Gcaud8395.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8395.t1
Unique NameGcaud8395.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length561
Homology
BLAST of Gcaud8395.t1 vs. uniprot
Match: A0A2V3IXV2_9FLOR (Pentatricopeptide repeat-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXV2_9FLOR)

HSP 1 Score: 604 bits (1558), Expect = 6.590e-208
Identity = 313/569 (55.01%), Postives = 402/569 (70.65%), Query Frame = 0
Query:    1 MWQVGNAVTPDEKLIVSLANTAVNRSSYRVSLKLFHLMHYHQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLSEEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLID---------DDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLMQTNKV-RPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFEEGWQVYVRMRSQGIPLNEYLVKYMTVQLSQSNRKAGPHQVQNCAQLLKDGLTDGINLKLLRKCRKKMLLELKNKRSQEALNKLADEPEFRPASEQIFDRHGWNRIDSGWRV 559
            MW VGNAVTPDEKLIV+LAN AV+  +Y++ LKLF LM  H  +MGPFSYSVLLKSHGRA N+VAV S LAEI      +DS+L NSAVDALVRCN++G A+R+L+E+  +PLLDV SYNTIIKGFA  G V+DAFRV+  M +  C+PN +TRNTLL  CV+AG+ DRA  LID           +  L+P   P      SS+    + +    +SSS QL I +TSLM+GLAD+G++DEA++L   M+E ++ PS+ITYA+LIS+  R     +AR LF SF++D+L+SL VCNAY+SGLC S Q + V  AAA L+ MLS  + V PD+  FN L+DG V I +F +AE I+ +M +N+  RP   SYTI+MKGY D  QY  AK  FR++ RR  RPDR+ALNAFI +C+RSGD  AA RV+EHME +KGA  P  QSYSP+I SYMR  N+++ W+VY RMRSQGIPLNE+ ++ +T+Q         P   + CA+LLK GL DG+N+K+LRKCR+ ML +L N+RS+  L+ LA+EPEF   SEQIF RHGWN I+SGWR 
Sbjct:  140 MWLVGNAVTPDEKLIVNLANAAVHHRAYQICLKLFRLMRAHGTQMGPFSYSVLLKSHGRAGNVVAVNSVLAEIQLHHTPVDSILFNSAVDALVRCNNMGAALRLLAEDEYRPLLDVASYNTIIKGFAGRGLVADAFRVLDRMNANHCTPNDVTRNTLLLACVQAGDLDRAKSLIDATDSNGGLYQQNNPLLPQQQPQHLSTASSTAKHTKPSPHQISSSSKQLRIGLTSLMAGLADSGQLDEAMRLMDHMRELHLPPSSITYAALISSCIRCKAFAQARSLFHSFVEDELVSLPVCNAYISGLCRSGQTEQVMQAAATLDAMLSGNVCVAPDVDCFNSLLDGLVRIRDFAKAEEIMEIMHSNRTFRPNIVSYTIMMKGYGDTRQYRKAKGIFREMWRRRQRPDRVALNAFIKICIRSGDRNAAIRVLEHMELKKGAVCPGIQSYSPIITSYMREDNYDKSWEVYKRMRSQGIPLNEHFIQLLTMQFFDREGHKKPKLTERCAELLKHGLNDGVNVKVLRKCRRLMLTKLPNQRSRNLLDHLANEPEFHSVSEQIFARHGWNEINSGWRA 708          
BLAST of Gcaud8395.t1 vs. uniprot
Match: A0A5J4Z316_PORPP (Pentatricopeptide repeat-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z316_PORPP)

HSP 1 Score: 209 bits (533), Expect = 2.380e-55
Identity = 157/567 (27.69%), Postives = 267/567 (47.09%), Query Frame = 0
Query:    7 AVTPDEKLIVSLANTAVNRSSYRVSLKLFHLMHYHQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLS----EEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGL------IDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSF--IDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFEEGWQVYVRMRSQGIPLNEYLVK-YMTVQLSQSNRKAGPHQVQNCAQLLKDGLTDGINLKLLRKCRKKMLLELKNKRSQEALNKLADEPEFRPASEQIFDRHGWNRIDSGWRVF 560
