Gcaud8019.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8019.t1
Unique NameGcaud8019.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length344
Homology
BLAST of Gcaud8019.t1 vs. uniprot
Match: A0A2V3IR24_9FLOR (Transcription initiation factor IIB n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR24_9FLOR)

HSP 1 Score: 616 bits (1588), Expect = 8.820e-222
Identity = 304/337 (90.21%), Postives = 323/337 (95.85%), Query Frame = 0
Query:    7 MPSLAPPMEREMPEECPECGSDDIVENWREGTADCRGCGLILIERLLDLGTEWRTFTSEEGDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDQLTTKVVSTPGEPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICSLTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLLCKEEHRRSAKEIADVTGVAEVTIKSTYRLFYPYIEGVVPEDFECAVSVSDLPQP 343
            MPSLAPPMEREMP+ECPECGSDDIVENWR+G+ADCRGCGL++ ERLLDLGTEWRTFT+EEGDDPNRAGPANNPLLEFEHGT IGTGAKGGGALS+SLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQD LTTK V+ PGE +KRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEIC+LTGVPKKNVGATVKKME+ LTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVA+EMQNHEVLHGKTYTTLAAASIYIVT LCK E +RSAK+IA+VTGVAEVTIKSTYRLFYPYIEGV+PE+ E A+ VS+LP P
Sbjct:    1 MPSLAPPMEREMPQECPECGSDDIVENWRQGSADCRGCGLVIAERLLDLGTEWRTFTAEEGDDPNRAGPANNPLLEFEHGTGIGTGAKGGGALSISLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDHLTTKNVAGPGEAEKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKMEQALTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAHEMQNHEVLHGKTYTTLAAASIYIVTQLCKREDKRSAKDIAEVTGVAEVTIKSTYRLFYPYIEGVIPEELETAIKVSELPAP 337          
BLAST of Gcaud8019.t1 vs. uniprot
Match: R7QNA6_CHOCR (TFIIB-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNA6_CHOCR)

HSP 1 Score: 458 bits (1178), Expect = 1.690e-159
Identity = 233/330 (70.61%), Postives = 271/330 (82.12%), Query Frame = 0
Query:   14 MEREMPEECPECGSDDIVENWREGTADCRGCGLILIERLLDLGTEWRTFTSEEGDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDQLTTKVVSTPGEPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICSLTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLLCKEEHRRSAKEIADVTGVAEVTIKSTYRLFYPYIEGVVPEDFECAVSVSDLPQP 343
            MERE+PEECPEC SDDI+E+W  G A CR CGL++ +RLLDLGTEWRTFT+EEGDDPNRAGPA NPLLE E GTSIG GA+GGG L+ +LNRAQ RNA S ADKVM+ V+ RI R+ ERL+L  S+S RA ELFKRY+D LT K   T   PD   R+R LR+EEV+EI+ASSLFIACRN+K AR+YKEIC LT VPKKNVGATVKKME  L  AKTTYVRGTDDFVTRF N LDLPRDVINAADAVAN +QN E ++GKTYTT+AA+SIY+VT L  ++H R+AKEIADVTGVA+VTIK+TYRL YPYI+ V+P+DF+ A  +S LP P
Sbjct:    1 MERELPEECPECESDDIIEDWAHGNAVCRSCGLVVQDRLLDLGTEWRTFTAEEGDDPNRAGPAANPLLEGEQGTSIGNGARGGGQLNKALNRAQQRNAISDADKVMIAVMGRIDRFCERLSLTGSISKRAKELFKRYRDHLTLK--KTASNPDVFTRSRPLRDEEVSEIIASSLFIACRNEKAARTYKEICGLTKVPKKNVGATVKKMELVLEGAKTTYVRGTDDFVTRFCNLLDLPRDVINAADAVANALQNQEGVYGKTYTTVAASSIYVVTQLSDDKHVRTAKEIADVTGVADVTIKTTYRLIYPYIKKVLPKDFKPAKPLSRLPPP 328          
