Gcaud8274.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8274.t2
Unique NameGcaud8274.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length178
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud8274.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..177
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 51..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1463_length_10453_cov_4.528759contigNODE_1463_length_10453_cov_4.528759:4051..4781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8274.t2Gcaud8274.t2Gracilaria caudata M_176_S67 malemRNANODE_1463_length_10453_cov_4.528759 4051..4781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8274.t2 ID=Gcaud8274.t2|Name=Gcaud8274.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=178bp
MGKFQLQIPFLLLEQLLLAYLRRERDGVKESKFKWISKLKNDKRVYIWGR
LLGLLLVVAPAELAALFFAFVSHNNAINWMTFFTWFDLSVVLSPRVAECT
HQAGESCSGAGSVYISTALMGTVGHASATRARWTSLLVMMAVVLVTFVVI
VLFTLRIVLKFNAGRRRGTKADVLCAK*
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