            A  PDEK+    A+ A  + +  ++  +   M  H ++ GP++Y+ L+K++GR+ N V V+  L  +H + ++ D V LN+A+DALVRC  +  A ++LS    E + +P  +V SYNT++KG A LG V +AF + + M      P+ +TRNTLL  CV    + RA  L      ID +  D +                                 IA  ++++GLA  GR  EA+++    +    +PSA T+ S+I+A     +  RA   F+    +  D +S     A + GL  + Q+ +++ A+ +L +M+ R+ P       FN LM+G+  + +    E                           A    G KR+F  L       D  +LNAF+   VR  +I  AERV++ ME+  G+  P+  +YS LI +Y+   + +  W VY R++S GI  N+ L++  + + + Q   +           + +D     +   ++++ ++K+ L  K+  S      +  +     AS++IF+RH WN I SG+R F
Sbjct:  286 ACEPDEKMCCLAADLAAEQRNVGLARDIISEMESHGVKAGPYAYAALIKAYGRSGNDVGVERTLQRMHTQRVQPDQVALNAAIDALVRCKKVKRAQKLLSSMPAEWSVQP--NVRSYNTVMKGLAELGLVDEAFALRKEMLDLGLEPSKVTRNTLLLACVNGNAWVRAQKLVFAIKSIDGNDIDDL---------------------------------IAYNTVINGLAQVGRFSEAIEVMNEFEAKGGRPSAETHTSIITAALAEEDMGRAWFFFRGMKRLGVDPLSTTY-RAMIRGLTLTGQQSSLRDASELLLEMV-RKFPTETGAIEFNTLMNGFAQVGDMNAVERXXXXXXXXXXXXXXXXXXXXXXXXXXARNLSGVKRSFAALRASRGPVDLTSLNAFVSALVRCDEIDLAERVVDEMERVGGSIRPDLITYSVLIHAYLSAADAKRAWPVYERLKSSGIKPNQRLLEDILRLSIGQRATRGSLLGASQLRVVFRDMDIAHVPTWVIKRWQRKLQLGAKSLGSDMPYQSVKSKKP--KASKEIFERHEWNEIQSGFRAF 813          
BLAST of Gcaud8395.t1 vs. uniprot
Match: A0A7S1ESQ2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESQ2_9RHOD)

HSP 1 Score: 142 bits (359), Expect = 3.220e-32
Identity = 128/571 (22.42%), Postives = 221/571 (38.70%), Query Frame = 0
Query:    1 MWQVGNA----VTPDEKLIVSLANTAVNRSSYRVSLKLFHLMHYHQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLS----EEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILR-LMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFEEGWQVYVRMRSQGIPLNEYLVKYMTVQLSQSNRKAGPHQVQNCAQL---LKDGLTDGINLKLLRKCRKKMLLELKNKRSQEALNKLADEPEFRPASEQIFDRHGWNRIDSGWRV 559
            MW+  N     V PDEK+  S AN A       +  ++   M  + +     SYSV+LK++GRA N   ++  L  +  + ++ D ++ N+A+DAL+RCND   A  +LS    E   KP  +  SYNTI+KG A +  + +AF +   M++   +                                                                                                                                                GLC+S+Q   +  A  V ++M  R+ P   D+HS+N L+ G+V + N +  E++++ +M  +++ P   +YT L+ GY  A      +R FR++    +  DR ALNAFI   VR  D+  A R+   M+   G+ +P+  +Y+ LI   +  G  EE W +Y  M+   I ++  L+  + V     NR     +V    Q+   L+D    G   + + + R++     +  + + + + +      + A+++IF++HGWN  DSG+R 
Sbjct:  299 MWRRRNENRKNVAPDEKMCASAANAASEMRQLALVKRILGEMESNGVSASAISYSVMLKAYGRAGNASGIQKTLDRMQAKSVKPDVIVFNTAIDALIRCNDFVCAREILSGMYSEWGFKP--NERSYNTILKGLAEMALLDEAFALRDEMETVGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLCSSQQSAQLNAAHTVFDEM-RRRFPDEIDVHSYNTLISGYVEMENMQAVEYLVKQMMIKHQLAPDVVTYTALLTGYGRARNLISTRRVFREMRASKVAVDRYALNAFIAAAVRCSDLDLAVRMYNEMKTAGGSLAPDMYTYAALICGLLHGGRPEEAWMLYESMKQSSIVMSTRLI--IDVARISLNRDVPRSKVLTADQIHIVLRDMERSGAPRRTVERWRREWRTIFQTPQQRTSYSPVNR----KSAAQRIFEQHGWNPFDSGFRA 832          
BLAST of Gcaud8395.t1 vs. uniprot
Match: A0A835YV31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV31_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.450e-28
Identity = 117/488 (23.98%), Postives = 204/488 (41.80%), Query Frame = 0
