Gcaud828.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud828.t1
Unique NameGcaud828.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length95
Homology
BLAST of Gcaud828.t1 vs. uniprot
Match: A0A2V3IE23_9FLOR (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE23_9FLOR)

HSP 1 Score: 115 bits (289), Expect = 4.400e-28
Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = 0
Query:    3 KIGKAVNEELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSVLQQQYASEERKEIADDGGKVGKLLNDVDLVTGIGMK 86
            K+ KAVNEEL PVVER+KIY+TK AS  VLLRP+RAN+AEAATELLSVLQQ+Y  EER+EI  DG  V KLL DVD VTG+G K
Sbjct:  800 KVQKAVNEELEPVVERMKIYITKSASRSVLLRPIRANVAEAATELLSVLQQRYTLEEREEIGVDGELVTKLLEDVDTVTGMGAK 883          
BLAST of Gcaud828.t1 vs. uniprot
Match: A0A7S1XET5_9RHOD (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XET5_9RHOD)

HSP 1 Score: 84.3 bits (207), Expect = 5.050e-17
Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    3 KIGKAVNEELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSVLQQQYASEERKEIADDGGKVGKLLNDVDLVTGI 83
            ++  A+N EL   V R+ IYVTKP S  VLLRP+RAN AEAA+EL+S LQ +Y  EER+EI  DG  + K L+ +D + GI
Sbjct:  463 QVCDAINTELTEAVSRLSIYVTKPTSRSVLLRPIRANFAEAASELISALQTRYTLEEREEIGIDGEAIQKELDSLDEIFGI 543          
BLAST of Gcaud828.t1 vs. uniprot
Match: A0A7S1TD42_9RHOD (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD42_9RHOD)

HSP 1 Score: 84.3 bits (207), Expect = 5.260e-17
Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    3 KIGKAVNEELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSVLQQQYASEERKEIADDGGKVGKLLNDVDLVTGI 83
            ++  A+N EL   V R+ IYVTKP S  VLLRP+RAN AEAA+EL+S LQ +Y  EER+EI  DG  + K L+ +D + GI
Sbjct:  791 QVCDAINTELTEAVSRLSIYVTKPTSRSVLLRPIRANFAEAASELISALQTRYTLEEREEIGIDGEAIQKELDSLDEIFGI 871          
BLAST of Gcaud828.t1 vs. uniprot
Match: A0A1X6NIV0_PORUM (Conserved oligomeric Golgi complex subunit 3 (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIV0_PORUM)

HSP 1 Score: 68.2 bits (165), Expect = 2.280e-11
Identity = 33/75 (44.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    4 IGKAVNEELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSVLQQQYASEERKEIADDGGKVGKLLNDVD 78
            + KA++ +L PVV+R+++Y++  A+  +LLRPVR  +A+AA ELL+ L ++Y+ EER+ I  DG  V +LL  +D
Sbjct:  325 VVKAIDADLPPVVDRLRVYLSSGAAAALLLRPVRRGVADAAAELLAALPRRYSLEEREAIGVDGAAVEELLGRLD 399          
BLAST of Gcaud828.t1 vs. uniprot
Match: A0A7S1TJW8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TJW8_9RHOD)

HSP 1 Score: 62.0 bits (149), Expect = 1.590e-10
Identity = 31/66 (46.97%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   10 EELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSVLQQQYASEERKEIADDGGKVGKLLN 75
            E+L   V R+++Y++KP+S  VLLRP+ +N+AEA  ELLS LQ +Y+ EER+ +  +G  V  LL+
Sbjct:    2 EQLPVSVARMRLYISKPSSRAVLLRPLHSNVAEACRELLSTLQMRYSLEERELMGINGEAVSDLLD 67          
BLAST of Gcaud828.t1 vs. uniprot
Match: A0A5J4YL13_PORPP (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL13_PORPP)

