Gcaud84.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud84.t1
Unique NameGcaud84.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length531
Homology
BLAST of Gcaud84.t1 vs. uniprot
Match: A0A2V3IHA2_9FLOR (Protein lin-54-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHA2_9FLOR)

HSP 1 Score: 286 bits (732), Expect = 6.370e-88
Identity = 225/564 (39.89%), Postives = 272/564 (48.23%), Query Frame = 0
Query:    1 MPEPRTPVKRSSSALPALHSPLCAPS--PDPLFA-ASFSTPQPSPSAARFNPDDLLVSPXXXXXXPDLRRKLFAAADALFPPASCVRAHSSIASLSXXXXXXLMRTPGAANAREAPLAGSTHGAENTRKQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHTRAPQNTPLQLTAIKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKARSAVLSRDPRAFEPRVKLASAAADIHTKGCNCRKGCSKKYCVCRELKVTCGPRCTCSGPKGCQNGKNASSSSGT--QLTTTRPTFSRLK--------------------------KRNHIEQLTPPSPLHA-IATAFSPGFPPLAALSPPLKLSDDPFDELRDVMTDHNDPLVSPDAIKTRNACSSFIPPVNRRIALDDDAFQDDAQLSVGTQRKAGAXXXXXXXXXXXXXNASNTPKSALKLAA-VELDCSPTTGVKAL---TSPSKTRSAATGGSLRRADKIEKFSRPRL-PRILRVKMGTGRALRRFN 527
            M EP TP+ R S   P    P+  PS  PDPLFA ASF+TPQ SPSAARFNPDDLLVSP XX   PDLRRKLFAA D   P  S                     TP        P                                                                            +H      TP  +     N +      L+                      P++  AV++ARS VLSRDPRAFEPR+K A   +DIHTKGCNCRKGCSK YCVCREL+V CGPRCTCSGP GCQN    S  +    QL +  P+ +                             KRNH+E LTPPSPL A  + AFSPGF PL ALSPPLKL DDPFD+L++VM+D NDPL+SP+A+  R +     PPVNRRI LDDD     + L V  +                   +S TPK A+K+++ ++L+ SPTT  K     ++PSK RS  +  SLR+ D+I+K SRPRL PRILRVKMG+GRAL+RF+
Sbjct:    1 MTEPTTPL-RPSPTRPI--DPILGPSSSPDPLFAGASFATPQLSPSAARFNPDDLLVSPPXXPATPDLRRKLFAAPDPFIPHPS---------------------TPPTPTPPRRP----------------------------------------------------------------------------AHRPLLTPTPHHIPIPPRNLRTKSMSSLH--------------------RAPNSDLAVRQARSTVLSRDPRAFEPRIKAAPTTSDIHTKGCNCRKGCSKNYCVCRELRVACGPRCTCSGPNGCQNRSVHSERNNLSEQLRSKLPSVATAXXXXXXXXXXVEAGSGGAHGRKPVVSAKRNHLEHLTPPSPLPAAFSAAFSPGFLPLTALSPPLKLPDDPFDDLQNVMSDPNDPLISPEAMNPRTSHPILAPPVNRRITLDDDL----SLLPVDNKS-----------VDCLIGASSCTPKHAVKISSSLDLNSSPTTDGKLFRTNSTPSKLRSGLSY-SLRQTDRIDKCSRPRLLPRILRVKMGSGRALKRFH 428          
BLAST of Gcaud84.t1 vs. uniprot
Match: R7QCU4_CHOCR (CRC domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCU4_CHOCR)

HSP 1 Score: 180 bits (456), Expect = 2.390e-47
Identity = 81/114 (71.05%), Postives = 95/114 (83.33%), Query Frame = 0
Query:  206 KCNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKARSAVLSRDPRAFEPRVK--LASAAADIHTKGCNCRKGCSKKYCVCRELKVTCGPRCTCSGPKGCQNGKN 317
            KC+CKAS+CLKLYCPCFASS  C P CTC+NC+N+  T T+V  AR  VL+RDPRAFEP+V+  LA+A+ DIH KGCNCRKGC+K YCVCREL+V CGPRCTCSGP GC NGK+
Sbjct:    9 KCSCKASKCLKLYCPCFASSGFCGPDCTCKNCQNSQLTATSVHDARETVLARDPRAFEPKVRNSLATASGDIHIKGCNCRKGCAKNYCVCRELRVDCGPRCTCSGPNGCLNGKS 122          
BLAST of Gcaud84.t1 vs. uniprot
Match: A0A3M7KVS9_AUXPR (CRC domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KVS9_AUXPR)

HSP 1 Score: 115 bits (287), Expect = 1.760e-23
Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 0
Query:  199 PLQLTAIKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKARSAVLSRDPRAFEPRVKLASAAADI-HTKGCNCRK-GCSKKYCVCRELKVTCGPRCTCSGPKGC 312
            P    A KCNCK S+CLKLYC CFA +  C P CTC +C N      AV++ R A+L R+P AF+ ++      + + H +GCNC+K GC KKYC C +  + CG  C C G K C
Sbjct:  248 PFPTGARKCNCKKSKCLKLYCDCFAGNGFCGPACTCVSCANREDNRGAVQQQREAILIRNPNAFDQKIAAVDVESGVQHRRGCNCKKSGCIKKYCECFQAGIACGEHCKCEGCKNC 363          
BLAST of Gcaud84.t1 vs. uniprot
Match: A0A1D2ADM9_AUXPR (CRC domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2ADM9_AUXPR)

