Gcaud8395.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8395.t2
Unique NameGcaud8395.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length524
Homology
BLAST of Gcaud8395.t2 vs. uniprot
Match: A0A2V3IXV2_9FLOR (Pentatricopeptide repeat-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXV2_9FLOR)

HSP 1 Score: 553 bits (1425), Expect = 2.130e-188
Identity = 287/532 (53.95%), Postives = 371/532 (69.74%), Query Frame = 0
Query:    1 MHYHQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLSEEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLID---------DDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLMQTNKV-RPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFEEGWQVYVRMRSQGIPLNEYLVKYMTVQLSQSNRKAGPHQVQNCAQLLKDGLTDGINLKLLRKCRKKMLLELKNKRSQEALNKLADEPEFRPASEQIFDRHGWNRIDSGWRV 522
            M  H  +MGPFSYSVLLKSHGRA N+VAV S LAEI      +DS+L NSAVDALVRCN++G A+R+L+E+  +PLLDV SYNTIIKGFA  G V+DAFRV+  M +  C+PN +TRNTLL  CV+AG+ DRA  LID           +  L+P   P      SS+    + +    +SSS QL I +TSLM+GLAD+G++DEA++L   M+E ++ PS+ITYA+LIS+  R     +AR LF SF++D+L+SL VCNAY+SGLC S Q + V  AAA L+ MLS  + V PD+  FN L+DG V I +F +AE I+ +M +N+  RP   SYTI+MKGY D  QY  AK  FR++ RR  RPDR+ALNAFI +C+RSGD  AA RV+EHME +KGA  P  QSYSP+I SYMR  N+++ W+VY RMRSQGIPLNE+ ++ +T+Q         P   + CA+LLK GL DG+N+K+LRKCR+ ML +L N+RS+  L+ LA+EPEF   SEQIF RHGWN I+SGWR 
Sbjct:  177 MRAHGTQMGPFSYSVLLKSHGRAGNVVAVNSVLAEIQLHHTPVDSILFNSAVDALVRCNNMGAALRLLAEDEYRPLLDVASYNTIIKGFAGRGLVADAFRVLDRMNANHCTPNDVTRNTLLLACVQAGDLDRAKSLIDATDSNGGLYQQNNPLLPQQQPQHLSTASSTAKHTKPSPHQISSSSKQLRIGLTSLMAGLADSGQLDEAMRLMDHMRELHLPPSSITYAALISSCIRCKAFAQARSLFHSFVEDELVSLPVCNAYISGLCRSGQTEQVMQAAATLDAMLSGNVCVAPDVDCFNSLLDGLVRIRDFAKAEEIMEIMHSNRTFRPNIVSYTIMMKGYGDTRQYRKAKGIFREMWRRRQRPDRVALNAFIKICIRSGDRNAAIRVLEHMELKKGAVCPGIQSYSPIITSYMREDNYDKSWEVYKRMRSQGIPLNEHFIQLLTMQFFDREGHKKPKLTERCAELLKHGLNDGVNVKVLRKCRRLMLTKLPNQRSRNLLDHLANEPEFHSVSEQIFARHGWNEINSGWRA 708          
BLAST of Gcaud8395.t2 vs. uniprot
Match: A0A5J4Z316_PORPP (Pentatricopeptide repeat-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z316_PORPP)

HSP 1 Score: 201 bits (510), Expect = 1.530e-52
Identity = 150/536 (27.99%), Postives = 253/536 (47.20%), Query Frame = 0
Query:    1 MHYHQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLS----EEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGL------IDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSF--IDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFEEGWQVYVRMRSQGIPLNEYLVK-YMTVQLSQSNRKAGPHQVQNCAQLLKDGLTDGINLKLLRKCRKKMLLELKNKRSQEALNKLADEPEFRPASEQIFDRHGWNRIDSGWRVF 523
            M  H ++ GP++Y+ L+K++GR+ N V V+  L  +H + ++ D V LN+A+DALVRC  +  A ++LS    E + +P  +V SYNT++KG A LG V +AF + + M      P+ +TRNTLL  CV    + RA  L      ID +  D +                                 IA  ++++GLA  GR  EA+++    +    +PSA T+ S+I+A     +  RA   F+    +  D +S     A + GL  + Q+ +++ A+ +L +M+ R+ P       FN LM+G+  + +    E                           A    G KR+F  L       D  +LNAF+   VR  +I  AERV++ ME+  G+  P+  +YS LI +Y+   + +  W VY R++S GI  N+ L++  + + + Q   +           + +D     +   ++++ ++K+ L  K+  S      +  +     AS++IF+RH WN I SG+R F
