Gcaud7978.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud7978.t1 vs. uniprot
Match: A0A2V3IQV7_9FLOR (40S ribosomal protein S4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQV7_9FLOR) HSP 1 Score: 503 bits (1296), Expect = 7.310e-180 Identity = 241/263 (91.63%), Postives = 258/263 (98.10%), Query Frame = 0
Query: 1 MARGPKKHLKRLSAPSHWMLDKMGGVWAPRPSTGPHKLRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNEIFRLLYDIKGRFVLHLITKAEGAYKLCKVKRQQTGQKGVPYIATHDARTIRYPDPLIKVDDTVRINIDTGKIEDILKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKNKGLRKSIIEEQESRIKSKPVMV 263
MARGPKKHLKRL+APSHWMLDKMGGVWAPRPSTGPHK+RECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNE FRLL+D+KGRF+LHLITKAEGAYKLCKVKRQQTGQKGVPYI THDARTIRYPDP++ DD+VRIN+++GKIED+LKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPK KGLRKS+IE+QESR+KS+PV+V
Sbjct: 1 MARGPKKHLKRLNAPSHWMLDKMGGVWAPRPSTGPHKMRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNETFRLLFDVKGRFILHLITKAEGAYKLCKVKRQQTGQKGVPYITTHDARTIRYPDPIVSADDSVRINMESGKIEDVLKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKQKGLRKSVIEDQESRLKSQPVVV 263
BLAST of Gcaud7978.t1 vs. uniprot
Match: R7Q6M6_CHOCR (40S ribosomal protein S4 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6M6_CHOCR) HSP 1 Score: 483 bits (1244), Expect = 6.170e-172 Identity = 235/263 (89.35%), Postives = 250/263 (95.06%), Query Frame = 0
Query: 1 MARGPKKHLKRLSAPSHWMLDKMGGVWAPRPSTGPHKLRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNEIFRLLYDIKGRFVLHLITKAEGAYKLCKVKRQQTGQKGVPYIATHDARTIRYPDPLIKVDDTVRINIDTGKIEDILKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKNKGLRKSIIEEQESRIKSKPVMV 263
MARGPKKHLKRL+APSHWMLDKMGGVWAPRPSTGPHK+RE LPLNLILRNRL+YAL GREAN IVMQRLIKVDGKVRTDKTFPAGFMDV+TI++T+E FRLLYD+KGRF LHLITK EGAYKLCKVKRQQTG KGVPYIATHDARTIRYPDP+IKVDDTVR+NI TGKIEDILKFEVGNLCMITGGHNIGR+GIIQLREKHPGSHEI+RVRDA GHDFATRKTNVFIIGKGSE AISL KNKGL+KSIIEEQE+R K+KPV V
Sbjct: 1 MARGPKKHLKRLNAPSHWMLDKMGGVWAPRPSTGPHKMRESLPLNLILRNRLRYALTGREANMIVMQRLIKVDGKVRTDKTFPAGFMDVVTIEKTDETFRLLYDVKGRFKLHLITKDEGAYKLCKVKRQQTGMKGVPYIATHDARTIRYPDPVIKVDDTVRVNIGTGKIEDILKFEVGNLCMITGGHNIGRIGIIQLREKHPGSHEIIRVRDAMGHDFATRKTNVFIIGKGSEPAISLLKNKGLKKSIIEEQEAREKAKPVAV 263
BLAST of Gcaud7978.t1 vs. uniprot
Match: M2Y295_GALSU (40S ribosomal protein S4 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y295_GALSU) HSP 1 Score: 404 bits (1037), Expect = 2.040e-140 Identity = 191/259 (73.75%), Postives = 222/259 (85.71%), Query Frame = 0