HSP 1 Score: 115 bits (287), Expect = 2.960e-23
Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 0
Query:  199 PLQLTAIKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKARSAVLSRDPRAFEPRVKLASAAADI-HTKGCNCRK-GCSKKYCVCRELKVTCGPRCTCSGPKGC 312
            P    A KCNCK S+CLKLYC CFA +  C P CTC +C N      AV++ R A+L R+P AF+ ++      + + H +GCNC+K GC KKYC C +  + CG  C C G K C
Sbjct:  538 PFPTGARKCNCKKSKCLKLYCDCFAGNGFCGPACTCVSCANREDNRGAVQQQREAILIRNPNAFDQKIAAVDVESGVQHRRGCNCKKSGCIKKYCECFQAGIACGEHCKCEGCKNC 653          
BLAST of Gcaud84.t1 vs. uniprot
Match: A0A087SHD9_AUXPR (Lin-54-like protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SHD9_AUXPR)

HSP 1 Score: 106 bits (264), Expect = 2.040e-22
Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 0
Query:  199 PLQLTAIKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKARSAVLSRDPRAFEPRVKLASAAADI-HTKGCNCRK-GCSKKYCVCRELKVTCGPRC 304
            P    A KCNCK S+CLKLYC CFA +  C P CTC +C N      AV++ R A+L R+P AF+ ++      + + H +GCNC+K GC KKYC C +  + CG  C
Sbjct:  100 PFPTGARKCNCKKSKCLKLYCDCFAGNGFCGPACTCVSCANREDNRGAVQQQREAILIRNPNAFDQKIAAVDVESGVQHRRGCNCKKSGCIKKYCECFQAGIACGEHC 207          
BLAST of Gcaud84.t1 vs. uniprot
Match: A0A7S4C148_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C148_CHRCT)

HSP 1 Score: 104 bits (260), Expect = 2.030e-21
Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = 0
Query:  197 NTPLQLTAIKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKARSAVLSRDPRAFEPRVKLASAAADI--HTKGCNCRK-GCSKKYCVCRELKVTCGPRCTCS 307
            N P+++   +CNC+ SRCLKLYC CFAS   C   C CQ C N P      K+A  + L R+P AF P++   +A  D+  HTKGC+C+K GC KKYC C +  + C   C CS
Sbjct:   18 NDPVEMKRKQCNCRNSRCLKLYCECFASGQYCFG-CNCQGCHNNPENDEKRKRAIESTLERNPSAFRPKINHNAAETDLGRHTKGCHCKKSGCLKKYCECFQAGIMCTAACKCS 130          
BLAST of Gcaud84.t1 vs. uniprot
Match: R7QIV8_CHOCR (CRC domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIV8_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 2.120e-21
Identity = 61/131 (46.56%), Postives = 70/131 (53.44%), Query Frame = 0
Query:  207 CNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKARSAVLSRDPRAFEPRVKLAS----AAADIHTKGCNCRK-GCSKKYCVCRELKVTCGPRCTC------SGPKGCQNGKNASSSSGTQL 326
            CNCK SRCLKLYC CFA S VC   C C NCRN  H  T  + A  A+L R+P AF+P+VK  +       D H KGCNCRK GC K YC C ++ V C   C C       G     N K   S+ G  L
Sbjct:  315 CNCKNSRCLKLYCECFAKSLVCGDRCHCHNCRNNGHYPTEKRLAVQAILERNPTAFQPKVKRKAKGEKVVRDKHHKGCNCRKSGCLKGYCECFQMGVLCSELCKCVNCRNFEGSAAAINAKAGRSAGGHSL 445          
BLAST of Gcaud84.t1 vs. uniprot
Match: A0A7S3AJR0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJR0_9EUKA)

HSP 1 Score: 101 bits (251), Expect = 3.890e-21
Identity = 50/105 (47.62%), Postives = 62/105 (59.05%), Query Frame = 0
Query:  207 CNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKARSAVLSRDPRAFEPRVKLASAAADIHTKGCNCRKG-CSKKYCVCRELKVTCGPRCTCSGPK 310
            CNCK SRCLKLYC CFAS   C   C CQ+C N P      K+A  + L R+P+AF P++  A      HT+GC+CRK  C KKYC C +  + C   C C+G K
Sbjct:    7 CNCKNSRCLKLYCECFASGQYCL-ACNCQSCHNNPENDDKRKRAIKSTLERNPQAFRPKINHAGDTLRRHTRGCHCRKSSCLKKYCECFQGGIKCTAMCKCAGCK 110          
BLAST of Gcaud84.t1 vs. uniprot
Match: A0A7S1XFU9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFU9_9RHOD)

