Gcaud8327.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8327.t1
Unique NameGcaud8327.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length578
Homology
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BLAST of Gcaud8327.t1 vs. uniprot
Match: A0A2V3IUL3_9FLOR (Cytochrome c oxidase assembly factor 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUL3_9FLOR)

HSP 1 Score: 589 bits (1518), Expect = 4.120e-198
Identity = 402/597 (67.34%), Postives = 451/597 (75.54%), Query Frame = 0 
Query:    3 VGSPTPLHSAAHLLPNGAVAQRLTAAQSVVEQSLRTAQHAIDNNAKNVVHRRRRLPTFSSDDFVGLTRRRRSSDLSHLQSDILPSENKGLTKIDVWSVGWIMYYMATGRHPPTDAWARTNIADELDWSAVPLECRPIIRMCIQTDKERRASLREVKRKIDSTLQALMFAKGLALLDSEKSAAFMLLDKAVGIKSVHAASHTSSSVTAMKPPISPTSV----------------------AAAFGGDD--NEPGTFVRDAELQPLADLDDAAVGDDDVDXXXXXXEEGEEQRHHKVLGLNDKTRVALAALPLCVVRRVEWEAAAHYLRRSDEEIRALRSALMTEKWNKNDVRNGAAAIDYLKKRSLERVSSAQSALGWVYRWGAGGSLKNVSAAMREWEKAVAASGDPEACNGLGLLYHHGRNDVGVDGERARYYYQIAVDQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIERQERHHACRNLAELLWEGAAGVAPARANAVEYFAMAISRGDAGSKKAACSALRQLLQTSLKNREHISNALIDKCSRLLGEGRG 575
            V SPTPLHSAAHL+PNGAVA  LT AQ VVEQSLRTAQH ID   +NV HRRRRLPTFSSDD V  TRRRRSS+LSHL S  L  ++   TKIDVWSVGW+MYYMATG+HPPTDA+AR NIADE+DWSAVPLECRPI+RMCI TDK +RA+LREVKR ID+TLQ LMFAKGLALLD++K++AF+LLDKAVGI+S+          T +  P SPTS                       A+  G  +  +EP T VR+AE+  L  ++                +  +  RH  +LGLNDKTRVALAALPLCVVRRVEWEAAA YLRRS+EEIRALR ALMTEKWNKNDV+NGAAA +YLKKRS E VSSAQSALGW+YRWGAGG LKNVS+AMREWEKAVAA+GDPEACNGLGLLYHHGRN++ VDGE+AR YYQ+AVDQG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AIER+ERHHACR                            +RGDAGS++ A +ALR +LQ  LKN+EHI NALI+KC RLL   RG
Sbjct:  393 VRSPTPLHSAAHLVPNGAVAHALTTAQGVVEQSLRTAQHTIDT--RNVTHRRRRLPTFSSDDIVSFTRRRRSSELSHLDSASLNPDSNAFTKIDVWSVGWLMYYMATGKHPPTDAFARPNIADEIDWSAVPLECRPIVRMCIHTDKHKRATLREVKRNIDTTLQGLMFAKGLALLDNDKNSAFLLLDKAVGIESLDCTG------TRLAHPPSPTSSPSXXXXXXXXXXXXXXXXYSRGASLLGASNVGSEPTTLVRNAEVMSLTQME----------------QHDDPARHKLMLGLNDKTRVALAALPLCVVRRVEWEAAARYLRRSEEEIRALRGALMTEKWNKNDVKNGAAASEYLKKRSAEGVSSAQSALGWIYRWGAGGILKNVSSAMREWEKAVAAAGDPEACNGLGLLYHHGRNEIAVDGEKARRYYQLAVDQGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLAIERRERHHACRXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGDAGSRETARNALRHMLQLVLKNKEHIPNALIEKCGRLLRSDRG 965
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BLAST of Gcaud8327.t1 vs. uniprot
Match: R7QIU5_CHOCR (Sel1-repeat containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIU5_CHOCR)

HSP 1 Score: 252 bits (643), Expect = 9.680e-72
Identity = 145/308 (47.08%), Postives = 199/308 (64.61%), Query Frame = 0 
Query:   92 LTKIDVWSVGWIMYYMATGRHPPTDAWAR-TNIADELDWSAVPLECRPIIRMCIQTDKERRASLREVKRKIDSTLQALMFAKGLALLDSEKSAAFMLLDKAVGIKSVHA--------ASHTSSSVTAMKPPISPTSVAAAFGGDDNEPGTFVRDAELQPLADLDDAAVGDDDVDXXXXXXEEGEEQRHHKVLGLNDKTRVALAALPLCVVRRVEWEAAAHYLRRSDEEIRALRSALMTEKWNKNDVRNGAAAIDYLKKRSLERVSSAQSALGWVYRWGAGGSLKNVSAAMREWEKAVAASGDPEACNG 390
