Gcaud8105.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8105.t1
Unique NameGcaud8105.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length541
Homology
BLAST of Gcaud8105.t1 vs. uniprot
Match: A0A2V3IS94_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS94_9FLOR)

HSP 1 Score: 350 bits (898), Expect = 6.270e-112
Identity = 209/519 (40.27%), Postives = 301/519 (58.00%), Query Frame = 0
Query:    3 VPFQPTGVTYFNSVFDRTISNVVFSGFLAFLVLLELENVTEVFMYRAHNINKRSLDQYILFSRVSSMRGMLQTLSGLEYPAREVSTQPPRTSRGFLSRCFGFGARSADADANQPPSVKQAPDAADGSVNGDTTTVADTDHSLSDEESQLPDMSEKLRRIGIPERDGVPRPRVKRYRLIAPIAIRFVVLLLELAAIYSSSNITDNVLAGRSFNVRLERDNNSVSVAAVRNSQCREFIENARGVEQNGTVLLCIDSEENRDLSTR-RENTSVSFRFDPTENVMEYVVEDRFVMTTRVYARVLINLISDDDVQLAPLRPDLDVDSNYSKRVIKGVMNRALNSLGFNVTLSQIRERVDESDVITYDYGRFFDEASRDEIGDALLSELQSFTLALNVTQDDEEDVLYAFKAGRGYFRHEDPVIAVVGRNRLAQGWLIIAWVALLIVRLIAQRFFTVFDELAYPAVKKVHGADLSIGPLARVPKHDTLYISKFSDGRVGHIGYRPANERQDRVSNFHGCEIVLGS 520
            +PFQP GV+ FNS F+    NV+ SG LAFLVLLELENVT+V +YR ++INKRSLD Y+L+SR+SS+R + +TL G+E+ + +V+T P  +      R  G       ++A++ PS K                                           P   GVP P+++  +L+ P+ IRF +L L+L AIYSSS  T +V    +FN+ L  +   +         CR +I++ RGVEQNG VLLCIDSEE+R    +  +NT++ F F P EN  E++V D   M +RV+ +  I+ +S ++V +APLRPDL  D+  ++ ++K VM  AL      + +  IR   D +  +TY+Y    D   R ++ +A+L EL++  L +N T       ++ F  G GY   +   IAVV  NR+AQGW +I WVALL+ RLIA R+ + F+ELAY A+KKVHG  +S+GPLA       +++ KFSDGRVGHIG+RPA+ RQ  V +F  CE+VLG+
Sbjct:    1 MPFQPRGVSVFNSAFETHFPNVLLSGVLAFLVLLELENVTDVLVYRHYSINKRSLDTYMLYSRISSIRSVFRTLGGVEWASNQVATVPKSSVPSHYRRHSG---ERPSSEAHRLPSTKDCT----------------------------------------PR--GVPCPQLRYRKLLFPLLIRFTLLALQLFAIYSSSTTTRDVPVTPNFNLVLSNNTKPLPSPKGNFPSCRSWIQSTRGVEQNGDVLLCIDSEESRRFEGQPSQNTTLHFLFSPDENRFEFIVRDHLAMESRVFVKAKISFLSGENVGVAPLRPDLTSDNGTAEELVKKVMVNALRRQRVEIRMDDIRTFTDSN--VTYNYSCSLDLCDRVKLSNAVLDELRTLKLDVNKTSTG----VWLFN-GTGYIFEDKKAIAVVSSNRVAQGWFLIIWVALLLTRLIANRWLSDFEELAYAALKKVHGERMSVGPLAVTEHRAPVFVRKFSDGRVGHIGFRPASPRQRVVESFQDCEVVLGT 467          
BLAST of Gcaud8105.t1 vs. uniprot
Match: A0A2V3IN11_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN11_9FLOR)