Query:   11 DEKLIVSLANTAVNRSSYRVSLKLFHLMHYHQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLSE-------------EANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGP-----------------GSSSTPQQRNNTKHHA--------SSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFI-----DDDLISLEVC-NAYMSGLCN--------------------SRQEQNVQVAAAVLNDMLSRQLPVFPDIH---------SFNCLMDGWVGIS--NFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLR-PDRIALNAFIMVCVRSGDIIAAERVIEHMEQ 422
            DE+L   + +         ++  +   MH   +  G  ++ +L+K +GR      V +AL  + +  +  D V LN+AVDA VRC +L  A +++               ++     +  +YNT+IKG  + GR+ +AF  + AM  + C  + +T N+L+  CV  G+ DRA+ L+   SF +V   S                       GS  +                     ++    A T+++SG ADAG +  AL +   M+ + +  + +TY +L+ A  +      AR LF+        D  L    +  N  + GLC                      R ++++      L   +   L +  D+          + N ++DG V ++     +AE I +LM    + P + +Y+I++KGY   G    A+  F  L+R     PD +ALN+++  CVR GD+ AA   ++   Q
Sbjct:   96 DEQLCSVVLDLCAETGRMTLAETIVDAMHDRGVPAGNVTHCILVKGYGRQRRAHRVDAALRGMRRARVAPDVVTLNAAVDAYVRCGELRRAEQVVRAMEASVLSSSGGGGDSGAVAPNTRTYNTLIKGLGKAGRLDEAFATLEAMAVSGCEADSVTANSLIDACVRCGQLDRAYALLLR-SFSVVSGGSXXXXXXIDXXXXXXXXXXXXASRGSIGSXXXXXXXXXXXXXXXXXXXGGAVPSVHAFTAVLSGFADAGDMARALTVLELMERSGVTANLVTYTALLGACVKAGALPEARRLFEGLRAKGQRDPALRPNTITYNTLIVGLCRLAEREEADMRQEWGGEGGVQDRADRDIMAPVCALPSGIQEALKLLLDMKHNGVAASETTINSILDGVVSLTPPRMAEAEAIRQLMTQLGLIPNSVTYSIMIKGYGRVGNLEAARAAFGALLRDPRACPDVVALNSYLDACVRCGDLPAALSTLDAAAQ 582          
BLAST of Gcaud8395.t1 vs. uniprot
Match: A0A7S2XRU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRU4_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.310e-25
Identity = 144/618 (23.30%), Postives = 263/618 (42.56%), Query Frame = 0
Query:   11 DEKLIVSLANTAVNRSSYRVSLKLFHLMHY--HQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLSEEANKPLLDVTS--------------------YNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLEVC-NAYMSGLCNSRQEQ--------NVQVAAAVLNDMLSRQLP---------VFPDIHSFNCLMD--GWVGISNFEQAEHILRLMQTNKVRPTTASY--TILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIE-------HMEQRKG--ATSPNAQSYSPLIASYMRHGN---FEEGWQVYVRMRSQGIP----LNEYLVKYMTVQLSQSNRKAGPHQVQNC-AQLLKDGLTDGINLKLLR---KCRKKMLLELKNKRSQEALNKLADEPEFRPASE----QIFDRHGWNRIDSGWRVF 560
            DE+    + N+ VN     ++ K+  L     H   + P +YS+L+K +GR+++I  VK  L++     +  D+++LNS +DA V C+ +  A R+ +        D+ +                    YN I+KG A++G ++ A ++   M+ A    + IT NTL++  V A +FD A  ++ + +    P  S +  G             K H +       A T L+ G   AG  D+A+ +   M+E  ++P+ IT+   I AL R     +A+ +F+      + +  V  N +++GL      +        N +   A  N  +S  L          V P+  + + L+D  G        +A+ +++ +   ++ P T     T L+K     G   GA  +F+ +      PD IALNAF+  C R G++  A    +       H   + G     P+  +YS L+++ +        +    +Y  M+ QGI     L + ++K M +         GP  + +   Q   + L D   L       + R + +  +   R  E   + AD+     +++    Q+F + GWN++DSG+R++
