Gcaud8378.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8378.t1
Unique NameGcaud8378.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length434
Homology
BLAST of Gcaud8378.t1 vs. uniprot
Match: A0A2V3INU4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INU4_9FLOR)

HSP 1 Score: 509 bits (1311), Expect = 1.130e-175
Identity = 252/434 (58.06%), Postives = 320/434 (73.73%), Query Frame = 0
Query:    1 MSFEVDLKMDTLFWDELGDHQIQINSCDRQGNSHDVLMEITGKNLDPDDYTPGAAFVIDSEHWEKFCSPVPSLEGIDAGDPILFYRINNSTRSPSA--MRLHMTAIPGSLVTPSVRLSFINAPLRHHTQKRFVFDDNDGHLYSTTSRMLHDVAHISPDDVFQPDFENPDTFSEVVILPGSNITASGFMEGSFNNFRITRLFQLEVGWEQTMKADISSRLIARSSYRATEEREVYRRPIQGAYYSDRFFLFGRFTVNAFSVVDVVQEVQIESGVDAFVRATYENVQAVTASFSSRRMDANSLLPPDLASYGTFDINFDSVIEQYVALNGFFGARPGIIIEARLGGTSMVGKFSATLGLEASVQYRNPPFEPLPYSSSS-RGDCGQCHALQGRAYVKGKDLQYHVHENGVLVKHKVLDSRLFETELTTVCALTQAC 431
            +SF VDLKMD + W+EL D  I++++C R GN+HDV +E+ G+ LDP+DY PG+AFVID+EHWEK C  VP L GID  DP+LF+R+ N T   SA  +RL MTA+PGS V PSV+   +  PL+ HTQKR++F D+   LYS  SRML       P D+        + FSE  I PG+NI+ SG +EG+  N RITRLFQLEV WEQ +KADISSR IA   Y A+ EREV+R+PIQGA  S R   FGR++V A +VV++VQEVQ +SGV+AF+RA++EN++AVTASF+S  M+A SL+PPD  SYGTFDINFD+VI Q++ +NGF+GAR GI+++ARL G S+VG ++ATLGL+AS+Q R PPF P+P+S     G C +CH LQGRA VKGKDLQY++HENGVL KHKVLD  LFE E TTVCA  Q C
Sbjct:   65 VSFSVDLKMDAVLWEELEDDNIEMSTCIRHGNTHDVRIELIGERLDPEDYVPGSAFVIDAEHWEKLCGSVPFLRGIDGQDPVLFFRMTNVTELDSAPKLRLDMTAVPGSFVAPSVQFDVLERPLKQHTQKRYMFHDSP--LYSAASRMLEAPIGSLPGDI---SHSGSEVFSEFAIFPGANISLSGVVEGNIRNVRITRLFQLEVSWEQNVKADISSRFIASRMYSASNEREVHRKPIQGATSSGRIAFFGRYSVTASTVVNIVQEVQADSGVNAFLRASHENIEAVTASFASNEMEAESLVPPDFGSYGTFDINFDNVINQHIGINGFYGARTGIVVDARLAGISLVGTYTATLGLDASMQMRYPPFSPVPHSGGRVLGTCQECHRLQGRASVKGKDLQYYIHENGVLQKHKVLDQSLFEKEFTTVCAFAQVC 493          
BLAST of Gcaud8378.t1 vs. uniprot
Match: A0A2V3IHV2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHV2_9FLOR)

HSP 1 Score: 234 bits (597), Expect = 1.130e-68
Identity = 143/381 (37.53%), Postives = 211/381 (55.38%), Query Frame = 0
Query:    1 MSFEVDLKMDTLFWDELGDHQIQINSCDRQGNSHDVLMEITGKNLDPDDYTPGAAFVIDSEHWEKFCSPVPSLEGIDAGDPILFYRINNSTRSPSAMR--LHMTAIPGSLVTPSVRLSFIN---APLRHHTQKRFVFDDNDGHLYSTTSRMLHDVAHISPDDVFQPDFENPDTFSEVV-------ILPGSNITASGFMEGSFNNFRITRLFQLEVGWEQTMKADISSRLIARSSYRATEEREVYRRPIQGAYYSDRFFLFGRFTVNAFSVVDVVQEVQIESGVDAFVRATYENVQAVTASFSSRRMDANSLLPPDLASYGTFDINFDSVIEQYVALNGFFGARPGIIIEARLGGTSMVGKFSATLGLEASVQYRNPPFEPL 369