Query: 1 MARGPKKHLKRLSAPSHWMLDKMGGVWAPRPSTGPHKLRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNEIFRLLYDIKGRFVLHLITKAEGAYKLCKVKRQQTGQKGVPYIATHDARTIRYPDPLIKVDDTVRINIDTGKIEDILKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKNKGLRKSIIEEQESRIKSK 259
M RGPKKH+KRL+AP HWML K+GG+WAPRPS+GPHKLRE LPL LILRNRLKYALN REA AI+MQRL+KVDGKVRTDKTFPAGFMDVI ++RTNE FRLLYD+KGRF LH IT EG YKLC+VKR Q G +G+PYIATHD RTIRYPDP IK +DTV ++++TGK+ D LKFEVGNLCMITGGHNIGRVG+IQ REKHPGS EI+ VRDA G +FAT+ NVF+IGKG++ +SLPK KG+R SI+EEQE +K +
Sbjct: 1 MPRGPKKHMKRLAAPKHWMLSKLGGIWAPRPSSGPHKLRESLPLLLILRNRLKYALNNREAVAILMQRLVKVDGKVRTDKTFPAGFMDVIELERTNETFRLLYDVKGRFRLHRITPEEGKYKLCRVKRAQMGVRGIPYIATHDGRTIRYPDPAIKHNDTVVLDLETGKVTDFLKFEVGNLCMITGGHNIGRVGLIQHREKHPGSTEIIHVRDARGQEFATQLNNVFVIGKGNQPFVSLPKGKGIRFSILEEQEKMMKER 259
BLAST of Gcaud7978.t1 vs. uniprot
Match: A0A7S3DCZ2_9EUKA (40S ribosomal protein S4 n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DCZ2_9EUKA) HSP 1 Score: 396 bits (1018), Expect = 1.380e-137 Identity = 186/255 (72.94%), Postives = 219/255 (85.88%), Query Frame = 0
Query: 1 MARGPKKHLKRLSAPSHWMLDKMGGVWAPRPSTGPHKLRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNEIFRLLYDIKGRFVLHLITKAEGAYKLCKVKRQQTGQKGVPYIATHDARTIRYPDPLIKVDDTVRINIDTGKIEDILKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKNKGLRKSIIEEQESR 255
M RGPKKH+KRL+AP HWMLDKMGGV+APRPS GPHKLRE LPL L+LRNRLKYALNG E N I+MQRL++VDGKVRTDKTFPAGFMDVITI++TNE FRLL+D+KGRF+LH I+ E YKLCKVKR + GQKG P + THD RTIRYP P IKV+DTVR++I+TGKI D +KFE GNL M+TGGHN+GRVG I+ RE+HPGS +I+ V+DAAGH FATR TNVF+IGKG++ A+SLP+NKG+R SIIEEQ R
Sbjct: 1 MPRGPKKHMKRLNAPKHWMLDKMGGVFAPRPSAGPHKLRESLPLILLLRNRLKYALNGTEVNTILMQRLVQVDGKVRTDKTFPAGFMDVITIEKTNERFRLLFDVKGRFILHRISNDEAKYKLCKVKRDELGQKGAPLVVTHDGRTIRYPHPDIKVNDTVRVDIETGKIIDFIKFETGNLVMVTGGHNLGRVGTIEHRERHPGSFDIIHVKDAAGHKFATRLTNVFVIGKGNKPAVSLPRNKGVRLSIIEEQSRR 255
BLAST of Gcaud7978.t1 vs. uniprot
Match: A0A7S2ZET9_9RHOD (40S ribosomal protein S4 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZET9_9RHOD) HSP 1 Score: 392 bits (1008), Expect = 5.310e-136 Identity = 191/255 (74.90%), Postives = 214/255 (83.92%), Query Frame = 0
Query: 1 MARGPKKHLKRLSAPSHWMLDKMGGVWAPRPSTGPHKLRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNEIFRLLYDIKGRFVLHLITKAEGAYKLCKVKRQQTGQKGVPYIATHDARTIRYPDPLIKVDDTVRINIDTGKIEDILKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKNKGLRKSIIEEQESR 255
MARG KKH+KRL+AP HWMLDK+ G++APRPS GPHKLRECLPL +ILRNRLKYALNG EAN IV QRL+KVDGKVRTD TFP+GFMDVI I+RTNE FRLLYD+KGRF LH IT E YKLCKV R Q G VPYIATHD R IRYPDPLIKVDDTV I+I+TGK+ D K+++GNL M+TGGHNIGRVG I REKHPGS EIVR+RDA GHDFATRK NVFIIGKG+ ISLPK KG++K+IIEE E+R
