Gcaud8399.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8399.t1
Unique NameGcaud8399.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length140
Homology
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BLAST of Gcaud8399.t1 vs. uniprot
Match: A0A2V3J6W4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6W4_9FLOR)

HSP 1 Score: 95.1 bits (235), Expect = 4.940e-20
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = 0 
Query:   22 DIKEQTVHNVLQNREFSLKDEADRLLLRAVMGNFKRGPLDVSVWDTVTSKHIYPLNRNDDLDDIMTTVVVEEGRS---ESMLYALTQSTIPEVIVENDLDIFERTKGHDVLHKALIETRAL 139
            DI+E  +  +LQ++EFS   EADR+LLR+++G+ K G LDV  WD V SK+  P+N+N  LD ++T ++     +   ES++YA++ ST    IVE  LD+FER +G   L  A+ +  A+
Sbjct:  560 DIQEDNLRIILQSQEFSFDVEADRILLRSIIGHCKHGDLDVHAWDLVASKYRNPINKNVQLDLVITGLITARDTADPCESLIYAISNSTRCHEIVECLLDVFERQEGRKALFNAMRDNGAI 680
The following BLAST results are available for this feature:
BLAST of Gcaud8399.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6W4_9FLOR4.940e-2041.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1606_length_9532_cov_4.710306contigNODE_1606_length_9532_cov_4.710306:185..701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8399.t1Gcaud8399.t1Gracilaria caudata M_176_S67 malemRNANODE_1606_length_9532_cov_4.710306 185..701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8399.t1 ID=Gcaud8399.t1|Name=Gcaud8399.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=140bp
MSVWGATRRSAVTPSPSETGHDIKEQTVHNVLQNREFSLKDEADRLLLRA
VMGNFKRGPLDVSVWDTVTSKHIYPLNRNDDLDDIMTTVVVEEGRSESML
YALTQSTIPEVIVENDLDIFERTKGHDVLHKALIETRALS
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