            +S  V+LK D + WDE+    I I SC R  +   V ME+TG +LD  DY    AFVI  + W+K C  +  +  +D GD +LF+ I   T+S S+ R  L +  + GS V P V +  +    + L H   +R VF+DN     + TS  L       P D    D     +  + V       I+PG+ I  S  +EGS + FR TRLF+LE  WEQ ++A+I+SR+ A S++RA++ RE+YRR +    +S      G   + +F  +D +QEV ++SG+DA + AT EN+  V A+F S  + A+SLLPP+  S G+  ++F +V  Q + L+GFFG RP + +E  +G     G+  A +GL+A VQ R PPF PL
Sbjct:   64 LSVSVELKKDAILWDEVRADGIMITSCFRNVSEQVVGMELTGAHLDLSDYERDTAFVIQVKDWKKSCGTMELIPRVDPGDDVLFFVIQKVTKSRSSSRVQLELKVVSGSDVAPVVMVEIVGTGKSNLLH--SERLVFEDNPS--INFTSHFL------KPSDSDNEDVSLITSARQTVSQIQQNNIVPGAQIFTSAQLEGSIDRFRFTRLFRLEAEWEQNLRANIASRVTATSTFRASDTREIYRRVLPDFSFSTSIPFLGTVRLISFMKLDFIQEVAMDSGLDAMITATNENILKVNANFGSGVVRADSLLPPNFGSSGSSILDFGNVTSQELGLSGFFGYRPALGLELTVGSEKAEGEAGAKMGLQADVQNRTPPFPPL 434          
BLAST of Gcaud8378.t1 vs. uniprot
Match: A0A2V3IUH9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH9_9FLOR)

HSP 1 Score: 236 bits (602), Expect = 2.530e-68
Identity = 137/409 (33.50%), Postives = 218/409 (53.30%), Query Frame = 0
Query:    1 MSFEVDLKMDTLFWDELGDHQIQINSCDRQGNSHDVLMEITGKNLDPDDYTPGAAFVIDSEHWEKFCSPVPSLEGIDAGDPILFYRINNSTRSPSAMRLHMTAIPGSLVTPSVRLSFINAPLRHHT-QKRFVFDDNDGHLYSTTSRMLHDVAHISPDD----VFQPDFENPDTFSEVVILPGSNITASGFMEGSFNNFRITRLFQLEVGWEQTMKADISSRLIARSSYRATEEREVYRRPIQGAYYSDRFFLFGRFTVNAFSVVDVVQEVQIESGVDAFVRATYENVQAVTASFSSRRMDANSLLPPDLASYGTFDINFDSVIEQYVALNGFFGARPGIIIEARLGGTSMVGKFSATLGLEASVQYRNPPFEPLPYSSSSRGDCGQCHALQGRAYVKGKDLQYHVHENG 404
            + F V+LK D++ +DEL +  I+I SC R   S    +++TG NLD  D+  G AFVID + WEK C  V  +EG+D  D +LFY I+  + +   + L M  + GS V P V +     P+      ++ VF  ND  L+++TS +L    ++  +D    V +P   +    S+V +  G+ +     +  S N F+I R F+ EV WEQ++ A ++++L   + ++     E++RRPI    +S +    GR    AF  +D V EV+I + ++A +RA++E  Q VTA     R+++ +LLP +  S G+ +  F   +    ++ GF G RP I +E  LG   + G   A LGLEA  + ++PPF P        G C +CH LQG   ++GKDL   + +NG
Sbjct:   74 LEFSVELKKDSVVYDELEEDNIRITSCTRDAASRKATVQLTGDNLDSADFGTGVAFVIDVDDWEKHCGQVQPVEGVDEADDVLFYVIDAVSVNGKQVSLSMNIVSGSEVAPEVDIDISEEPVFVSALPQKVVF--NDSPLFASTSSLLATSRNLMINDSLPYVTRPKISHK---SKVNLFKGAVLEVDASLSASVNRFKIKRFFKTEVQWEQSLTASLNAQLTVDAKFKGERGGEIFRRPIPKFGFSAKIPFVGRVRAGAFGKLDWVAEVEIGAALEASIRASHETKQRVTARIIPPRLNSKNLLPANKGSSGSSNFKFKDELNAEASIVGFVGVRPAIGVEVTLGKKGIEGNIGAKLGLEAETRIKHPPFTPYNGGGLKIGKCSRCHRLQGGLNIRGKDLGVQLVKNG 477          