Sbjct:  317 MESHGVKAGPYAYAALIKAYGRSGNDVGVERTLQRMHTQRVQPDQVALNAAIDALVRCKKVKRAQKLLSSMPAEWSVQP--NVRSYNTVMKGLAELGLVDEAFALRKEMLDLGLEPSKVTRNTLLLACVNGNAWVRAQKLVFAIKSIDGNDIDDL---------------------------------IAYNTVINGLAQVGRFSEAIEVMNEFEAKGGRPSAETHTSIITAALAEEDMGRAWFFFRGMKRLGVDPLSTTY-RAMIRGLTLTGQQSSLRDASELLLEMV-RKFPTETGAIEFNTLMNGFAQVGDMNAVERXXXXXXXXXXXXXXXXXXXXXXXXXXARNLSGVKRSFAALRASRGPVDLTSLNAFVSALVRCDEIDLAERVVDEMERVGGSIRPDLITYSVLIHAYLSAADAKRAWPVYERLKSSGIKPNQRLLEDILRLSIGQRATRGSLLGASQLRVVFRDMDIAHVPTWVIKRWQRKLQLGAKSLGSDMPYQSVKSKKP--KASKEIFERHEWNEIQSGFRAF 813          
BLAST of Gcaud8395.t2 vs. uniprot
Match: A0A835YV31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV31_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.680e-28
Identity = 114/461 (24.73%), Postives = 195/461 (42.30%), Query Frame = 0
Query:    1 MHYHQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLSE-------------EANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGP-----------------GSSSTPQQRNNTKHHA--------SSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFI-----DDDLISLEVC-NAYMSGLCN--------------------SRQEQNVQVAAAVLNDMLSRQLPVFPDIH---------SFNCLMDGWVGIS--NFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLR-PDRIALNAFIMVCVRSGDIIAAERVIEHMEQ 385
            MH   +  G  ++ +L+K +GR      V +AL  + +  +  D V LN+AVDA VRC +L  A +++               ++     +  +YNT+IKG  + GR+ +AF  + AM  + C  + +T N+L+  CV  G+ DRA+ L+   SF +V   S                       GS  +                     ++    A T+++SG ADAG +  AL +   M+ + +  + +TY +L+ A  +      AR LF+        D  L    +  N  + GLC                      R ++++      L   +   L +  D+          + N ++DG V ++     +AE I +LM    + P + +Y+I++KGY   G    A+  F  L+R     PD +ALN+++  CVR GD+ AA   ++   Q
Sbjct:  123 MHDRGVPAGNVTHCILVKGYGRQRRAHRVDAALRGMRRARVAPDVVTLNAAVDAYVRCGELRRAEQVVRAMEASVLSSSGGGGDSGAVAPNTRTYNTLIKGLGKAGRLDEAFATLEAMAVSGCEADSVTANSLIDACVRCGQLDRAYALLLR-SFSVVSGGSXXXXXXIDXXXXXXXXXXXXASRGSIGSXXXXXXXXXXXXXXXXXXXGGAVPSVHAFTAVLSGFADAGDMARALTVLELMERSGVTANLVTYTALLGACVKAGALPEARRLFEGLRAKGQRDPALRPNTITYNTLIVGLCRLAEREEADMRQEWGGEGGVQDRADRDIMAPVCALPSGIQEALKLLLDMKHNGVAASETTINSILDGVVSLTPPRMAEAEAIRQLMTQLGLIPNSVTYSIMIKGYGRVGNLEAARAAFGALLRDPRACPDVVALNSYLDACVRCGDLPAALSTLDAAAQ 582          
BLAST of Gcaud8395.t2 vs. uniprot
Match: A0A7S1ESQ2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESQ2_9RHOD)

HSP 1 Score: 129 bits (325), Expect = 4.210e-28
Identity = 115/525 (21.90%), Postives = 202/525 (38.48%), Query Frame = 0
Query:    6 IEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLS----EEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILR-LMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFEEGWQVYVRMRSQGIPLNEYLVKYMTVQLSQSNRKAGPHQVQNCAQL---LKDGLTDGINLKLLRKCRKKMLLELKNKRSQEALNKLADEPEFRPASEQIFDRHGWNRIDSGWRV 522
            +     SYSV+LK++GRA N   ++  L  +  + ++ D ++ N+A+DAL+RCND   A  +LS    E   KP  +  SYNTI+KG A +  + +AF +   M++   +                                                                                                                                                GLC+S+Q   +  A  V ++M  R+ P   D+HS+N L+ G+V + N +  E++++ +M  +++ P   +YT L+ GY  A      +R FR++    +  DR ALNAFI   VR  D+  A R+   M+   G+ +P+  +Y+ LI   +  G  EE W +Y  M+   I ++  L+  + V     NR     +V    Q+   L+D    G   + + + R++     +  + + + + +      + A+++IF++HGWN  DSG+R 
