Gcaud7992.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7992.t2
Unique NameGcaud7992.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length423
Homology
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BLAST of Gcaud7992.t2 vs. uniprot
Match: A0A2V3ITM6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITM6_9FLOR)

HSP 1 Score: 431 bits (1107), Expect = 4.090e-146
Identity = 237/389 (60.93%), Postives = 284/389 (73.01%), Query Frame = 0 
Query:    1 MPSW-YSDDELSLLRYTPMSP--DFRTSNGAYVLPFDIPSESPRYQPSPAGSGRRRPSRSIPKPTITFANYEAKNRAPQFVVPTPSPDEPIPVQWLSSPDAFELLCNDSRLSRATKYDRTVACFNLYPATKSDLQINHLIWTVAQKGEYNPMHGNLLLQNNVLSLAMPHEFYDFLHQITEEELKQSMLEVLALIAEDEDAEGLSLMQSELEPSIWEDLVEYMDGCDPQSHCRMDSKTKDGRRLMISVESLLRFCYLSPWKIDIYASYITPQEFNNALQALMVQKTMSSSEREQDSPRHSFDRRLVRSNARRPVASLSQTSRLLVSSNGN-CSDRNRVFWKLFQDWRRHREVLVQFLGISPALAVQTMVDSISYGTQEDAWKRMETVMAC 385
            MPS  YS+DEL LLRYTPMSP  D R           I S S     S   S   +   +  KP I FANY+ ++  PQFVVPTPS D+P+ V+W  SP AF    +DS L++ T+Y RT+ACFNLYPA + DLQINHLIW  AQ+GEY P  GNLLL NN+LSL+MP EF+ FL  ++EEELKQSMLEVLALIAEDEDAEGLSLM+SELEPSIWEDL  Y+  C+  S CRMD ++K+GR+LM +VESLLRFCYLSPWKIDIYASYI+P E N  LQ +  +K M+  E + DS ++S DRRLVRS+ARRPV+S   TS   VSS  N  + RN +FWK+FQDWRR+R VLVQFLG+SP+ AVQ MVDSIS GTQ+ AW+R ETV+AC
Sbjct:    1 MPSSSYSEDELKLLRYTPMSPHLDPRCGPTYNHSASVINSNSSDSIVSQNVSSTAKCHNT--KPIILFANYDKRSTKPQFVVPTPSLDDPVAVKWRHSPHAFRAFRHDSSLAQWTRYGRTIACFNLYPAKEHDLQINHLIWNAAQRGEYCPSDGNLLLHNNILSLSMPREFFHFLRSVSEEELKQSMLEVLALIAEDEDAEGLSLMKSELEPSIWEDLTLYIRACETPS-CRMDVRSKEGRKLMTAVESLLRFCYLSPWKIDIYASYISPMELNGMLQCM--EKNMNVFENDLDSMQYSRDRRLVRSHARRPVSSSCPTSHYFVSSRSNFLTVRNCIFWKMFQDWRRYRMVLVQFLGLSPSDAVQIMVDSISRGTQDRAWERAETVLAC 384
The following BLAST results are available for this feature:
BLAST of Gcaud7992.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ITM6_9FLOR4.090e-14660.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_675_length_19862_cov_4.263113contigNODE_675_length_19862_cov_4.263113:3867..5432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7992.t2Gcaud7992.t2Gracilaria caudata M_176_S67 malemRNANODE_675_length_19862_cov_4.263113 3867..5432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7992.t2 ID=Gcaud7992.t2|Name=Gcaud7992.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=423bp
MPSWYSDDELSLLRYTPMSPDFRTSNGAYVLPFDIPSESPRYQPSPAGSG
RRRPSRSIPKPTITFANYEAKNRAPQFVVPTPSPDEPIPVQWLSSPDAFE
LLCNDSRLSRATKYDRTVACFNLYPATKSDLQINHLIWTVAQKGEYNPMH
GNLLLQNNVLSLAMPHEFYDFLHQITEEELKQSMLEVLALIAEDEDAEGL
SLMQSELEPSIWEDLVEYMDGCDPQSHCRMDSKTKDGRRLMISVESLLRF
CYLSPWKIDIYASYITPQEFNNALQALMVQKTMSSSEREQDSPRHSFDRR
LVRSNARRPVASLSQTSRLLVSSNGNCSDRNRVFWKLFQDWRRHREVLVQ
FLGISPALAVQTMVDSISYGTQEDAWKRMETVMACWHVKVAANRVEVGLR
GRSESVIFQFSQKLCFLNEGQS*
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