Gcaud8045.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8045.t1
Unique NameGcaud8045.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length185
Homology
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BLAST of Gcaud8045.t1 vs. uniprot
Match: A0A2V3IYM3_9FLOR (Protein LURP-one-related 15 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYM3_9FLOR)

HSP 1 Score: 64.3 bits (155), Expect = 5.700e-9
Identity = 53/195 (27.18%), Postives = 90/195 (46.15%), Query Frame = 0 
Query:    5 PKEAPRSPLEHATEYNV--NVRSLS--RYNISHVSNPKPVFKVK--------ERCLHNHNDAPFYHMTITNFHDLRYPARIVHTMSGRTLFVLRRKEY----GSDTIFTWKSNKEEGEPYLRAERNMSLWLYSKKTQFTVKEHANDKLVAEAHPAS-------QERESFVLRVEAGYSAPLMVFFGVSFHSLFTD 176
            P  A R       E+ +  NV S S   ++I      + VFKVK         + L++ +  P Y M + +   LR   +I+   + R +  LR+K +    G+ TI  W+   + G PY+  + ++       +  FT+KE A +++VA     S        E++S+VLR+E G  A L+VFF ++    + D
Sbjct:  106 PPAAARFVFNQRVEFKIKENVFSFSGDSFSIKRTDTGEAVFKVKGNAFSFKDSKSLYDMHGNPIYKM-VESILTLRGRMQILDAATKRPVITLRKKSFIPGFGNSTISAWRGETDSGSPYIEVKGDIF------RKDFTIKELATNRIVATVRRRSFTLSNLLLEKDSYVLRIEPGIDAALIVFFVIAVDEQYRD 293
The following BLAST results are available for this feature:
BLAST of Gcaud8045.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYM3_9FLOR5.700e-927.18Protein LURP-one-related 15 n=1 Tax=Gracilariopsis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1800_length_8346_cov_3.892065contigNODE_1800_length_8346_cov_3.892065:5332..5886 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8045.t1Gcaud8045.t1Gracilaria caudata M_176_S67 malemRNANODE_1800_length_8346_cov_3.892065 5332..5886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8045.t1 ID=Gcaud8045.t1|Name=Gcaud8045.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=185bp
MSPPPKEAPRSPLEHATEYNVNVRSLSRYNISHVSNPKPVFKVKERCLHN
HNDAPFYHMTITNFHDLRYPARIVHTMSGRTLFVLRRKEYGSDTIFTWKS
NKEEGEPYLRAERNMSLWLYSKKTQFTVKEHANDKLVAEAHPASQERESF
VLRVEAGYSAPLMVFFGVSFHSLFTDLVAQGFTS*
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