Sbjct:  345 VSASAISYSVMLKAYGRAGNASGIQKTLDRMQAKSVKPDVIVFNTAIDALIRCNDFVCAREILSGMYSEWGFKP--NERSYNTILKGLAEMALLDEAFALRDEMETVGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLCSSQQSAQLNAAHTVFDEM-RRRFPDEIDVHSYNTLISGYVEMENMQAVEYLVKQMMIKHQLAPDVVTYTALLTGYGRARNLISTRRVFREMRASKVAVDRYALNAFIAAAVRCSDLDLAVRMYNEMKTAGGSLAPDMYTYAALICGLLHGGRPEEAWMLYESMKQSSIVMSTRLI--IDVARISLNRDVPRSKVLTADQIHIVLRDMERSGAPRRTVERWRREWRTIFQTPQQRTSYSPVNR----KSAAQRIFEQHGWNPFDSGFRA 832          
BLAST of Gcaud8395.t2 vs. uniprot
Match: A0A7S4EIM6_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EIM6_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.240e-24
Identity = 146/604 (24.17%), Postives = 251/604 (41.56%), Query Frame = 0
Query:    4 HQIEMGPFSYSVLLKSHGR---ANNI-VAVKSALA-EIHQRELRMDSVLLNSAVDALVRCNDL------------------GTAIRMLSEE---ANK-----------PLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPN-------HITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLE----VCNAYMSGLCNSRQ-----------EQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHIL--------RLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSG-DIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFE---EGWQVYVRMRSQGIPL-NEYLVKYMTVQLSQSNRKAGPH--QVQNCAQLLKDGLTDGINLKLLRKCRKKMLLELKNKRSQEALNKLADEPEF-----------RPASEQIFDRHGWNRIDSGWRV 522
            H   + P +YS+L+K +G+   + NI V ++ A A E  Q  ++ D++  NS +DA + C  L                  GT  R  S++   ++K           P  ++ SYN ++KG+AR G + DA  +   M+S     +       H+T NTL+   V A EF  A  ++D  +                        NTK   +S      A T+LM G A  G++ +A+ L   MKE  ++P+                   A  +         I+ +    + NAY+SGL    +           +  V  A  +L +M+  +  + PD ++   ++DG+         E +         R++ TN +R TTA    L++          A   FR++     RPD  A+NA I   VRSG + +A E    +         PN  S+S LI ++++ G F+      ++Y  MR Q   L ++ LV  +   +  ++R  G      +  A +L+D   + ++ +  +  R+KML+E  +  +    N   +E E            +     +F+RHGWN++DSG+R+
Sbjct:  400 HAPALSPVTYSILVKGYGKLCDSENIDVLLRHASATEEGQSIMKPDTIFFNSLMDAYINCRQLHKAQTILMFMIVNDKFINGTIDREFSDKDLSSSKNDFFTFPSRVCPSPNLRSYNILLKGYAREGLLEDALNLAEEMRSIGSRTSNPGQWWDHVTTNTLVQAAVAAKEFAIAQEILDQYTL--------------------SERNTKKSRNSDHPNADAYTTLMDGFAKDGKLKQAISLLKTMKEREVEPNEYHXXXXXXXXXXXXXXXXAEKMLVHVKTKGSIARKQLRVIYNAYISGLVQGNERNSVISGDDDHDNKVNNALTILREMIEER--IMPDANTIAIILDGFGHCLKPRMKEAMTLVEKLETQRIIPTNHIRVTTA----LVRVCGSCHSLDRAIICFRRIP----RPDVAAINALIDAAVRSGNEKVAVETFNRYFAGDIPRAVPNVISFSILIGAHIKKGTFDGSRAARELYQCMRFQRRILPDKGLVDIIAKGMVDTSRTCGVQASDARFVAGVLRDA--EKLDWEEGQLDRRKMLVE--SAMNNHVANAWEEEAELYGLWKKDGSRRKSDDNSMFERHGWNKVDSGFRL 969          
BLAST of Gcaud8395.t2 vs. uniprot
Match: A0A7S0LHA5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHA5_9EUKA)

HSP 1 Score: 104 bits (259), Expect = 7.910e-20
Identity = 115/509 (22.59%), Postives = 214/509 (42.04%), Query Frame = 0
Query:    1 MHYHQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIR----------MLSEEANKPLLDVT---------SYNTIIKGFARLGRVSDAFRVVRAMKSA--QCSPNHITRNTLLSTCVEAGEFDRAWGLI------------DDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAIT---------------SLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISA-LFRRNESDRARDL------FQSFIDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDM-LSRQLPVFPD----------------IHSFNCLMDGWVGISNFEQAEHILRLMQTN-KVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIA----SYMRHGNFEEGWQVYVRMRSQGIPLNEYLV 432