BLAST of Gcaud8019.t1 vs. uniprot
Match: A0A7S3EGB1_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EGB1_9RHOD)

HSP 1 Score: 275 bits (704), Expect = 2.040e-87
Identity = 148/350 (42.29%), Postives = 225/350 (64.29%), Query Frame = 0
Query:    1 MSSVNG--MPSLAPPMEREMPEECPECGSDDIVENWREGTADCRGCGLILIERLLDLGTEWRTFTSEE-GDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDQLTTKVVSTPGEPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICSLTGVPKKNVGATVKKMERQ----LTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLLCKEEHRRSAKEIADVTGVAEVTIKSTYRLFYPYIEGVVPEDFECAVSVSDLPQP 343
            M+ +N   +PSLAP +ER+ PEECPECGS DIVE+W+EG   CR CGL++ E+L+DLG EWRTFT++E G DPNRA    NPLLE    TSI    +GG  +  SLNRAQN +  SA+D+ +++V   I +  ER ++   V +R  E+FK Y D LT +   T        R R+LREEE  +I+A  L ++ R + + R++ EI  +TGVPK+++G  VK ++++    +  + TTY    +D V R  + L L R V+NAA  +AN+ ++ + ++G+T  ++AAA I+I+  L  ++ R++AK+++D   VAEVTI++ Y   YP+++G++PE +E +    DLP P
Sbjct:    1 MAKINSSVLPSLAPELERDTPEECPECGSPDIVEDWKEGQNVCRSCGLVIQEKLVDLGCEWRTFTNDEPGADPNRASGPANPLLESGANTSISM--EGGRGIGSSLNRAQNMHTISASDRYLLDVFAEISKLCERNSIPHKVQERCNEMFKLYYDVLTLRADGT--------RVRSLREEETKQIIAGVLLLSLRGENMTRTFTEISRMTGVPKRDLGRVVKLIDKRVKSTIATSATTYT-SMEDVVLRCCSALGLERKVVNAATELANKARDLDRVYGRTPVSIAAACIFIICQLGPQDERKTAKQVSDAALVAEVTIRAAYNKIYPHLKGILPEGYENSERFKDLPVP 339          
BLAST of Gcaud8019.t1 vs. uniprot
Match: A0A5J4YSQ3_PORPP (Transcription initiation factor IIB n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSQ3_PORPP)

HSP 1 Score: 270 bits (691), Expect = 2.780e-85
Identity = 152/336 (45.24%), Postives = 214/336 (63.69%), Query Frame = 0
Query:    2 SSVNGMPSL--APPMEREMPEECPECGSDDIVENWREGTADCRGCGLILIERLLDLGTEWRTFTSEE-GDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDQLTTKVVSTPGEPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICSLTGVPKKNVGATVKKMERQL-TDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLLCKE-EHRRSA-KEIADVTGVAEVTIKSTYRLFYPYIEGVVPEDF 331
            ++V G P +  AP +ER++PE+C ECGSDDIVE+W++GT  CRGCGL+L   ++DLG+EWRTFTS+E G DPNR G   NPLLE    T I    +  G     LNRAQ RNA S++D+ +M+V  +IG+  E  +++K V DR  E+FKRY D LT K   T        R+R+L E+E NEI+A++L IA R+  +ARS+KEI +LT VPK+N+GA VK +ER +    +        DF+ R+ N L LP  V NAA  V  +++  + ++GK   ++ AA +Y+V  + ++ EHR+   KEI  V GVAE T++ TYR    Y + +VP DF
Sbjct:   25 ANVAGAPIMIHAPGLERDLPEQCTECGSDDIVEDWKQGTLVCRGCGLVLQAEIVDLGSEWRTFTSDEPGQDPNRVGGPANPLLESGPTTKIRDELRAAG-----LNRAQKRNAISSSDRYLMDVFSKIGQIAEHFSISKVVVDRTEEIFKRYYDVLTLKPDGT--------RSRSLPEDETNEIIAAALLIAFRDDGIARSFKEIVTLTKVPKQNIGARVKLIERDIGKSVRHAEPSSASDFIPRYCNRLSLPPSVSNAALHVYEKVRERDGVYGKQPNSIIAACLYLVCQISRDPEHRKKTPKEIGGVAGVAEATVRQTYRTVQEYTKEIVPSDF 347          
BLAST of Gcaud8019.t1 vs. uniprot
