Gcaud8372.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud8372.t1 vs. uniprot
Match: A0A2V3J3Z8_9FLOR (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Z8_9FLOR) HSP 1 Score: 268 bits (685), Expect = 8.870e-81 Identity = 152/274 (55.47%), Postives = 195/274 (71.17%), Query Frame = 0
Query: 101 LQLGHIDKSSHWMVP---RAKFVHQEKKSQRTSQREKQRQITAVGENLKMLRLMVGRRSDDDMNTVMKWLDARAKADRQIYDALQRRRGDDMXXXXXXXXXXXXXDICAFKEWLADRYERDRRIGVYVFNWDIP--TSKAPPVCVPLTESV--VQRETPVEWYKLSEESVVAMKDANDQLYCNDEGRDYAEGMYFMGQIAEGLADRAALFFILGAMSLALIGASARLFDKGYSPSGATTHSE-QNVSMPPPSGVDAHLYELDGAEALVRRSLQK 366
LQLGHIDKS WMVP A+ + +EK S++ SQ+ QI+ VGENLKMLRLM+G+RSD+D+ TVMKW+D RAK DRQ+YD LQ+R GDDM XXXXXX YE+DRRIGVY+FNWDI +S + V VP+TE +++E P+EW LSE+S AM +DQ+Y +D +YA+ ++FMGQIAEGL DRAAL F+LGAMS+ L AS L++ GYSPSG T H+E +MPPPSGVDAHLY++ GAE+ V++S+QK
Sbjct: 356 LQLGHIDKSHRWMVPPRKNARRMRREKDSRKASQK----QISVVGENLKMLRLMIGQRSDEDVKTVMKWMDGRAKTDRQLYDVLQKRPGDDMRKVSEWVXXXXXXXXXXXXXXXXXXYEQDRRIGVYIFNWDIAPRSSTSVRVPVPVTEQQGGLEKEKPIEWLMLSEDSAKAMLRFDDQMYYSDSPTEYADVIHFMGQIAEGLVDRAALLFVLGAMSVGLAVASVSLYEDGYSPSGNTVHTEVDRANMPPPSGVDAHLYDMGGAESAVQQSVQK 625
BLAST of Gcaud8372.t1 vs. uniprot
Match: R7QSZ3_CHOCR (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSZ3_CHOCR) HSP 1 Score: 215 bits (548), Expect = 1.260e-61 Identity = 134/277 (48.38%), Postives = 177/277 (63.90%), Query Frame = 0
Query: 102 QLGHIDKSSHWMVP---RAKFVHQEKK-----SQRTSQREKQRQITAVGENLKMLRLMVGRRSDDDMNTVMKWLDARAKADRQIYDALQRRRGDDMXXXXXXXXXXXXXDICAFKEWLADRYERDRRIGVYVFNWDIPTSKA---PPVCVPLTESVVQR-ETPVEWYKLSEESVVAMKDANDQLYCNDEGRDYAEGMYFMGQIAEGLADRAALFFILGAMSLALIGASARLFDKGYSPSGATTHSEQNV--SMPPPSGVDAHLYELDGAEALVRRSL 364
+LGHIDKS WMVP R K+ K+ +R + +QI+AVG+NL+MLRLM+ RRSD+D+ +VM+WL RA+ADR++ DA+ RR +D XXXXXXX E+D RIGVY+FNWDIP SK+ PV V ++E E P EW +LSEE + ++ +DQL+ + DY EG+YFMGQIAE LADRAAL +L AM+ LIG S LFD GYSPSG +T + +N+ +M PSGVDA LYE GAE++++ L
Sbjct: 242 ELGHIDKSRDWMVPPSSRNKWKRGTKQRAYAPGKRDRDKSNDKQISAVGKNLQMLRLMIERRSDEDVRSVMQWLSGRARADRRLADAISARRENDSRRVTEWXXXXXXXXXXXXXXXXXXXXEKDSRIGVYIFNWDIPLSKSMSSTPVPVRVSERRGNPVEKPAEWLRLSEEPRMGLQAFDDQLFHRENPTDYGEGIYFMGQIAENLADRAALVLVLSAMTFGLIGVSGYLFDLGYSPSGQSTQTARNIEGAMSKPSGVDAILYEEGGAESVIQSKL 518