HSP 1 Score: 120 bits (301), Expect = 1.020e-25
Identity = 130/532 (24.44%), Postives = 220/532 (41.35%), Query Frame = 0
Query:    4 PFQPTGVTYFNSVFDRTISNVVFSGFLAFLVLLELENVTEVFMYRAHNINKRSLDQYILFSRVSSMRGMLQTLSGLEYPAREVSTQPPRTSRGFLSRCFGFGARSADADANQPPSVKQAPDAADGSVNGDTTTVADTDHSLSDEESQLPDMSEKLRRIGIPERDGVPRPRVKRYRLIAPIAIRFVVLLLELAAIYSSSNITDNVLAGRSFNVRLERDNNSVSVAAVRNSQCREFIENARGVEQNGTVLLCIDSEENRDLSTRR--ENTSVSFRFDPTENVMEYVVEDRFVMTTRVYARVLINLISDDDVQLAPLRPDLDVDSN--YSKRVIKGVMNR-ALNSLGFNVT------LSQIRER---VDESDVITY--DYGRFFDEASRDEIGDALLSELQSFTLALNVTQDDEEDVLYAFKAGRGYFRHEDPVIAVVGR--NRLAQGWLIIAWVALLIVRLIAQRFFTVFDELAYPAVKKVHGADLSIGPLARVPKHDTLYISKFSDGRVGHIGYRPANERQDRVSNFHGCEIV 517
            PF P G + FN      + N    G    L+L  + ++    +Y   +I KRS+D+YI+FSR+SSMRG+     G+E+P+  +ST P                 S  +    P S K                   T H                          VP+   K  +L AP  +R ++L  E AAIY+ ++++   ++   F+V +      + +  + ++ C  F++ ARG EQ G +L C+     R  +T++  EN S+   F P +N + + + +     TRV  + ++N +  D +QL+P+RPDL +     +   VI GV+N   L   GF  T      +S +  +   + +S++  Y   Y R    +        + S  Q    A     D    V+   +           V+AV+     R+  G+  +A+ A+       Q F    D +         G   ++   +        ++ KFSDG+ GHIG++P+   Q  V +F GC+IV
Sbjct:   10 PFTPKGASIFNRFAVDDLLNSFLGGAFVLLILTYITSILNSLLYPTRSIRKRSIDRYIIFSRISSMRGLYYLFKGIEWPSHLISTAP-----------------SHGSSVKHPDSAK-------------------TSH--------------------------VPQVCRKFTKLFAPCCVRILLLAAEFAAIYAGTSVSRFAISAEGFDVVILPPTYPLKLKEISSTGCDNFLQEARGQEQAGELLKCVFRTIARMPATQQPTENASIILTFVPGQNSLVFQIRNTEHKVTRVELQTVLNTVDGDSLQLSPVRPDLSLSKGKAFFDAVIDGVLNEWGLPHDGFRKTAKGVDAISMLHSQEISLTQSEIADYLVAYLRALPMSLNSTGPPWVFSSGQYKQRA-----DIRIAVIGINRVAHSILLIVVLVLAVIHLIVQRIFPGFDAVAFAAI-------QSF--TGDSIGIGPTATA-GTTNNVWKSSSAQ-----HVQKFSDGKTGHIGFQPSFAGQIPVHSFTGCDIV 459          
The following BLAST results are available for this feature:
BLAST of Gcaud8105.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IS94_9FLOR6.270e-11240.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN11_9FLOR1.020e-2524.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 427..446
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 447..540
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..198
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..178
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 199..426

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1070_length_14265_cov_4.638281contigNODE_1070_length_14265_cov_4.638281:462..2084 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8105.t1Gcaud8105.t1Gracilaria caudata M_176_S67 malemRNANODE_1070_length_14265_cov_4.638281 462..2084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8105.t1 ID=Gcaud8105.t1|Name=Gcaud8105.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=541bp
MVVPFQPTGVTYFNSVFDRTISNVVFSGFLAFLVLLELENVTEVFMYRAH
NINKRSLDQYILFSRVSSMRGMLQTLSGLEYPAREVSTQPPRTSRGFLSR
CFGFGARSADADANQPPSVKQAPDAADGSVNGDTTTVADTDHSLSDEESQ
LPDMSEKLRRIGIPERDGVPRPRVKRYRLIAPIAIRFVVLLLELAAIYSS
SNITDNVLAGRSFNVRLERDNNSVSVAAVRNSQCREFIENARGVEQNGTV
LLCIDSEENRDLSTRRENTSVSFRFDPTENVMEYVVEDRFVMTTRVYARV
LINLISDDDVQLAPLRPDLDVDSNYSKRVIKGVMNRALNSLGFNVTLSQI
RERVDESDVITYDYGRFFDEASRDEIGDALLSELQSFTLALNVTQDDEED
VLYAFKAGRGYFRHEDPVIAVVGRNRLAQGWLIIAWVALLIVRLIAQRFF
TVFDELAYPAVKKVHGADLSIGPLARVPKHDTLYISKFSDGRVGHIGYRP
ANERQDRVSNFHGCEIVLGSGEQLLQRQRQRSARPATMAA*
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