BLAST of Gcaud8378.t1 vs. uniprot
Match: A0A2V3INS1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INS1_9FLOR)

HSP 1 Score: 68.6 bits (166), Expect = 1.480e-9
Identity = 45/203 (22.17%), Postives = 88/203 (43.35%), Query Frame = 0
Query:    1 MSFEVDLKMDTLFWDELGDHQIQINSCDRQGNSHDVLMEITGKNLDPDDYTPGAAFVIDSEHWEKFCSPVPSLEGIDAGDPILFYRINNSTRSPSAMRLHMTAIPGSLVTPSVRLSFINAPLRHHTQKRFVFDDNDGHLYSTTSRMLHDVAHISPDDVFQPDFENPDTFSEVVILPGSNITASGFMEGSFNNFRITRLFQLEV 203
            + + V L    +  D L +H +QI  C R        +E+  +NL   D+    AFVID   W K CS V  +EG+D  D  L   ++ ++ + + + L M+ + G+ V P + +     P+  +     V  ++     + TS +   +  +  D +           ++V +  G+ +     +  + + F++ RL + EV
Sbjct:   28 LEYSVTLNKHAVVCDRLQEHGVQIVCCTRNAVPRRATVELVAENLHASDFAVATAFVIDVNDWNKHCSLVQPVEGVDEADEGLLNVLDVASGNGNQVSLVMSNVSGAEVAPELDIDISEKPVFVNVLPNTVVFNDSPFCATITSFLSTSINSMFIDSLLVAIRPTISHKTKVNLFTGTVLENDALLSVNISKFKVKRLLKTEV 230          
The following BLAST results are available for this feature:
BLAST of Gcaud8378.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3INU4_9FLOR1.130e-17558.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IHV2_9FLOR1.130e-6837.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUH9_9FLOR2.530e-6833.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3INS1_9FLOR1.480e-922.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1026_length_14910_cov_4.896079contigNODE_1026_length_14910_cov_4.896079:8468..9769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8378.t1Gcaud8378.t1Gracilaria caudata M_176_S67 malemRNANODE_1026_length_14910_cov_4.896079 8468..9769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8378.t1 ID=Gcaud8378.t1|Name=Gcaud8378.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=434bp
MSFEVDLKMDTLFWDELGDHQIQINSCDRQGNSHDVLMEITGKNLDPDDY
TPGAAFVIDSEHWEKFCSPVPSLEGIDAGDPILFYRINNSTRSPSAMRLH
MTAIPGSLVTPSVRLSFINAPLRHHTQKRFVFDDNDGHLYSTTSRMLHDV
AHISPDDVFQPDFENPDTFSEVVILPGSNITASGFMEGSFNNFRITRLFQ
LEVGWEQTMKADISSRLIARSSYRATEEREVYRRPIQGAYYSDRFFLFGR
FTVNAFSVVDVVQEVQIESGVDAFVRATYENVQAVTASFSSRRMDANSLL
PPDLASYGTFDINFDSVIEQYVALNGFFGARPGIIIEARLGGTSMVGKFS
ATLGLEASVQYRNPPFEPLPYSSSSRGDCGQCHALQGRAYVKGKDLQYHV
HENGVLVKHKVLDSRLFETELTTVCALTQACSA*
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