HSP 1 Score: 103 bits (256), Expect = 8.390e-21
Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = 0
Query:  189 VSHTRAPQNTPLQLTAIKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKARSAVLSRDPRAFEPRVKLASAAADI--HTKGCNCRK-GCSKKYCVCRELKVTCGPRCTC 306
            +S  R+ +   L  +A +CNC+ SRCLKLYC CFA+   C   C C NC+N   T T  K+A   VL+R+P AF P+V+ ++   +   H KGC+C+K GC KKYC C +  V C   C C
Sbjct:   23 LSCPRSDRELDLGESAKRCNCRNSRCLKLYCECFAAGGYCGKGCNCVNCQNKRETDTIRKQAIQLVLARNPNAFRPKVEASALVPEDVKHKKGCHCKKSGCLKKYCECYQAGVICSELCKC 143          
BLAST of Gcaud84.t1 vs. uniprot
Match: A4S357_OSTLU (CRC domain-containing protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S357_OSTLU)

HSP 1 Score: 106 bits (264), Expect = 9.060e-21
Identity = 59/143 (41.26%), Postives = 79/143 (55.24%), Query Frame = 0
Query:  206 KCNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKARSAVLSRDPRAFEPRVKLASAAADI-HTKGCNCRKG-CSKKYCVCRELKVTCGPRCTCSGPKGCQNGKNASSSSGTQLTTTRPTFSRLKKRNHIEQLT 346
            KCNCK S+CLKLYC CFA+ A C   C+CQ C+NT      V K R  +  R+P AFE ++ +A A  D  HTKGC+C+K  C KKYC C +  V C   C C G K   NG + +   G     ++ + S+ + R  +   T
Sbjct:  196 KCNCKKSKCLKLYCECFAAGAFCKD-CSCQQCQNTTENEAIVTKTRQQIEQRNPYAFESKI-MADAGDDARHTKGCHCKKSACLKKYCECFQAGVKCQDYCKCEGCKNNDNGPSPALPRGGAAKASKVSKSKARSRETVAATT 336          
The following BLAST results are available for this feature:
BLAST of Gcaud84.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHA2_9FLOR6.370e-8839.89Protein lin-54-like n=1 Tax=Gracilariopsis chorda ... [more]
R7QCU4_CHOCR2.390e-4771.05CRC domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A3M7KVS9_AUXPR1.760e-2345.69CRC domain-containing protein n=1 Tax=Auxenochlore... [more]
A0A1D2ADM9_AUXPR2.960e-2345.69CRC domain-containing protein n=2 Tax=Auxenochlore... [more]
A0A087SHD9_AUXPR2.040e-2245.37Lin-54-like protein n=1 Tax=Auxenochlorella protot... [more]
A0A7S4C148_CHRCT2.030e-2145.61Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
R7QIV8_CHOCR2.120e-2146.56CRC domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S3AJR0_9EUKA3.890e-2147.62Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S1XFU9_9RHOD8.390e-2143.80Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A4S357_OSTLU9.060e-2141.26CRC domain-containing protein n=2 Tax=Ostreococcus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 202..243
e-value: 1.2E-10
score: 51.3
coord: 275..318
e-value: 5.9E-8
score: 42.4
IPR005172CRC domainPFAMPF03638TCRcoord: 206..240
e-value: 4.8E-11
score: 42.8
IPR005172CRC domainPROSITEPS51634CRCcoord: 203..317
score: 25.556971
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..530
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 128..196
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 109..441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_5138_length_1764_cov_2.744770contigNODE_5138_length_1764_cov_2.744770:66..1658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud84.t1Gcaud84.t1Gracilaria caudata M_176_S67 malemRNANODE_5138_length_1764_cov_2.744770 66..1658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud84.t1 ID=Gcaud84.t1|Name=Gcaud84.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=531bp
MPEPRTPVKRSSSALPALHSPLCAPSPDPLFAASFSTPQPSPSAARFNPD
DLLVSPPPPASTPDLRRKLFAAADALFPPASCVRAHSSIASLSPPPPPPL
MRTPGAANAREAPLAGSTHGAENTRKQSRSQSQPQSQSQSQSQSQSQSQQ
HTQPQPQPQPQPQPQPQPQPQPQPQPPVADANADADASVSHTRAPQNTPL
QLTAIKCNCKASRCLKLYCPCFASSAVCAPTCTCQNCRNTPHTYTAVKKA
RSAVLSRDPRAFEPRVKLASAAADIHTKGCNCRKGCSKKYCVCRELKVTC
GPRCTCSGPKGCQNGKNASSSSGTQLTTTRPTFSRLKKRNHIEQLTPPSP
LHAIATAFSPGFPPLAALSPPLKLSDDPFDELRDVMTDHNDPLVSPDAIK
TRNACSSFIPPVNRRIALDDDAFQDDAQLSVGTQRKAGAGAAAAAAAAAA
AANASNTPKSALKLAAVELDCSPTTGVKALTSPSKTRSAATGGSLRRADK
IEKFSRPRLPRILRVKMGTGRALRRFNSMI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam