Gcaud8328.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8328.t1
Unique NameGcaud8328.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length280
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud8328.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013319Glycoside hydrolase family 11/12GENE3D2.60.120.180coord: 52..272
e-value: 1.4E-5
score: 26.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..279
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_345_length_29203_cov_4.997492contigNODE_345_length_29203_cov_4.997492:22038..22877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8328.t1Gcaud8328.t1Gracilaria caudata M_176_S67 malemRNANODE_345_length_29203_cov_4.997492 22038..22877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8328.t1 ID=Gcaud8328.t1|Name=Gcaud8328.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=280bp
MIPTKRINHTCVLIAFALHIGCSQARSVFTDKVCTPSNCPNSATPPTDNG
RSLGNKASGAFKGYVDTWASNGASTFTTDMMVTSSQAWPRISEGTTTQQH
TAGYPISVADYLALRGGRYISYNGWWAKRTNGPNAGKSPRGARYNGAYIW
LNHANNFRSDGKTPIWPYTIEINVWNRHDNGIRSGAKRTADYYDSNGRYE
VWGHDVNAEGDKFYAYYVILKDKTTTDMVLNVKALLRHLLDTTDRLKSWH
QLIEICVAAEGHSGADAKFGADINTMGRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013319GH11/12