Gcaud837.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud837.t1
Unique NameGcaud837.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length508
Homology
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BLAST of Gcaud837.t1 vs. uniprot
Match: S0F323_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F323_CHOCR)

HSP 1 Score: 108 bits (269), Expect = 1.460e-21
Identity = 59/129 (45.74%), Postives = 78/129 (60.47%), Query Frame = 0 
Query:    1 MDLNVDAANHHFQPSPKKNPQ---PLTGRTSYRWSNFSKKPPGSNLSVTDITGSRSTIASFRPDAPGYYSLNLAVKGHGVTYSDPIDIFVYDLDDPQQVTSAQSLAASAEQQYYVIGCHFAKPAVEPND 126
            MD          +PS + N     PL GRTSYRWS F ++P G  L+V DI GSRST A F+PDAPG Y+LNL+VKGHG TY+D I + V D+DD +     +S     +Q ++VIGC F+  + +  D
Sbjct:   16 MDSKYHTHASFIRPSSQHNADYDGPLMGRTSYRWS-FLEEPQGCKLTVADIQGSRSTTAWFKPDAPGPYTLNLSVKGHGATYADAIKLRVVDVDDEKDAHLLKS--DDLDQDFFVIGCKFSDKSDKQQD 141
The following BLAST results are available for this feature:
BLAST of Gcaud837.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
S0F323_CHOCR1.460e-2145.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_490_length_23884_cov_4.522254contigNODE_490_length_23884_cov_4.522254:11677..13200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud837.t1Gcaud837.t1Gracilaria caudata M_176_S67 malemRNANODE_490_length_23884_cov_4.522254 11677..13200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud837.t1 ID=Gcaud837.t1|Name=Gcaud837.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=508bp
MDLNVDAANHHFQPSPKKNPQPLTGRTSYRWSNFSKKPPGSNLSVTDITG
SRSTIASFRPDAPGYYSLNLAVKGHGVTYSDPIDIFVYDLDDPQQVTSAQ
SLAASAEQQYYVIGCHFAKPAVEPNDTSHLPSKGKMDIANLSSGFAIPTR
GASTQPSAAPTNPPAANNLYHPAWKRTELAPAASNSNNGHQMPASAHPRT
MALASGNPATTPADYDDNDDEDDDNAHDDDDDDDDAVIGGGGGYEDDDDE
DLEGLESGDDDDDDDEHLGDGAGDDADDGANDDGDQGADDDADGGEDGEG
ADDDANQGDEQEDEEGSDDDENQEEIEIDEEEDISSDVDIEGAEETEPVH
IPVQKEEHEEDDADEMRRDAPEQEEDDEEEEDTGMYDDVEDHQQDEDVED
DEEDDAEDDDEGGGGEDDGDDEIEVDDDQEEPKNITQEDDDDDDDDDDDD
DDDDDDEMMEEQEVPDVFPSGGIEQEQDDDNQRDDENIGDNEEYEDVEIE
NDDDGDE*
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