Gcaud8405.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud8405.t1
Unique Name	Gcaud8405.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	356

Homology

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BLAST of Gcaud8405.t1 vs. uniprot
Match: A0A2V3J1T5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1T5_9FLOR)

HSP 1 Score: 135 bits (341), Expect = 1.720e-33
Identity = 119/300 (39.67%), Postives = 157/300 (52.33%), Query Frame = 0

Query:   14 PRRILRPAVAPPPVITPRRL-PVSRAVSDRACVRSAPRRLACA--------------RVDALLNEETSDKQEVRACFEEAGCGELEDERAMRSPVDQISCTPSRADNDEWLAQFGIDISLLRIYDSEEEGERVQPV-DENQHPNITP--SRRTSAPESPATFELSIKSEPFQLHSAFPSPAATAAYLPARLPHSPQQQVVNTDP-ITPRRLHSSGSRRHSVKISHRELISLT---DAPP---SVQPAAHPQKLNPPQPKQPSPTELSAANTSTGSNVFLTPVRASRKQRLQLGADTIVTP 288
            PRR+  PAV   P+ TPRR+ P SR+ +      +APRR+  A               + A L   T    +  A     G  +++  +    P+D IS TPS+ +ND+WL  FGIDISLL +YDS+EE      + DEN HPNITP  SR+ + P++            ++L      P+A    +P R   S Q  +  +   +TPRRLH S SRR S+ IS REL SL    D  P   S   ++HP ++       P PT   A  +  G+NVFLTPVRASRKQR QLGADTIVTP
Sbjct:   14 PRRVALPAVVVTPLRTPRRIVPPSRSATTTPRSHTAPRRVIGAVSQDTHTPHRPRTPTLSASLAVNTFRGFDFDADCSSEGSADVDSIQ----PIDIISSTPSKRENDDWLRAFGIDISLLNLYDSDEEQPPHSLICDENHHPNITPTSSRQCTVPDA------------YELRPVHNPPSAAHTAVPRR---SEQLSIPESSTSVTPRRLHLS-SRRQSMMISQRELGSLAAALDLEPLNSSSSQSSHPVQM-------PLPT---AKTSKAGTNVFLTPVRASRKQRAQLGADTIVTP 283

The following BLAST results are available for this feature:

BLAST of Gcaud8405.t1 vs. uniprot

BLAST of Gcaud8405.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J1T5_9FLOR	1.720e-33	39.67	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..153

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1098_length_13905_cov_4.567830	contig	NODE_1098_length_13905_cov_4.567830:3672..4985 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud8405.t1	Gcaud8405.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1098_length_13905_cov_4.567830 3672..4985 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud8405.t1 ID=Gcaud8405.t1|Name=Gcaud8405.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=356bp
MTSPPRHARATPQPRRILRPAVAPPPVITPRRLPVSRAVSDRACVRSAPR
RLACARVDALLNEETSDKQEVRACFEEAGCGELEDERAMRSPVDQISCTP
SRADNDEWLAQFGIDISLLRIYDSEEEGERVQPVDENQHPNITPSRRTSA
PESPATFELSIKSEPFQLHSAFPSPAATAAYLPARLPHSPQQQVVNTDPI
TPRRLHSSGSRRHSVKISHRELISLTDAPPSVQPAAHPQKLNPPQPKQPS
PTELSAANTSTGSNVFLTPVRASRKQRLQLGADTIVTPLVLECWNNLVSV
TLLIILFNDHVTHLQRYKGYPTCTETSLVSSSLRLPSSPESCVRRILSLS
FGRSF*