Gcaud8412.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud8412.t1 vs. uniprot
Match: A0A2V3IGK2_9FLOR (Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK2_9FLOR) HSP 1 Score: 199 bits (507), Expect = 9.320e-57 Identity = 93/143 (65.03%), Postives = 113/143 (79.02%), Query Frame = 0
Query: 283 CELAFDECEFTFYGESGLATFSVDGPPDKSFTPVIVAKDPDVHLGTLNSNNVVPEFIDDSGAHPITHFGSQRFAPTQFKPYYIWQQQGSGIGHQTFHADQQELSKGRCIRIFFTHIQ--LKDPYSNLNHVPRSENKCVVFRTE 423
C AFDECEFTF G++GL+TFS+ G PD+SFTP IV+KD V LG LNSNN+VPEFI+D+G PIT+FGSQRF PT FKPY + QGSGIGHQTFH +Q++++K RCIR++FTH Q + N N VPRSENKCVVFRT+
Sbjct: 211 CSKAFDECEFTFRGKTGLSTFSIAGRPDRSFTPRIVSKDASVRLGVLNSNNIVPEFIEDNGVFPITNFGSQRFTPTHFKPYTLMNGQGSGIGHQTFHGNQKQVAKDRCIRVYFTHFQEIRNNKLINRNDVPRSENKCVVFRTQ 353
BLAST of Gcaud8412.t1 vs. uniprot
Match: A0A2V3IQI6_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQI6_9FLOR) HSP 1 Score: 167 bits (423), Expect = 2.410e-44 Identity = 82/149 (55.03%), Postives = 104/149 (69.80%), Query Frame = 0
Query: 280 KDSCELAFDECEFTFYGESGL--ATFSVDGPPDKSFTPVIVAKDPDVHLGTLNSNNVVPEFIDDSGAHPITHFGSQRFAPTQFKPYYIWQQQGSGIGHQTFHADQQELSKGRCIRIFFTHIQLKDPYS---NLNHVPRSENKCVVFRTE 423
K CE A+D+C F F G +G A FS+ G PDKSFTP +V K LGTLN+NNVVPEFI+ + PIT FGSQRF PT FKPY+I +++GSG+GHQTF +Q E++ +C+R++FT Q P N N+VP SENKCVVFRT+
Sbjct: 211 KTECEKAYDKCLFKFSGVNGFNNAIFSIAGEPDKSFTPRVVPKATTYSLGTLNTNNVVPEFIEGNQGRPITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLEVANDKCVRVYFTSFQEVPPNGQVVNRNNVPTSENKCVVFRTK 359
BLAST of Gcaud8412.t1 vs. uniprot
Match: A0A2V3IGH1_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH1_9FLOR) HSP 1 Score: 154 bits (388), Expect = 2.890e-39 Identity = 77/149 (51.68%), Postives = 101/149 (67.79%), Query Frame = 0
Query: 280 KDSCELAFDECEFTFYG--ESGLATFSVDGPPDKSFTPVIVAKDPDVHLGTLNSNNVVPEFIDDSGAHPITHFGSQRFAPTQFKPYYIWQQQGSGIGHQTFHADQQELSKGRCIRIFFTHIQ---LKDPYSNLNHVPRSENKCVVFRTE 423
K CE A+++C F F G + A FS+ G PDKS TP +V K LGTLN+NNVVPEFI+++ IT FGSQRF PT FKPY+I +++GSG+GHQTF +Q EL+ +C+R++FT Q N N+VP SE+KCVVFRT+
Sbjct: 212 KTECEKAYNKCLFKFSGIDDFNNAIFSIAGEPDKSMTPQVVPKATTYSLGTLNTNNVVPEFIEENQVSLITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLELANDKCVRLYFTSFQEISQNGQVVNRNNVPTSEHKCVVFRTK 360
BLAST of Gcaud8412.t1 vs. uniprot
Match: A0A2V3IP66_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR) HSP 1 Score: 135 bits (339), Expect = 6.410e-31 Identity = 73/158 (46.20%), Postives = 106/158 (67.09%), Query Frame = 0