Match: M2XIZ1_GALSU (Transcription initiation factor TFIIB n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XIZ1_GALSU)

HSP 1 Score: 214 bits (544), Expect = 1.610e-63
Identity = 130/326 (39.88%), Postives = 200/326 (61.35%), Query Frame = 0
Query:    9 SLAPPMEREMPEECPECGSDDIVENWREGTADCRGCGLILIERLLDLGTEWRTFTSEE-GDDPNRAGPANNPLLEFEHGTSIGTGAKGGG-ALSVSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDQLTTKVVSTPGEPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICSLTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLLCK----EEHRRSAK-EIADVTGVAEVTIKSTYRLFYPYIEGVV 327
            SLAP +  ++P+ C ECGSDD+VE+  +G   CR CGL+  ER++DLG+EWR F +++ G DP+R G  NNPLLE    T IG GA     +L+  LNRAQNR+ TS +D+V+++    I +Y ER  L++ V DRA ELFK Y D LT   ++  G      RTR L+E E   +VA+SL  A + + V R++KE+ SLT VPKK +  T  KM++ L   +    + T+DF+ RF  +L LP   I+ A  +    ++ + ++G++Y T+AAA+IY     C+    EE ++  + ++  V+GV  VTI +T+++  P+ + ++
Sbjct:   12 SLAPQLNADVPDTCKECGSDDLVEDHAQGDVICRNCGLVAAERIVDLGSEWRNFENDDSGTDPSRVGGPNNPLLESGPSTVIGGGAVSDSRSLNARLNRAQNRHNTSKSDRVLLDAFSLISQYAERSYLSQRVVDRAQELFKLYFDHLT---LNPQGG-----RTRYLKEHETVSVVAASLHWASQIEGVPRTFKEMSSLTQVPKKTLSDTYLKMKQSLKLNQLN--KSTEDFIGRFCFYLRLPHFFISKALQIVQVCRDVDGVYGRSYVTIAAAAIYTA---CEKFGDEELKKMVRLQLPKVSGVEIVTIVNTFKIMKPHSDKIL 324          
BLAST of Gcaud8019.t1 vs. uniprot
Match: M1USL8_CYAM1 (Transcription initiation factor IIB n=2 Tax=cellular organisms TaxID=131567 RepID=M1USL8_CYAM1)

HSP 1 Score: 215 bits (547), Expect = 2.020e-63
Identity = 131/336 (38.99%), Postives = 188/336 (55.95%), Query Frame = 0
Query:   11 APPMEREMPEECPECGSDDIVENWREGTADCRGCGLILIERLLDLGTEWRTFTSEEGD-DPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDQLTTKVVSTPGEPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICSLTGVPKKNVGATVKKMERQLTDA-KTTYVRGTDDFVTRFGNFLDLPRDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLLCKEEHRRS------------AKEIADVTGVAEVTIKSTYRLFYPYIE-GVVPEDF 331
            AP MER++P+ C ECGS D+VE+ + G   C  CG++  E L+DLG EWRTF +++   DPNR G + NPLL+    TSI  G  G  AL+  L RAQ+RN   A D+ + E   RI    ER  L + V DRA EL + Y D LT       G    R R R  RE+E   I++++LFIACRN+   R++ EI  +  V K  V A VK ME  + +A K + +R TDDFV+RF ++L++P  V +  + VA      + +HG+T  ++AA +IY V LL +E   +S               IA+V+G+ E  +K+       Y + G++P D+
Sbjct:    3 APTMERDVPDVCGECGSTDLVEDTKNGDLVCAQCGVVAAELLIDLGHEWRTFENDDSAYDPNRVGGSINPLLDSGLATSISQGPAGANALNERLARAQSRNVLDANDRYVTECYNRISYLCERSGLPQLVKDRACELLRLYYDHLTL------GADGVRARAR-FREDETASIISAALFIACRNEGFPRTFNEISVIVSVAKSRVAAYVKAMEMSIGEAAKISRIRTTDDFVSRFCSYLEIPNIVRSLVNQVARAAAEKDGIHGRTLVSIAAGAIYFVLLLWRETCPQSIPATLRVSDEALVNRIAEVSGITEGVVKTVASRIRQYRDRGLLPPDW 331          
BLAST of Gcaud8019.t1 vs. uniprot
Match: A9BL15_HEMAN (TfIIB n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BL15_HEMAN)