            MH H++ +   ++ +L+K +GR  +I  V+   + + +R +  D    N+ +DA+VR   L + +            L  EA + L D+          S+NT+IKG++R+GR+ DAF VVR ++ A    + N +T +TL+  CV AGE  RA  ++            D  ++  +     T P P S+ +  Q          + +  +A++               + M+  ADA  VDE+L+L   M    ++PSA+T ++L++  L R N    AR        +   + D  + +E   A ++G C   +   ++  A +   + L     V PD                + + N L+           A+ +L+ M+     RP   +  I+M+ Y        A   + ++  +    D + LN ++  C+  G   AA +  +  +    A   +  ++  LI     +     + +   Q++  MR+ GIP +E +V
Sbjct:  167 MHEHEVSITALTFCILIKGYGRVADIPRVRRIYSTMRRRSVAPDLATFNALLDAIVRNIALASGVGGELTFVASSDALLAEAEQVLEDMREQGISPSPRSFNTLIKGYSRVGRMRDAFNVVRRLRIALGAGAANEVTYSTLIHGCVRAGELRRARQILSWMARGSTHITADVYAYTALMRGLLTPPSPQSAHSEVQIRELMWPTPRASKSVVALSMPNIARRALAPSPPFAPMASAADA--VDESLRLLDEMIALGVRPSAVTVSTLVAGCLERANNLTAARAAAGAVRAYAVALGDAPLRIEADAALITGYCWQPKAGTIRSRAHLREALRLFAGACVKPDKREGGAHHIAAQPLLGVRTCNALIAALAVSGELVSAQRVLQAMEAGLSERPNAYTLCIMMRAYGAVQDIEAAYLIWERICEQEW-VDTVGLNTWLATCMLCGKERAAMQAFQTAKIGPQAVRMDTVTFGTLIGGLCDAQSTVASTKRALQLWAEMRAMGIPADEGIV 672          
BLAST of Gcaud8395.t2 vs. uniprot
Match: A0A812QSE7_9DINO (Rf1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812QSE7_9DINO)

HSP 1 Score: 101 bits (251), Expect = 6.830e-19
Identity = 87/386 (22.54%), Postives = 163/386 (42.23%), Query Frame = 0
Query:   12 SYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLSEEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKE-------------NNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHME 384
            +Y  L+K+ GR  ++    S +  + +  ++ D++  N  +D  V+  DLG A +++ E     LLD+ +YNT++KG+     +  A  ++  M +A   PN ++ N +L+T V  G F+ AW  I       VP    T      S   +     K     +  L     S +   +D   ++  L+ + R KE             +N++PS  TY S+I A                    +L   E C  Y + +   R  +         ND++            + C++D  V     ++A   ++L + + ++P     +IL+KG+++ GQ   A   +  + RR +R +  A NAF+    R G++     +++ M+
Sbjct:  112 NYMSLIKAAGRDRDVDRAFSIIQRLRENNVKPDAIAFNCVLDVCVKAGDLGRARKLVQEMKELGLLDIITYNTLLKGYCTKSDLKGAKELLSEMAAAGFEPNDVSYNCILNTAVNNGSFEEAWDTIAKMEQMNVPPDHYTV-----SIMLKALKRAKGQKDVNRCLNFLDRSHIDPCSDEILMNTVLETYIRHKEFRRLESLLAKFEQSNLRPSVPTYGSIIKAYA------------------NLKCPEKCWHYWNEMQGQRGLEP--------NDIV------------YGCMLDALVCNGQVDEA---VQLFEKSNLKPNAVLCSILVKGFTNTGQSQRAMDLWHDMRRRGVRMNTAACNAFVDAQARVGNMEDVLEIVKAMD 451          
BLAST of Gcaud8395.t2 vs. uniprot
Match: A0A1Q9CYW1_SYMMI (Pentatricopeptide repeat-containing protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CYW1_SYMMI)

HSP 1 Score: 99.8 bits (247), Expect = 2.820e-18
Identity = 87/387 (22.48%), Postives = 161/387 (41.60%), Query Frame = 0
Query:   12 SYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLSEEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKE-------------NNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQ 385