Query: 273 PPPTPIPK-DSCELAFDECEFTFYGESGLATFSVDGPPDKSFTPVIVAKDPDVHLGTLNSNNVVPEFIDDSGAHP-ITHF-GSQRFAPTQFKPYYIWQQQGSGIGHQTFHADQQELSKGRCIRIFFTHIQLKD---PYSNLNHVP--RSENKCVVFRT 422
P PTP P D C+ A+D C F F E+ + FSVDGP + +F+PVI +++ + +LG LNSNN+ E + G + IT SQ F+ TQFKP+ + +GSGIGH+TF ADQ+E+ +GRC+R+FF+H QL + P++ + +V R +NKCVVF+T
Sbjct: 444 PTPTPEPVVDKCQQAYDLCGFYFGNETDVPVFSVDGPDNVAFSPVIESRNDNENLGVLNSNNLEVEIFEGDGNYVGITSLPASQTFSRTQFKPFSLSNTKGSGIGHETFQADQREVIRGRCVRVFFSHFQLLELTPPFNVVGNVVAGREDNKCVVFKT 601
BLAST of Gcaud8412.t1 vs. uniprot
Match: A0A2V3J5W6_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR) HSP 1 Score: 130 bits (326), Expect = 1.950e-29 Identity = 69/158 (43.67%), Postives = 99/158 (62.66%), Query Frame = 0
Query: 274 PPTPIPKDSCELAFDECEFTFYGESGLATFSVDGPPDKSFTPVIVAKDPDVHLGTLNSNNVVPEFIDDSGAHPITHF--GSQRFAPTQFKPYYIWQQQGSGIGHQTFHADQQELSKGRCIRIFFTHIQLKDP------YSNLNHVPRSENKCVVFRTE 423
PPT D+CE A+ +C+F F+ + TF++ G PDK FTP IV++ P V +G LN+N ++PEFI+ G+ + FAPTQFKP I GSG+G+QTF +Q ++ RC+R+FFT QL +P +N+N R++NKCVVFRT+
Sbjct: 372 PPT---LDACEQAYQDCDFAFFDTPVVPTFTLGGNPDKPFTPRIVSRIPGVVVGVLNTNGIIPEFIESDGSVDLITSTPAIPMFAPTQFKPLSIPDDIGSGVGYQTFQGNQLVEARNRCVRLFFTSFQLLEPTPPFSVIANIN-ADRTDNKCVVFRTD 525
BLAST of Gcaud8412.t1 vs. uniprot
Match: A0A2V3ITP9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITP9_9FLOR) HSP 1 Score: 98.6 bits (244), Expect = 7.350e-19 Identity = 75/268 (27.99%), Postives = 137/268 (51.12%), Query Frame = 0
Query: 12 YDSIPVRPEAAHVS----LRGGVRDRLSS-FARSSSTPLVIKAVAALSVVIASVFVLSSPCLSCDLLTFKHRIFNLAPIRFLVAPTYAHQALSYARSYDPHLLGSYERH--PSKALRHF-SKPSASYLERQLPVSQQEDPFVIEEFIGTRKCSGLRRCRVRLIVRKDEYGVTVQAGYNISSWKATPVDVDDVTQERIKAITTAEWYRWAFALVSRVSGELLELDCPISIIDVIHAFAETSIPASHCPSTDDPRCHQLITIAKCPHEVE 271
Y+SIP P +V+ L+ G R++ + F+ S ++ + + ++A +F++++ L +L F + L P LS +R+ +P + H + H+ ++ S S L + + E V +E + TR CS CR RL+V K++ G+TVQAGY I + ++ + + T++R+KA+T E +WA L+ ++ +L E+DC +S+ + A ET + C +TDD C +L+T+ +C +VE
Sbjct: 6 YNSIPQNPAPGNVTAASPLKHGSRNQANGRFSFPSVGRKLLSLLTIAAALVAVIFLVNNYVL--ELPRFSYHESRLVP------------RLSTSRNSNPFHFDAVHSHLYSDRKFSHWKARSSVSLLHSAIRSNICEVDSVTQEAVPTRDCSVGLWCRARLVVTKNDAGITVQAGYYIYTKRSKTMPITAQTKKRVKAVTPNEATKWAETLLEQLGTKLGEVDCNVSVSMIADAIMETKDVVASCSNTDDSLCSELVTLRECSCQVE 259 The following BLAST results are available for this feature:
BLAST of Gcaud8412.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud8412.t1 ID=Gcaud8412.t1|Name=Gcaud8412.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=424bpback to top |