Sbjct:  126 DERDFSMVLNSFVNDGKMDMAHKVVALQERTEHAPPLSPVAYSILIKGYGRSHDIENVKMILSQADSNGVIADTIMLNSVIDAYVNCDCVDEATRIFNSVRYSQTKDLAATGSSKTATSSQPSAQLNRRTYNIILKGLAKVGDLTQALKLSNEMRRAGLWDD-ITTNTLVNAAVTASKFDIASKILRNCTSFYQPNESKSRMG--------NYRRGKEHPNIE-----AYTELLDGYGKAGMTDKAIGVLKLMQERGVEPNEITFTCAIGALARDKRISQAKKMFEYMEKTGVRATAVTYNTFIAGLVAEPPTEDDKDGISDNGEAMYAQYNKFVSEALNLTGKMIARGVMPNAITISVLVDAMGRCNPPRMAEAQLLVKDLDKKEILPLTNQRVATSLIKICGRCGDIQGASESFQMIQ----NPDVIALNAFLDACCRVGNLKLAFDTFKQYAAKGTHRSTKLGNRQIEPDVITYSVLLSALLSLNTNTAAKRARVLYRDMKRQGISADIGLVDVILKAMII--------GGPMGIDDSDLQFTIEVLRDAKKLDWEAGQFETRNRAVRGVLVGRMSEVWKENADDYGMGFSNDNEEDQLFKKKGWNKVDSGFRLW 717          
BLAST of Gcaud8395.t1 vs. uniprot
Match: A0A7S4EIM6_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EIM6_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.830e-24
Identity = 146/604 (24.17%), Postives = 251/604 (41.56%), Query Frame = 0
Query:   41 HQIEMGPFSYSVLLKSHGR---ANNI-VAVKSALA-EIHQRELRMDSVLLNSAVDALVRCNDL------------------GTAIRMLSEE---ANK-----------PLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPN-------HITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLE----VCNAYMSGLCNSRQ-----------EQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHIL--------RLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSG-DIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFE---EGWQVYVRMRSQGIPL-NEYLVKYMTVQLSQSNRKAGPH--QVQNCAQLLKDGLTDGINLKLLRKCRKKMLLELKNKRSQEALNKLADEPEF-----------RPASEQIFDRHGWNRIDSGWRV 559
            H   + P +YS+L+K +G+   + NI V ++ A A E  Q  ++ D++  NS +DA + C  L                  GT  R  S++   ++K           P  ++ SYN ++KG+AR G + DA  +   M+S     +       H+T NTL+   V A EF  A  ++D  +                        NTK   +S      A T+LM G A  G++ +A+ L   MKE  ++P+                   A  +         I+ +    + NAY+SGL    +           +  V  A  +L +M+  +  + PD ++   ++DG+         E +         R++ TN +R TTA    L++          A   FR++     RPD  A+NA I   VRSG + +A E    +         PN  S+S LI ++++ G F+      ++Y  MR Q   L ++ LV  +   +  ++R  G      +  A +L+D   + ++ +  +  R+KML+E  +  +    N   +E E            +     +F+RHGWN++DSG+R+
Sbjct:  400 HAPALSPVTYSILVKGYGKLCDSENIDVLLRHASATEEGQSIMKPDTIFFNSLMDAYINCRQLHKAQTILMFMIVNDKFINGTIDREFSDKDLSSSKNDFFTFPSRVCPSPNLRSYNILLKGYAREGLLEDALNLAEEMRSIGSRTSNPGQWWDHVTTNTLVQAAVAAKEFAIAQEILDQYTL--------------------SERNTKKSRNSDHPNADAYTTLMDGFAKDGKLKQAISLLKTMKEREVEPNEYHXXXXXXXXXXXXXXXXAEKMLVHVKTKGSIARKQLRVIYNAYISGLVQGNERNSVISGDDDHDNKVNNALTILREMIEER--IMPDANTIAIILDGFGHCLKPRMKEAMTLVEKLETQRIIPTNHIRVTTA----LVRVCGSCHSLDRAIICFRRIP----RPDVAAINALIDAAVRSGNEKVAVETFNRYFAGDIPRAVPNVISFSILIGAHIKKGTFDGSRAARELYQCMRFQRRILPDKGLVDIIAKGMVDTSRTCGVQASDARFVAGVLRDA--EKLDWEEGQLDRRKMLVE--SAMNNHVANAWEEEAELYGLWKKDGSRRKSDDNSMFERHGWNKVDSGFRL 969          
BLAST of Gcaud8395.t1 vs. uniprot
Match: A0A7S0LHA5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHA5_9EUKA)

HSP 1 Score: 104 bits (259), Expect = 1.050e-19
Identity = 115/509 (22.59%), Postives = 214/509 (42.04%), Query Frame = 0
Query:   38 MHYHQIEMGPFSYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIR----------MLSEEANKPLLDVT---------SYNTIIKGFARLGRVSDAFRVVRAMKSA--QCSPNHITRNTLLSTCVEAGEFDRAWGLI------------DDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAIT---------------SLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISA-LFRRNESDRARDL------FQSFIDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDM-LSRQLPVFPD----------------IHSFNCLMDGWVGISNFEQAEHILRLMQTN-KVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIA----SYMRHGNFEEGWQVYVRMRSQGIPLNEYLV 469
            MH H++ +   ++ +L+K +GR  +I  V+   + + +R +  D    N+ +DA+VR   L + +            L  EA + L D+          S+NT+IKG++R+GR+ DAF VVR ++ A    + N +T +TL+  CV AGE  RA  ++            D  ++  +     T P P S+ +  Q          + +  +A++               + M+  ADA  VDE+L+L   M    ++PSA+T ++L++  L R N    AR        +   + D  + +E   A ++G C   +   ++  A +   + L     V PD                + + N L+           A+ +L+ M+     RP   +  I+M+ Y        A   + ++  +    D + LN ++  C+  G   AA +  +  +    A   +  ++  LI     +     + +   Q++  MR+ GIP +E +V
Sbjct:  167 MHEHEVSITALTFCILIKGYGRVADIPRVRRIYSTMRRRSVAPDLATFNALLDAIVRNIALASGVGGELTFVASSDALLAEAEQVLEDMREQGISPSPRSFNTLIKGYSRVGRMRDAFNVVRRLRIALGAGAANEVTYSTLIHGCVRAGELRRARQILSWMARGSTHITADVYAYTALMRGLLTPPSPQSAHSEVQIRELMWPTPRASKSVVALSMPNIARRALAPSPPFAPMASAADA--VDESLRLLDEMIALGVRPSAVTVSTLVAGCLERANNLTAARAAAGAVRAYAVALGDAPLRIEADAALITGYCWQPKAGTIRSRAHLREALRLFAGACVKPDKREGGAHHIAAQPLLGVRTCNALIAALAVSGELVSAQRVLQAMEAGLSERPNAYTLCIMMRAYGAVQDIEAAYLIWERICEQEW-VDTVGLNTWLATCMLCGKERAAMQAFQTAKIGPQAVRMDTVTFGTLIGGLCDAQSTVASTKRALQLWAEMRAMGIPADEGIV 672          
BLAST of Gcaud8395.t1 vs. uniprot
Match: A0A812QSE7_9DINO (Rf1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812QSE7_9DINO)

HSP 1 Score: 101 bits (251), Expect = 8.840e-19
Identity = 87/386 (22.54%), Postives = 163/386 (42.23%), Query Frame = 0
Query:   49 SYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLSEEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKE-------------NNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHME 421
            +Y  L+K+ GR  ++    S +  + +  ++ D++  N  +D  V+  DLG A +++ E     LLD+ +YNT++KG+     +  A  ++  M +A   PN ++ N +L+T V  G F+ AW  I       VP    T      S   +     K     +  L     S +   +D   ++  L+ + R KE             +N++PS  TY S+I A                    +L   E C  Y + +   R  +         ND++            + C++D  V     ++A   ++L + + ++P     +IL+KG+++ GQ   A   +  + RR +R +  A NAF+    R G++     +++ M+
Sbjct:  112 NYMSLIKAAGRDRDVDRAFSIIQRLRENNVKPDAIAFNCVLDVCVKAGDLGRARKLVQEMKELGLLDIITYNTLLKGYCTKSDLKGAKELLSEMAAAGFEPNDVSYNCILNTAVNNGSFEEAWDTIAKMEQMNVPPDHYTV-----SIMLKALKRAKGQKDVNRCLNFLDRSHIDPCSDEILMNTVLETYIRHKEFRRLESLLAKFEQSNLRPSVPTYGSIIKAYA------------------NLKCPEKCWHYWNEMQGQRGLEP--------NDIV------------YGCMLDALVCNGQVDEA---VQLFEKSNLKPNAVLCSILVKGFTNTGQSQRAMDLWHDMRRRGVRMNTAACNAFVDAQARVGNMEDVLEIVKAMD 451          
BLAST of Gcaud8395.t1 vs. uniprot
Match: A0A1Q9CYW1_SYMMI (Pentatricopeptide repeat-containing protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CYW1_SYMMI)

HSP 1 Score: 99.8 bits (247), Expect = 3.700e-18
Identity = 87/387 (22.48%), Postives = 161/387 (41.60%), Query Frame = 0