            +Y  L+K+ GR  ++    S +  + +  ++ D++  N  +D  V+  DL  A +++ E     LLD+ +YNT++KG+     +  A  ++  M  A   PN ++ N +L+T V  G F+ AW  I       VP    T      S   +     K     S  L     S +   +D   ++  L+ + R KE             +N++PS  TY S+I A                    +L   E C  Y + +   R  +         ND++            + C++D  V     ++A   ++L + + ++P     +IL+KG++  GQ   A   +  + R+ +R +  A NAF+    R G++     +++ M+Q
Sbjct:  435 NYMSLIKAAGRDRDVDRAFSIIQRLRENNVKPDAIAFNCVLDVCVKAGDLVRARKLVQEMKELELLDIITYNTLLKGYCTKSDLKGAKELLSEMSEAGFQPNDVSYNCILNTAVNNGSFEEAWDTIAKMEQMNVPPDHYTV-----SIMLKALKRAKGQKDVSRCLNFLDRSHIDPCSDEILMNTVLETYIRHKEFRRLETLLHKFEQSNLRPSVPTYGSIIKAYA------------------NLKCPEKCWHYWNEMQGQRGLEP--------NDIV------------YGCMLDALVCNGQVDEA---VQLFEKSNLKPNAVLCSILVKGFTTTGQSKRAMDLWHDMRRKGVRMNTAACNAFVDAQARIGNMEDVLEIVQAMDQ 775          
BLAST of Gcaud8395.t2 vs. uniprot
Match: A0A0G4ESE7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESE7_VITBC)

HSP 1 Score: 93.6 bits (231), Expect = 2.500e-16
Identity = 81/388 (20.88%), Postives = 157/388 (40.46%), Query Frame = 0
Query:   38 QRELRMDSVLLNSAVDALVRCNDLGTAIRMLSEEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLE-VCNAYMSGLCNSRQ----EQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFEEGWQVYVRM 420
            Q+ +  D+ +L   ++    CND        +      L  + SY T+I+ +++      A +V+R M       + +  N++LSTCV AG+   A  L+++ S  +                            + +   ++   L  G A  G  D AL+     +   +QP+ I+Y ++I A  R    D A  L     +  + + +  C+  + GL N  Q    E ++  A   L  +   +     ++ SF CLM+  + + +  +   + R +Q  KV+ +  +Y  +MK    AG+       +  L    L P  I     +  C+ +GD+    R ++  E+ K + + N   Y+ ++  + R    +E  + Y +M
Sbjct:  247 QQNVEPDAPMLRCLINFAFECNDPVKVEVFFAALKKHELPSMKSYTTLIRAYSKKNDAWAALKVLREMLDCGVETDSLVLNSVLSTCVGAGQLQIAETLVNE-SVQMC-----------------------EEGQTLLADIVSFNILSKGYAQKGDFDGALKTLRASERAGLQPNDISYNTVIDAAVRSKRLDEAWGLVLEMGEKGIEADKYTCSILIKGLHNIGQGPAREAHLNTALEYLKRLGVSESSRLHEVVSF-CLMESCLHMKDLSRTLEVFRHIQQQKVKVSVVTYGNVMKALGQAGRLRECFELWEGLKHTDLEPTAILYGILLDACINNGDL---PRAMQVFEEAKSSDAVNTVMYTTILKGFARTKQVDEAMRFYHQM 606          
BLAST of Gcaud8395.t2 vs. uniprot
Match: A0A7S2SBE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBE2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 3.170e-16
Identity = 72/245 (29.39%), Postives = 110/245 (44.90%), Query Frame = 0
Query:   12 SYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLS---EEANK----------PLLDVT-SYNTIIKGFARLGRVSDAFRVVRAMKS------AQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLF 236
            +Y +L+K +GR  +  AV   LA++ +  +++D + LN+A+DA VRC +LG A  +L     EA +           L  V+ S+NT+IKG  + G +  A  ++  M+       AQC PN +T N+LL   V A     A  L+  +  DLV                                    TSL++ LA AG++  A  +  RM+ N I P+ ITY ++IS          AR  F
Sbjct:   77 TYCILIKGYGRLGSDQAVDHLLADMRKHGVKLDVITLNAAMDAYVRCGNLGKATSLLDAMKREARRLHAQGKALQGSLAPVSRSFNTLIKGLGQAGHLEGALGLLDEMRDLAYATQAQCLPNDVTLNSLLDAHVRAKNVSGAL-LLMREYEDLVSIEG-------------------------------YTSLITALASAGQLGSAQTMLRRMERNGITPNRITYTAIISGCISTGNLQEARRFF 289          
The following BLAST results are available for this feature:
