Gcaud8296.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8296.t1
Unique NameGcaud8296.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length194
Homology
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BLAST of Gcaud8296.t1 vs. uniprot
Match: A0A2V3IUT5_9FLOR (Chromosomal serine/threonine-protein kinase JIL-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUT5_9FLOR)

HSP 1 Score: 333 bits (855), Expect = 8.760e-108
Identity = 152/192 (79.17%), Postives = 178/192 (92.71%), Query Frame = 0 
Query:    1 MPFETENRSRQEILEDQRKAEIPVNGLSDEGYSLVCALLRPNPLRRPTCEDLKQYPIFAGINWDELMRKGPHPNSVKDVMDKISLEARSREKEGPTTENVGGESGMYLLRNFDPDEWSNMSFSDVSDGCSTASFFKPNFNVIDDLPNMTRWVPGWSLTTDNVVPMSKPQLSVRPLGRKPAARSARRLSEKAY 192
            MPFETENRSRQEILEDQRKAEIP+NGLSDE Y+LVCALLRPNPLRRPTC+DL+Q+PIFAGINW+EL++K PHPNSVKDVMDKIS EARS+EKE P+ E++GGESGMYLLRNFDPDEWSNMSFSD+SDGCSTASFF+P+ N +DDLP++TR +PGW LTTD++VP++KPQL+V   GR+P +RSARRLSEK Y
Sbjct:  547 MPFETENRSRQEILEDQRKAEIPINGLSDEAYALVCALLRPNPLRRPTCQDLRQFPIFAGINWEELIQKKPHPNSVKDVMDKISAEARSQEKEAPSIEHIGGESGMYLLRNFDPDEWSNMSFSDMSDGCSTASFFRPDLNTVDDLPSITRMIPGWGLTTDSIVPLNKPQLAVPSSGRRPISRSARRLSEKTY 738
[Close]
BLAST of Gcaud8296.t1 vs. uniprot
Match: A0A2V3J5M0_9FLOR (Protein kinase C iota type n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5M0_9FLOR)

HSP 1 Score: 79.0 bits (193), Expect = 1.090e-13
Identity = 56/179 (31.28%), Postives = 89/179 (49.72%), Query Frame = 0 
Query:    2 PFETENRSRQEILEDQRKAEIPVNG-LSDEGYSLVCALLRPNPLRRPTCEDLKQYPIFAGINWDELMRKGPHPNSVKDVM-----DKISL----EARSREKEGPTTENVGGESGM------------YLLRNFDPDEWSNMSFSDVSDGCSTASFFKPNFNVIDDLPNMTRWVPGWSLT 158
            PF+  N++  E+ E QR  ++  +  LS E  SL+  LLR  P RR +  D+K++P F G++W  + RK  H + V  ++     +K  L    E R+++    +  +  G SG             YLLRN + +EW ++SFSD  D  +TA F  P  +  +     TR + GW+ T
Sbjct:  454 PFDFRNKNMDEMAEIQRTKQVRYSSSLSLEAVSLIEGLLRLEPSRRSSINDVKKHPFFRGVDWMRVARKEGHADDVSKLVSSKDKNKKGLARLAETRAQQLGIDSELSRSGMSGFDASEISSMTLDRYLLRNINAEEWRHVSFSDDDDRSATAEF-SPAIHR-NGRERETRMIAGWAWT 630
The following BLAST results are available for this feature:
BLAST of Gcaud8296.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IUT5_9FLOR8.760e-10879.17Chromosomal serine/threonine-protein kinase JIL-1 ... [more]
A0A2V3J5M0_9FLOR1.090e-1331.28Protein kinase C iota type n=1 Tax=Gracilariopsis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.510.10Transferase(Phosphotransferase) domain 1coord: 1..93
e-value: 2.4E-7
score: 32.3
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 11..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4700_length_2061_cov_4.819289contigNODE_4700_length_2061_cov_4.819289:1350..1931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8296.t1Gcaud8296.t1Gracilaria caudata M_176_S67 malemRNANODE_4700_length_2061_cov_4.819289 1350..1931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8296.t1 ID=Gcaud8296.t1|Name=Gcaud8296.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=194bp
MPFETENRSRQEILEDQRKAEIPVNGLSDEGYSLVCALLRPNPLRRPTCE
DLKQYPIFAGINWDELMRKGPHPNSVKDVMDKISLEARSREKEGPTTENV
GGESGMYLLRNFDPDEWSNMSFSDVSDGCSTASFFKPNFNVIDDLPNMTR
WVPGWSLTTDNVVPMSKPQLSVRPLGRKPAARSARRLSEKAYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom_sf