HSP 1 Score: 209 bits (531), Expect = 1.980e-61
Identity = 112/318 (35.22%), Postives = 190/318 (59.75%), Query Frame = 0
Query:   20 EECPECGSDDIVENWREGTADCRGCGLILIERLLDLGTEWRTFTSEE-GDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDQLTTKVVSTPGEPDKRVRTR-TLREEEVNEIVASSLFIACRNQKVARSYKEICSLTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLLCKEEHRRSAKEIADVTGVAEVTIKSTYRLFYPY----IEGVVPEDF 331
            E+C +CGS++++E+ ++G   C  CGL+L    +D  +EWR F  ++ G DP R G  N+PLLE   GT I  G +G   L+  L   QN++     D+ + +   +I  + E+  L K + +R  ELFK Y D LT +   +        RTR +LR++E    +A+S+FI  RN+ + R+++EI   T VPKK +G+ V+ +ER L   K + +R T+DF++RF + L LP  +   A+ +A  ++  E L+GK Y +++AASI++++ L   +++ +AKEIA V G++E+T++ T +  YPY    ++ ++P +F
Sbjct:   20 EKCTDCGSENLLEDKKQGDLICFECGLVLTSHNIDFTSEWRCFADDQRGKDPTRIGDPNHPLLESNSGTLISKGLRGANNLNERLATTQNQSNLQKTDRFLTQSFSKINLFLEKNFLFKGIKERVEELFKSYFDYLTLRSDGS--------RTRYSLRKDETLSSIAASIFIVSRNEGIPRTFREIYETTKVPKKEIGSRVRAIERSLRGVKISKIRNTEDFISRFCSKLGLPVFISRLAEKLAKTVREKEGLYGKNYISVSAASIHVISQLSPIKNKCTAKEIAKVAGISEITLRLTQKAMYPYRDKILKTLIPPNF 329          
BLAST of Gcaud8019.t1 vs. uniprot
Match: A0A1X6NJZ0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJZ0_PORUM)

HSP 1 Score: 197 bits (501), Expect = 1.810e-57
Identity = 123/310 (39.68%), Postives = 176/310 (56.77%), Query Frame = 0
Query:   78 NPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDQLTTKVVSTPGEPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICSLTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLL--------------------CKEEHR------------------------RSAKEIADVTGVAEVTIKSTYRLFYPYIEGVVPEDFECAVSVSDLPQP 343
            NPLLE    T I  G  G G ++ SLNRAQNRNA SAADK +++V  R+ R  ER +++  V DRA E+FKRY D LT K        +   RTR L+E+E   IVA+ LF+A RN+   R++KE+C+++ VPKK +G  +K +ER L D ++  VRG++DFV R+ + L+L R V+N A+ VA   +  E ++GKTY +LAAA+I++V  L                     K++ +                        R+AKEIA V GVAEVTI+ TY+  +P++  V+PE +  A  +  LP P
Sbjct:    2 NPLLESGPTTDISKGG-GAGGMNQSLNRAQNRNAISAADKYLLDVFGRVARLAERSHMSGGVRDRAKEMFKRYYDVLTLK--------EGGGRTRALKEDETASIVAACLFLAARNEGAPRTFKEVCAVSQVPKKEIGGRMKAIERALEDVRSGVVRGSEDFVGRYCSQLNLGRSVVNDANEVATGARECEGVYGKTYVSLAAAAIFVVCQLPEVAEGTPPPGTAAAGGKKEVKKDPKVGEKRGRETAAVSGAGANGTSARFRTAKEIATVAGVAEVTIRVTYKAMFPHLGRVLPERYRRANIIGALPPP 302          
BLAST of Gcaud8019.t1 vs. uniprot
Match: A0A8B7XTT8_ACAPL (Transcription initiation factor IIB n=2 Tax=Valvatida TaxID=41166 RepID=A0A8B7XTT8_ACAPL)

HSP 1 Score: 196 bits (499), Expect = 4.160e-57
Identity = 115/324 (35.49%), Postives = 185/324 (57.10%), Query Frame = 0
Query:   22 CPECGSDDIVENWREGTADCRGCGLILIERLLDLGTEWRTFTSEEG-DDPNRAGPANNPLLEF-EHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDQLTTKVVSTPGEPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICSLTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLLCKEEHRRSAKEIADVTGVAEVTIKSTYRLFYPYIEGVVPEDFECAVSVSDLPQP 343
