Gcaud8431.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8431.t1
Unique NameGcaud8431.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length202
Homology
BLAST of Gcaud8431.t1 vs. uniprot
Match: A0A2V3J1Q5_9FLOR (Protein MON2-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Q5_9FLOR)

HSP 1 Score: 247 bits (631), Expect = 2.740e-72
Identity = 132/197 (67.01%), Postives = 155/197 (78.68%), Query Frame = 0
Query:    1 MVSSSTQRAQGGNILNIGESS-GVNRKEKVEENSEPLWIQATEVVIVAMKEGSEERGTYTNDEIWQEFGKLVTDMLFKERKRGYEKNYTAGERERREANDMRLVECVKDGLSRMGSSTSGTTKQSLVRLVARGAEEGQSRGRSRFLRGCQKKLFQLADGAEENKTPVNIKEECGKCVVETCSRVLGQYNADGHRAVK 196
            MVSSS+      N +++G+ + G+   +K  E S+PLW+QATEVVI AMK GSEE     ++EIWQEFGKLV DMLFKERK  YE  +   ERE+RE+N++RL+ECVKDGLSRMGS TS  TKQ LVR++ARGAEEGQSRGR RF+RGCQKKLFQLADGA +N    NIKEECG CVVETCS+VLGQYNADGHRA K
Sbjct: 1338 MVSSSSPHYNK-NKVSVGDRNMGI---KKGPETSQPLWMQATEVVITAMKRGSEECSPDLSEEIWQEFGKLVNDMLFKERKYSYENKHIIEEREQRESNEIRLIECVKDGLSRMGSETSLATKQRLVRIIARGAEEGQSRGRPRFVRGCQKKLFQLADGATQNGEDANIKEECGDCVVETCSKVLGQYNADGHRAGK 1530          
BLAST of Gcaud8431.t1 vs. uniprot
Match: R7QQH4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQH4_CHOCR)

HSP 1 Score: 126 bits (316), Expect = 5.570e-30
Identity = 80/199 (40.20%), Postives = 113/199 (56.78%), Query Frame = 0
Query:    5 STQRAQGGNILNIGESSGVNRKEKVEENSEPLWIQATEVVIVAMKEGSEERGTYTNDEIWQEFGKLVTDMLFKERKRGYEKNYTAG--ERERREANDMRLVECVKDGLSRMGSSTSGT-TKQSLVRLVARGAEEGQSRGRSRFLRGCQKKLFQLADGAEENKTPVN------IKEECGKCVVETCSRVLGQYNADGHRA 194
            S+ R+ G  I+ I   SG            PLWI ATEVV++AMK G++ +    +DE+W  F  +V + L+   +   E  Y     E +R E  D+ L  CV++ LS M   TS   T++ LV L+A+GAEEG++ GR R++R CQK+LF+LA G    +  VN      + E+  +CVVE C RVLGQ+ ADG RA
Sbjct: 1428 SSSRSNGAYIVPIDSQSGA-----------PLWISATEVVMMAMKCGNDYQYGAHSDEVWDAFVGIVEEFLYSPHRVQREPEYRRDIEEGDRAEKCDIILTGCVQEALSAMDLKTSSPKTQRRLVGLLAKGAEEGKASGRPRYVRSCQKRLFKLASGVWAGRVEVNAELVESVAEDSNQCVVEMCGRVLGQFIADGQRA 1615          
The following BLAST results are available for this feature:
BLAST of Gcaud8431.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1Q5_9FLOR2.740e-7267.01Protein MON2-like n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QQH4_CHOCR5.570e-3040.20Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_248_length_34309_cov_4.396809contigNODE_248_length_34309_cov_4.396809:32871..33532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8431.t1Gcaud8431.t1Gracilaria caudata M_176_S67 malemRNANODE_248_length_34309_cov_4.396809 32871..33532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8431.t1 ID=Gcaud8431.t1|Name=Gcaud8431.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=202bp
MVSSSTQRAQGGNILNIGESSGVNRKEKVEENSEPLWIQATEVVIVAMKE
GSEERGTYTNDEIWQEFGKLVTDMLFKERKRGYEKNYTAGERERREANDM
RLVECVKDGLSRMGSSTSGTTKQSLVRLVARGAEEGQSRGRSRFLRGCQK
KLFQLADGAEENKTPVNIKEECGKCVVETCSRVLGQYNADGHRAVKKDET
N*
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