Gcaud83.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud83.t1
Unique NameGcaud83.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length492
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud83.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 397..420
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 421..491
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..396
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..113
NoneNo IPR availableTMHMMTMhelixcoord: 392..414
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2338_length_6041_cov_4.872941contigNODE_2338_length_6041_cov_4.872941:1018..2493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud83.t1Gcaud83.t1Gracilaria caudata M_176_S67 malemRNANODE_2338_length_6041_cov_4.872941 1018..2493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud83.t1 ID=Gcaud83.t1|Name=Gcaud83.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=492bp
MARITGDEAMILAVIEAMKVVLVAACISALVNLDNIWSMNILRRRGEVIL
YQNDIGRVTDRAFSKVIRSLYSYGLRRDTLDKGTWEALNANHPRRHGLLR
ASGGGKRIVSVRSALLAASVMVSVADVLALFSLSTEGKDVADKPEFGVRI
QESNDVPIGGRMEWYNPHEGQLRYEYVLRRLGRRMEFRNESELKIDVPRR
LDPNQDEKWPFTLTLSENDKYATVFSRDFTSEETANFSEAVGQVTGTTES
GKVLRHYKMAKRDAERKVCSGSISGVSTSGVNASAVFCYTDELRNTSCVN
KKDGESVPFTMKCSEIRVERFGGNVIFGNDSIWWLNRHAVRGEKSLLQMN
SLRAYKRDDVSPSALIVAAVLTEFPSQVVLVNRQFYTDVSVVIVPNWLII
SSATVLGVILLSSVSASMYAKVKDLVVLSSWQELLISNLLEPLDCLNRAR
KREFRCVVGNGDECSEKKYRFYVEPDAEITPVRLVRRQDIG*
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