Gcaud8085.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8085.t1
Unique NameGcaud8085.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length274
Homology
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BLAST of Gcaud8085.t1 vs. uniprot
Match: A0A2V3IWN6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWN6_9FLOR)

HSP 1 Score: 93.2 bits (230), Expect = 2.730e-18
Identity = 57/140 (40.71%), Postives = 67/140 (47.86%), Query Frame = 0 
Query:  131 LPQEPGIHKNGMVYFHNTCCSKKDPIPVQRAQALKAMQELPSANCEVWTDGSVGIPEWIKTYRPKRVAVEWDEGYYTGTIQYDEELQKYRDYVETYHRKQGSLPDIVIHYDDNFVMAYSYTATEKVVKDADGHLLTLKPL 270
            LP EPG      V F +  CSK D    Q A   +   ELP    + W DGSVG+PE       KR AVEWDEG+Y GT+ Y E+       V  YH   G+     I YDD F +AYSY A      D D   L +K L
Sbjct:  200 LPDEPGTLHLSRVTFLSARCSKDDTPEAQEAATTQLFHELPKGRFDAWCDGSVGMPE-TPGQNAKRAAVEWDEGWYCGTVCYSEDDGSTHKCVAEYHETLGA--SFWIDYDDGFQIAYSYDAQIGKGIDMDKQALRIKLL 336
The following BLAST results are available for this feature:
BLAST of Gcaud8085.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IWN6_9FLOR2.730e-1840.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_6044_length_1308_cov_4.887062contigNODE_6044_length_1308_cov_4.887062:354..1175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8085.t1Gcaud8085.t1Gracilaria caudata M_176_S67 malemRNANODE_6044_length_1308_cov_4.887062 354..1175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8085.t1 ID=Gcaud8085.t1|Name=Gcaud8085.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=274bp
LDNTLRVALAEPLARYAAGVVVPNAITCAVEEVERARNEASRIQTGCPKS
SPVISLRELVDQPSLYRVAVYQAAKLYEKAMRIAKTAPTPIAVALQNEAV
PRIRTSRSTVKGAAESRLAEIGLLQLPRAPLPQEPGIHKNGMVYFHNTCC
SKKDPIPVQRAQALKAMQELPSANCEVWTDGSVGIPEWIKTYRPKRVAVE
WDEGYYTGTIQYDEELQKYRDYVETYHRKQGSLPDIVIHYDDNFVMAYSY
TATEKVVKDADGHLLTLKPLQVKE
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