BLAST of Gcaud8372.t1 vs. uniprot
Match: UPI001E1E0105 (psbD mRNA maturation factor Nac2, chloroplastic-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0105) HSP 1 Score: 150 bits (380), Expect = 1.380e-36 Identity = 112/272 (41.18%), Postives = 162/272 (59.56%), Query Frame = 0
Query: 106 IDKSSHWMVPRA---KFVHQE--KKSQRTSQREKQRQITAVGENLKMLRLMVGRRSDDDMNTVMKWLDARAKADRQIYDALQRRRGDDMXXXXXXXXXXXXXDICAFKEWLADRYERDRRIGVYVFNWDIPT------SKAPPVCVPLTESV--VQRETPVEWYKLSEESVVAMKDANDQLYCNDEGRDYA-----EGMYFMGQIAEGLADRAALFFILGAMSLALIGASARLFDKGYSPSGATTHSEQNVSMPPPSGVDAHL--YELDGAE 357
ID S+ W VPR+ + HQ K + ++ +++R++ VGENL+MLR ++ RRSD+D+ TVM+W++ RA+ +R + D + XXXXXXXXXX D+ AFKE++ DRYE+DR IGVY+FN DIP SKA P V + Q P EWY L ES ++++ +D LY ++ D + E + F+G++ GLA R+AL F L +++LA+ G L +GY+P T S + V +PPPSGVDA L Y L E
Sbjct: 469 IDASNDWAVPRSSGPQAPHQRVRKPASSLARGKERRKLLQVGENLQMLRRLIERRSDEDLRTVMQWIERRAREERDLKDKVAAXXXXXXXXXXXXXXXXGEADVAAFKEFIEDRYEKDRLIGVYLFNLDIPPLVKKLGSKAMPAQVVASPEAGDEQAPKPQEWYVLEGESGRSLEEFDDLLYRSEGWVDTSRIEILEAIEFLGKVGSGLATRSALAFALCSLTLAITGMFIYLEYEGYTPRSLDTSSAE-VVLPPPSGVDAALAGYPLQSME 739
BLAST of Gcaud8372.t1 vs. uniprot
Match: A0A1X6PFM5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFM5_PORUM) HSP 1 Score: 137 bits (344), Expect = 3.540e-32 Identity = 79/217 (36.41%), Postives = 117/217 (53.92%), Query Frame = 0
Query: 137 QITAVGENLKMLRLMVGRRSDDDMNTVMKWLDARAKADRQIYDALQRRRGDDMXXXXXXXXXXXXXDICAFKEWLADRYERDRRIGVYVFNWDIPTSKAPPVCVPLTESVVQRETPVEWYKLSEE-SVVAMKDANDQLYCNDEGRDYAEGMYFMGQIAEGLADRAALFFILGAMSLALIGASARLFDKGYSPSGATTHSEQNVSMPPPSGVDAHLYE 352
Q++ + NL+ML+ +VG+R+D+D T++ WLD+RA+AD ++ L RR D D+ AF +W+A RYE DRRIGVYVF DIP S P P+ E PVEW +L E S + + + +++LY + R+ M ++G +AE LA+RAAL L +SL ++ AS L P ++ P GVDA L +
Sbjct: 349 QLSNISTNLRMLKKLVGQRTDEDTRTLLAWLDSRAQADASLFTRLSRRGEADSQKLMQWAARRSANDVNAFSDWVARRYEEDRRIGVYVFGLDIPRSARKPATTPVKVGAAVVEKPVEWLRLKEAPSRMTLAEFDERLYTEETTREAVWVMVWLGNLAESLANRAALTSALAGISLLVVAASLHLMAVTEVP-----ERPPQAAVRPAEGVDAKLIQ 560 The following BLAST results are available for this feature:
BLAST of Gcaud8372.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud8372.t1 ID=Gcaud8372.t1|Name=Gcaud8372.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=373bpback to top |