M_176_S67 malemRNANODE_412_length_26355_cov_4.423431 23517..24002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8477.t1 ID=Gcaud8477.t1|Name=Gcaud8477.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=162bp
MSLLGPTVSIYIYHQLYNLFEKHGPLLSARFQTVVKKLNSNIDNGSESGR
LRSIPQSSRKEDNPFVLKIANEVIRITNMRLREKAVVSRIQMDDDQYELS
RRHAASDVARVAINVLEDVLKDGCGAALDSEEKLAVQSMIKGSIAQYSMN
RSWHNRLFRVM*
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