            CP+    ++VE++  G   C  CGL++++R +D+G+EWRTF++++   DP+R G A NPLL   +  T IG  +   G       + QNR   S++D+ ++   + I    +R+NL +++ DR   LFK+  +Q                  R+LR    + I A+ L+IACR + V R++KEIC+++ V KK +G   K + R + +A  + +  + DF++RF   L LP  V  AA  VAN+    +++ G++  ++AAA+IY+ +   KE  +R+ KEI D+ GVAE+TIK +YRL YP    + PEDF+    V DLP P
Sbjct:    6 CPQHPEANLVEDYHAGDMICPECGLVVVDRCIDVGSEWRTFSNDKATSDPSRVGAAENPLLSGGDLSTIIGKPSGSSGYGEDGQAKYQNRKQVSSSDRALLSAFREISHMSDRINLPRTIVDRTNGLFKQVHEQ------------------RSLRGRSNDAIAAACLYIACRQEGVPRTFKEICAVSRVSKKEIGRCFKLIIRAI-EANVSLIN-SGDFMSRFCANLSLPTSVQKAATYVANKAVELDLVPGRSPISVAAAAIYMASQASKE--KRTQKEIGDIAGVAEITIKQSYRLMYPRAMDLFPEDFKFVTRVEDLPLP 307          
BLAST of Gcaud8019.t1 vs. uniprot
Match: J7GA43_9CRYP (TATA binding protein of transcription factor IID n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7GA43_9CRYP)

HSP 1 Score: 197 bits (500), Expect = 8.040e-57
Identity = 110/310 (35.48%), Postives = 176/310 (56.77%), Query Frame = 0
Query:   20 EECPECGSDDIVENWREGTADCRGCGLILIERLLDLGTEWRTFTSE-EGDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDQLTTKVVSTPGEPDKRVRTR-TLREEEVNEIVASSLFIACRNQKVARSYKEICSLTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLLCKEEHRRSAKEIADVTGVAEVTIKSTYRLFYPYIEGVV 327
            E C ECGS++++E+ ++G   C+ CG++L   ++D  +EWR F+ + +  DP R G   + LLE   GT I  G KG   L+  L + QNR      D+ + +V  +IG + E++ L   +  R  E FK Y D LT +   T        R+R +LR+ E    +A+S+FI  RN+K+ R++KEI   TGV KK + A V+ +ER L     + +  TDDFV+RF + L LP  V + +  +A  M++ E L+G+ Y +++AASI +VT L     +   K+IA   G++E+T+   Y+  YP+ E ++
Sbjct:   19 ERCIECGSENLLEDMKQGDIVCKECGMVLTGHIVDFTSEWRIFSEDNKKSDPIRIGDPLHELLEKNPGTLISKGLKGSNILNEKLLKTQNRGTVQKTDRFLTQVFSKIGLFLEKICLFMGIKKRVEEFFKLYFDYLTLRTDGT--------RSRYSLRKNETVSSIAASIFIVSRNEKIPRTFKEISEATGVSKKALSARVRAIERSLRGTNISKLHNTDDFVSRFCSKLGLPSFVSDLSKKLAKFMKDQEGLYGRNYISVSAASILLVTQLTNLNLKCPPKKIASAAGISEITLNIAYKSMYPHREKIL 320          
The following BLAST results are available for this feature:
BLAST of Gcaud8019.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IR24_9FLOR8.820e-22290.21Transcription initiation factor IIB n=1 Tax=Gracil... [more]
R7QNA6_CHOCR1.690e-15970.61TFIIB-type domain-containing protein n=1 Tax=Chond... [more]
A0A7S3EGB1_9RHOD2.040e-8742.29Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YSQ3_PORPP2.780e-8545.24Transcription initiation factor IIB n=1 Tax=Porphy... [more]
M2XIZ1_GALSU1.610e-6339.88Transcription initiation factor TFIIB n=1 Tax=Gald... [more]
M1USL8_CYAM12.020e-6338.99Transcription initiation factor IIB n=2 Tax=cellul... [more]
A9BL15_HEMAN1.980e-6135.22TfIIB n=1 Tax=Hemiselmis andersenii TaxID=464988 R... [more]