HSP 1 Score: 62.4 bits (150), Expect = 2.730e-9
Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = 0
Query:    8 VNEELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSVLQQQYASEERKEIADDGGKVGKLLNDVDLV 80
            V  +L   V+R+ +Y+TKP++  VLLRP+ AN  EA  EL+++LQ +Y  EE++ I  DG  V  +L  +D +
Sbjct:  889 VRNKLVSSVQRLHLYITKPSTRAVLLRPLYANCVEACRELVALLQMRYTLEEQEIIGIDGSSVHAVLEQIDRI 961          
BLAST of Gcaud828.t1 vs. uniprot
Match: D8TV10_VOLCA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TV10_VOLCA)

HSP 1 Score: 56.6 bits (135), Expect = 2.930e-7
Identity = 22/63 (34.92%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MGKIGKAVNEELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSVLQQQYASEERKEI 63
            +G++  A++  L   V ++++Y+  PA+HG+LL+PV++N+AEA  ++  +LQ +Y+ EE  ++
Sbjct:  846 VGRVNAALSGPLPAAVSKMRLYLPNPATHGILLKPVKSNIAEAHGQIAKLLQMEYSPEEAAQV 908          
BLAST of Gcaud828.t1 vs. uniprot
Match: A0A2N9IPU7_FAGSY (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IPU7_FAGSY)

HSP 1 Score: 53.9 bits (128), Expect = 2.610e-6
Identity = 21/61 (34.43%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    3 KIGKAVNEELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSVLQQQYASEERKEI 63
            K+  A+ +EL PV+E++K+Y+  P +  +L +P++ N+ EA  ++ S+L+ +Y+ EE + I
Sbjct:  929 KVSAAIQQELPPVIEKMKLYLQNPPTRTILFKPIKTNIVEAHVQVQSLLKAEYSPEEIQSI 989          
BLAST of Gcaud828.t1 vs. uniprot
Match: I0YR63_COCSC (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YR63_COCSC)

HSP 1 Score: 53.5 bits (127), Expect = 3.510e-6
Identity = 20/61 (32.79%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    3 KIGKAVNEELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSVLQQQYASEERKEI 63
            ++ +A+ +EL  VV ++++Y+  PA+H +L +P+++N+AEA  ++ S+L+ +Y  EE   +
Sbjct:  671 RVREALQKELPAVVAKMRLYLNNPATHAILFKPIKSNIAEAHGQIASLLESEYTPEEAARV 731          
BLAST of Gcaud828.t1 vs. uniprot
Match: D7KRI4_ARALL (Conserved oligomeric Golgi complex subunit 3 n=6 Tax=Camelineae TaxID=980083 RepID=D7KRI4_ARALL)

HSP 1 Score: 53.1 bits (126), Expect = 4.810e-6
Identity = 20/61 (32.79%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    3 KIGKAVNEELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSVLQQQYASEERKEI 63
            K+  A+ +EL P++ ++K+Y+  P++  +L +P++ N+ EA T++ S+L+ +Y++EE+  I
Sbjct:  708 KVYAAIQQELLPILAKMKLYLQNPSTRTILFKPIKTNIVEAHTQVESLLKAEYSAEEQANI 768          
The following BLAST results are available for this feature:
BLAST of Gcaud828.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3IE23_9FLOR4.400e-2872.62Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S1XET5_9RHOD5.050e-1753.09Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S1TD42_9RHOD5.260e-1753.09Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A1X6NIV0_PORUM2.280e-1144.00Conserved oligomeric Golgi complex subunit 3 (Frag... [more]
A0A7S1TJW8_9RHOD1.590e-1046.97Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4YL13_PORPP2.730e-941.10Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
D8TV10_VOLCA2.930e-734.92Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A2N9IPU7_FAGSY2.610e-634.43Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
I0YR63_COCSC3.510e-632.79Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
D7KRI4_ARALL4.810e-632.79Conserved oligomeric Golgi complex subunit 3 n=6 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_995_length_15379_cov_4.695120contigNODE_995_length_15379_cov_4.695120:12255..12539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud828.t1Gcaud828.t1Gracilaria caudata M_176_S67 malemRNANODE_995_length_15379_cov_4.695120 12255..12539 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud828.t1 ID=Gcaud828.t1|Name=Gcaud828.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=95bp
MGKIGKAVNEELAPVVERIKIYVTKPASHGVLLRPVRANMAEAATELLSV
LQQQYASEERKEIADDGGKVGKLLNDVDLVTGIGMKAFSSLQKY*
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