BLAST of Gcaud8395.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXV2_9FLOR2.130e-18853.95Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A5J4Z316_PORPP1.530e-5227.99Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A835YV31_9STRA1.680e-2824.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1ESQ2_9RHOD4.210e-2821.90Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S4EIM6_9STRA1.240e-2424.17Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A7S0LHA5_9EUKA7.910e-2022.59Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A812QSE7_9DINO6.830e-1922.54Rf1 protein n=1 Tax=Symbiodinium natans TaxID=8784... [more]
A0A1Q9CYW1_SYMMI2.820e-1822.48Pentatricopeptide repeat-containing protein n=4 Ta... [more]
A0A0G4ESE7_VITBC2.500e-1620.88Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2SBE2_9STRA3.170e-1629.39Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 477..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..172
NoneNo IPR availablePANTHERPTHR47932:SF44ATPASE EXPRESSION PROTEIN 3coord: 77..429
coord: 11..237
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 77..429
coord: 11..237
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 214..243
e-value: 0.0011
score: 16.9
coord: 396..428
e-value: 7.5E-8
score: 30.1
coord: 81..113
e-value: 2.1E-8
score: 31.8
coord: 289..321
e-value: 1.4E-4
score: 19.8
coord: 324..356
e-value: 9.8E-6
score: 23.4
coord: 181..212
e-value: 5.3E-8
score: 30.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 285..332
e-value: 1.9E-8
score: 34.4
coord: 179..224
e-value: 5.3E-11
score: 42.6
coord: 78..124
e-value: 3.0E-11
score: 43.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..427
score: 11.388848
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..355
score: 10.347525
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 177..211
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 78..112
score: 12.33152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 286..320
score: 9.591195
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 245..348
e-value: 8.8E-18
score: 66.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 349..451
e-value: 2.0E-11
score: 45.7
coord: 163..241
e-value: 1.3E-14
score: 56.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..147
e-value: 2.2E-24
score: 88.4
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 344..430
e-value: 2.7E-8
score: 33.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1597_length_9575_cov_4.430620contigNODE_1597_length_9575_cov_4.430620:1138..2709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8395.t2Gcaud8395.t2Gracilaria caudata M_176_S67 malemRNANODE_1597_length_9575_cov_4.430620 1138..2709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8395.t2 ID=Gcaud8395.t2|Name=Gcaud8395.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=524bp
MHYHQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNS
AVDALVRCNDLGTAIRMLSEEANKPLLDVTSYNTIIKGFARLGRVSDAFR
VVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSP
TAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQL
FTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLEVC
NAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGI
SNFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMR
RSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPL
IASYMRHGNFEEGWQVYVRMRSQGIPLNEYLVKYMTVQLSQSNRKAGPHQ
VQNCAQLLKDGLTDGINLKLLRKCRKKMLLELKNKRSQEALNKLADEPEF
RPASEQIFDRHGWNRIDSGWRVF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long