A0A1X6NJZ0_PORUM1.810e-5739.68Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A8B7XTT8_ACAPL4.160e-5735.49Transcription initiation factor IIB n=2 Tax=Valvat... [more]
J7GA43_9CRYP8.040e-5735.48TATA binding protein of transcription factor IID n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000812Transcription factor TFIIBPRINTSPR00685TIFACTORIIBcoord: 307..321
score: 47.56
coord: 34..54
score: 34.29
coord: 210..225
score: 32.08
coord: 56..69
score: 44.29
coord: 69..90
score: 30.0
coord: 184..203
score: 48.33
coord: 239..257
score: 40.0
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 21..326
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 124..223
e-value: 7.0
score: 2.1
coord: 238..321
e-value: 0.0037
score: 26.5
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 238..320
e-value: 3.47902E-7
score: 45.6925
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 123..225
e-value: 1.59175E-5
score: 41.0701
IPR013150Transcription factor TFIIB, cyclin-like domainPFAMPF00382TFIIBcoord: 236..320
e-value: 6.1E-18
score: 64.6
coord: 179..223
e-value: 3.6E-8
score: 33.3
IPR013137Zinc finger, TFIIB-typePFAMPF08271TF_Zn_Ribboncoord: 22..62
e-value: 4.7E-9
score: 35.6
IPR013137Zinc finger, TFIIB-typePROSITEPS51134ZF_TFIIBcoord: 18..49
score: 8.516266
NoneNo IPR availableGENE3D1.10.472.170coord: 21..225
e-value: 2.1E-44
score: 153.7
NoneNo IPR availableGENE3D1.10.472.10coord: 235..342
e-value: 1.4E-22
score: 81.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR11618:SF13TRANSCRIPTION INITIATION FACTOR IIBcoord: 21..326
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 19..65
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 122..225
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 237..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_47_length_66049_cov_4.331180contigNODE_47_length_66049_cov_4.331180:14267..15298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8019.t1Gcaud8019.t1Gracilaria caudata M_176_S67 malemRNANODE_47_length_66049_cov_4.331180 14267..15298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8019.t1 ID=Gcaud8019.t1|Name=Gcaud8019.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=344bp
MSSVNGMPSLAPPMEREMPEECPECGSDDIVENWREGTADCRGCGLILIE
RLLDLGTEWRTFTSEEGDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALS
VSLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRY
QDQLTTKVVSTPGEPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSY
KEICSLTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLP
RDVINAADAVANEMQNHEVLHGKTYTTLAAASIYIVTLLCKEEHRRSAKE
IADVTGVAEVTIKSTYRLFYPYIEGVVPEDFECAVSVSDLPQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB
IPR013763Cyclin-like
IPR013150TFIIB_cyclin
IPR013137Znf_TFIIB
IPR036915Cyclin-like_sf