Gcaud8326.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8326.t1
Unique NameGcaud8326.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length121
Homology
[Close]
BLAST of Gcaud8326.t1 vs. uniprot
Match: A0A2V3IGE4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGE4_9FLOR)

HSP 1 Score: 103 bits (258), Expect = 1.580e-26
Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 0 
Query:    1 MGCECDAAHERDMLSARLGELAMTEMENESLRAQVDDLQRAVESVRKQAQDEVDSMVLEMQVLRKRVRLEQGHYVSYSDDEEEQQLLGTEQERDHMATLWLGERALD 107
            M C CDA  ERD+LS RLGELAMTEMENE+LRAQVDDL RAV  +++QA ++ D M+LEM+VL++R  + Q   V YSD+++E        E + M  LWLGE A++
Sbjct:    1 MECACDARQERDLLSTRLGELAMTEMENEALRAQVDDLSRAVHELKRQAHEQRDGMLLEMEVLKRRADMAQHVAVHYSDEDDEV-------EEESMQHLWLGECAVE 100
The following BLAST results are available for this feature:
BLAST of Gcaud8326.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IGE4_9FLOR1.580e-2654.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_345_length_29203_cov_4.997492contigNODE_345_length_29203_cov_4.997492:7708..8070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8326.t1Gcaud8326.t1Gracilaria caudata M_176_S67 malemRNANODE_345_length_29203_cov_4.997492 7708..8070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8326.t1 ID=Gcaud8326.t1|Name=Gcaud8326.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=121bp
MGCECDAAHERDMLSARLGELAMTEMENESLRAQVDDLQRAVESVRKQAQ
DEVDSMVLEMQVLRKRVRLEQGHYVSYSDDEEEQQLLGTEQERDHMATLW
LGERALDAAEVAARLEWHHE*
back to top