            ++KIDVWSVG ++YYM+TG HPP DAWA+ ++  D  +   +P E + +++MC+Q D ++R  +R+VKR+IDS LQ LMF +GL+LL +++ AAF+LLDKAVG K VHA            S+S+TA  P    T +++       EP   V  A+ +  +                       ++   +V+GLNDKTR  L+ LPL VVRRVEWEAAA YLRRS++E+  LR AL+ ++W K+DV +GAAAI YL +R+ E V+SAQSALGW+YRWGAGG+ K+V  AMR W+ AVA   DPEA NG
Sbjct:  206 MSKIDVWSVGGLLYYMSTGNHPPRDAWAKKSSFLDGKEGRTIPAETKDLVQMCMQRDLKQRVCMRDVKRQIDSVLQGLMFGRGLSLLKTDRKAAFLLLDKAVGFKWVHALGDHEANLGDSASTSLTASHP----TKLSS-------EPSVDVTRADQRSSS----------------TTWSLSRQKAEPEVIGLNDKTRSGLSCLPLVVVRRVEWEAAARYLRRSEKELLHLRRALVDQRWTKSDVSDGAAAIAYLSERAAEGVTSAQSALGWIYRWGAGGAKKDVHEAMRLWKLAVATK-DPEAANG 485
The following BLAST results are available for this feature:
BLAST of Gcaud8327.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IUL3_9FLOR4.120e-19867.34Cytochrome c oxidase assembly factor 7 n=1 Tax=Gra... [more]
R7QIU5_CHOCR9.680e-7247.08Sel1-repeat containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 422..458
e-value: 0.5
score: 19.4
coord: 347..383
e-value: 15.0
score: 12.1
coord: 459..495
e-value: 0.088
score: 21.9
coord: 385..421
e-value: 6.6E-8
score: 42.3
coord: 497..533
e-value: 3.4
score: 16.7
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 423..458
e-value: 0.043
score: 14.5
coord: 347..373
e-value: 96.0
score: 3.9
coord: 385..421
e-value: 4.0E-6
score: 27.3
coord: 460..490
e-value: 78.0
score: 4.2
coord: 498..533
e-value: 1.1
score: 10.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 317..567
e-value: 3.4E-38
score: 133.2
NoneNo IPR availableGENE3D1.10.510.10Transferase(Phosphotransferase) domain 1coord: 81..168
e-value: 2.8E-11
score: 44.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..267
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 407..552
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 407..552
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 332..539
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 1..165
score: 11.213223
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 93..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_345_length_29203_cov_4.997492contigNODE_345_length_29203_cov_4.997492:16631..18364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8327.t1Gcaud8327.t1Gracilaria caudata M_176_S67 malemRNANODE_345_length_29203_cov_4.997492 16631..18364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8327.t1 ID=Gcaud8327.t1|Name=Gcaud8327.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=578bp
MHVGSPTPLHSAAHLLPNGAVAQRLTAAQSVVEQSLRTAQHAIDNNAKNV
VHRRRRLPTFSSDDFVGLTRRRRSSDLSHLQSDILPSENKGLTKIDVWSV
GWIMYYMATGRHPPTDAWARTNIADELDWSAVPLECRPIIRMCIQTDKER
RASLREVKRKIDSTLQALMFAKGLALLDSEKSAAFMLLDKAVGIKSVHAA
SHTSSSVTAMKPPISPTSVAAAFGGDDNEPGTFVRDAELQPLADLDDAAV
GDDDVDDDVDDGEEGEEQRHHKVLGLNDKTRVALAALPLCVVRRVEWEAA
AHYLRRSDEEIRALRSALMTEKWNKNDVRNGAAAIDYLKKRSLERVSSAQ
SALGWVYRWGAGGSLKNVSAAMREWEKAVAASGDPEACNGLGLLYHHGRN
DVGVDGERARYYYQIAVDQGYPPAAVNLGVMLHDGAAGLEPDGVAARGLY
EIASRHGDAIAANNLGLLLRHGAPGVEIDAPAAVRAYELAIERQERHHAC
RNLAELLWEGAAGVAPARANAVEYFAMAISRGDAGSKKAACSALRQLLQT
SLKNREHISNALIDKCSRLLGEGRGGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom_sf