Query:   49 SYSVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGTAIRMLSEEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKE-------------NNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLEVCNAYMSGLCNSRQEQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQ 422
            +Y  L+K+ GR  ++    S +  + +  ++ D++  N  +D  V+  DL  A +++ E     LLD+ +YNT++KG+     +  A  ++  M  A   PN ++ N +L+T V  G F+ AW  I       VP    T      S   +     K     S  L     S +   +D   ++  L+ + R KE             +N++PS  TY S+I A                    +L   E C  Y + +   R  +         ND++            + C++D  V     ++A   ++L + + ++P     +IL+KG++  GQ   A   +  + R+ +R +  A NAF+    R G++     +++ M+Q
Sbjct:  435 NYMSLIKAAGRDRDVDRAFSIIQRLRENNVKPDAIAFNCVLDVCVKAGDLVRARKLVQEMKELELLDIITYNTLLKGYCTKSDLKGAKELLSEMSEAGFQPNDVSYNCILNTAVNNGSFEEAWDTIAKMEQMNVPPDHYTV-----SIMLKALKRAKGQKDVSRCLNFLDRSHIDPCSDEILMNTVLETYIRHKEFRRLETLLHKFEQSNLRPSVPTYGSIIKAYA------------------NLKCPEKCWHYWNEMQGQRGLEP--------NDIV------------YGCMLDALVCNGQVDEA---VQLFEKSNLKPNAVLCSILVKGFTTTGQSKRAMDLWHDMRRKGVRMNTAACNAFVDAQARIGNMEDVLEIVQAMDQ 775          
BLAST of Gcaud8395.t1 vs. uniprot
Match: A0A0G4ESE7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESE7_VITBC)

HSP 1 Score: 93.6 bits (231), Expect = 3.160e-16
Identity = 81/388 (20.88%), Postives = 157/388 (40.46%), Query Frame = 0
Query:   75 QRELRMDSVLLNSAVDALVRCNDLGTAIRMLSEEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPNHITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQRNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSAITYASLISALFRRNESDRARDLFQSFIDDDLISLE-VCNAYMSGLCNSRQ----EQNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLMQTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAFIMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFEEGWQVYVRM 457
            Q+ +  D+ +L   ++    CND        +      L  + SY T+I+ +++      A +V+R M       + +  N++LSTCV AG+   A  L+++ S  +                            + +   ++   L  G A  G  D AL+     +   +QP+ I+Y ++I A  R    D A  L     +  + + +  C+  + GL N  Q    E ++  A   L  +   +     ++ SF CLM+  + + +  +   + R +Q  KV+ +  +Y  +MK    AG+       +  L    L P  I     +  C+ +GD+    R ++  E+ K + + N   Y+ ++  + R    +E  + Y +M
Sbjct:  247 QQNVEPDAPMLRCLINFAFECNDPVKVEVFFAALKKHELPSMKSYTTLIRAYSKKNDAWAALKVLREMLDCGVETDSLVLNSVLSTCVGAGQLQIAETLVNE-SVQMC-----------------------EEGQTLLADIVSFNILSKGYAQKGDFDGALKTLRASERAGLQPNDISYNTVIDAAVRSKRLDEAWGLVLEMGEKGIEADKYTCSILIKGLHNIGQGPAREAHLNTALEYLKRLGVSESSRLHEVVSF-CLMESCLHMKDLSRTLEVFRHIQQQKVKVSVVTYGNVMKALGQAGRLRECFELWEGLKHTDLEPTAILYGILLDACINNGDL---PRAMQVFEEAKSSDAVNTVMYTTILKGFARTKQVDEAMRFYHQM 606          
The following BLAST results are available for this feature:
BLAST of Gcaud8395.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXV2_9FLOR6.590e-20855.01Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A5J4Z316_PORPP2.380e-5527.69Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A7S1ESQ2_9RHOD3.220e-3222.42Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A835YV31_9STRA1.450e-2823.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XRU4_9STRA3.310e-2523.30Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S4EIM6_9STRA1.830e-2424.17Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A7S0LHA5_9EUKA1.050e-1922.59Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A812QSE7_9DINO8.840e-1922.54Rf1 protein n=1 Tax=Symbiodinium natans TaxID=8784... [more]
A0A1Q9CYW1_SYMMI3.700e-1822.48Pentatricopeptide repeat-containing protein n=4 Ta... [more]
A0A0G4ESE7_VITBC3.160e-1620.88Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 514..534
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..209
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 286..480
coord: 8..401
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 118..150
e-value: 2.3E-8
score: 31.7
coord: 218..249
e-value: 5.8E-8
score: 30.4
coord: 251..280
e-value: 0.0012
score: 16.8
coord: 326..358
e-value: 1.5E-4
score: 19.7
coord: 433..465
e-value: 8.1E-8
score: 30.0
coord: 361..393
e-value: 1.1E-5
score: 23.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 322..369
e-value: 2.1E-8
score: 34.2
coord: 115..161
e-value: 3.3E-11
score: 43.2
coord: 216..261
e-value: 5.8E-11
score: 42.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 9.591195
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 115..149
score: 12.33152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 214..248
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 430..464
score: 11.388848
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..392
score: 10.347525
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 281..518
e-value: 4.1E-34
score: 120.4
coord: 17..182
e-value: 5.1E-27
score: 97.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 200..278
e-value: 1.5E-14
score: 56.0
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 381..467
e-value: 2.7E-8
score: 33.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1597_length_9575_cov_4.430620contigNODE_1597_length_9575_cov_4.430620:1138..2820 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8395.t1Gcaud8395.t1Gracilaria caudata M_176_S67 malemRNANODE_1597_length_9575_cov_4.430620 1138..2820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8395.t1 ID=Gcaud8395.t1|Name=Gcaud8395.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=561bp
MWQVGNAVTPDEKLIVSLANTAVNRSSYRVSLKLFHLMHYHQIEMGPFSY
SVLLKSHGRANNIVAVKSALAEIHQRELRMDSVLLNSAVDALVRCNDLGT
AIRMLSEEANKPLLDVTSYNTIIKGFARLGRVSDAFRVVRAMKSAQCSPN
HITRNTLLSTCVEAGEFDRAWGLIDDDSFDLVPTSSPTAPGPGSSSTPQQ
RNNTKHHASSSMQLTIAITSLMSGLADAGRVDEALQLFTRMKENNIQPSA
ITYASLISALFRRNESDRARDLFQSFIDDDLISLEVCNAYMSGLCNSRQE
QNVQVAAAVLNDMLSRQLPVFPDIHSFNCLMDGWVGISNFEQAEHILRLM
QTNKVRPTTASYTILMKGYSDAGQYGGAKRTFRKLMRRSLRPDRIALNAF
IMVCVRSGDIIAAERVIEHMEQRKGATSPNAQSYSPLIASYMRHGNFEEG
WQVYVRMRSQGIPLNEYLVKYMTVQLSQSNRKAGPHQVQNCAQLLKDGLT
DGINLKLLRKCRKKMLLELKNKRSQEALNKLADEPEFRPASEQIFDRHGW
NRIDSGWRVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long