Sbjct: 1 MARGQKKHMKRLAAPKHWMLDKLTGIFAPRPSPGPHKLRECLPLVIILRNRLKYALNGAEANQIVKQRLLKVDGKVRTDVTFPSGFMDVIHIERTNETFRLLYDVKGRFKLHRITTEEAKYKLCKVNRAQLGPNSVPYIATHDGRYIRYPDPLIKVDDTVMIDINTGKVIDFAKYDLGNLVMVTGGHNIGRVGTIVTREKHPGSTEIVRIRDANGHDFATRKGNVFIIGKGTTPLISLPKEKGIKKTIIEEFEAR 255
BLAST of Gcaud7978.t1 vs. uniprot
Match: A0A5J4YM28_PORPP (40S ribosomal protein S4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YM28_PORPP) HSP 1 Score: 391 bits (1004), Expect = 2.240e-135 Identity = 179/253 (70.75%), Postives = 219/253 (86.56%), Query Frame = 0
Query: 3 RGPKKHLKRLSAPSHWMLDKMGGVWAPRPSTGPHKLRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNEIFRLLYDIKGRFVLHLITKAEGAYKLCKVKRQQTGQKGVPYIATHDARTIRYPDPLIKVDDTVRINIDTGKIEDILKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKNKGLRKSIIEEQESR 255
RGPKKHLKRL+AP+HWMLDK+ GVWAP+PS+GPHK RECLPL +ILRNRLKYALNGRE IVMQRL+KVDGKVRTD+ +PAGFMDV+++++TNEIFRLLYD+KGRFVLH I E YKLCKV RQ+ G +G+PYIATHD+RTIR+PDPLIKV D+VR++I+TGKI D +KFEVGNLCM T GHN GRVG I EKHPGS E+++++DAAGH F TRK+NVF+IGKG++ +SLPK+KG++KS+I QE +
Sbjct: 4 RGPKKHLKRLAAPNHWMLDKLTGVWAPKPSSGPHKTRECLPLMIILRNRLKYALNGREVMQIVMQRLVKVDGKVRTDRCYPAGFMDVVSLEKTNEIFRLLYDVKGRFVLHRIGAEEAKYKLCKVTRQEKGPRGIPYIATHDSRTIRFPDPLIKVADSVRVDIETGKIIDFIKFEVGNLCMTTAGHNQGRVGTIMGTEKHPGSFEMIKIQDAAGHVFVTRKSNVFVIGKGAQPIVSLPKDKGIKKSVISVQEEK 256
BLAST of Gcaud7978.t1 vs. uniprot
Match: A0A7J7IFP1_9RHOD (40S ribosomal protein S4 n=3 Tax=cellular organisms TaxID=131567 RepID=A0A7J7IFP1_9RHOD) HSP 1 Score: 386 bits (992), Expect = 1.210e-133 Identity = 181/255 (70.98%), Postives = 219/255 (85.88%), Query Frame = 0
Query: 1 MARGPKKHLKRLSAPSHWMLDKMGGVWAPRPSTGPHKLRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNEIFRLLYDIKGRFVLHLITKAEGAYKLCKVKRQQTGQKGVPYIATHDARTIRYPDPLIKVDDTVRINIDTGKIEDILKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKNKGLRKSIIEEQESR 255
MARGPKKHLKRL+AP HWML K+GG+WAPRPS GPHKLRECLPL +ILRNRLKYAL GREA I+MQRL++VDGKVRTD+TFPAGFMDVI I++TNE FRLLYD KGRFVLH IT EG YKLC++KRQQ G +G+PYI THD RTIRYPDPLI+V DTV ++I+TGKI + +KF+VG LCMITGGHNIGRVG++Q REKHPG+ EIV +RDAAG +FAT+ +NVF+IG+ + +SLP+ KG++ ++ EE+E R
Sbjct: 1 MARGPKKHLKRLAAPRHWMLAKLGGIWAPRPSAGPHKLRECLPLIIILRNRLKYALTGREAIQILMQRLVRVDGKVRTDRTFPAGFMDVIRIEKTNETFRLLYDTKGRFVLHRITPEEGKYKLCRIKRQQLGARGIPYIVTHDGRTIRYPDPLIRVHDTVVLDIETGKITEFVKFDVGALCMITGGHNIGRVGVVQHREKHPGATEIVHLRDAAGREFATKISNVFVIGR-DKPLVSLPRGKGVKLTVQEERERR 254
BLAST of Gcaud7978.t1 vs. uniprot
Match: RS4_BOMMO (40S ribosomal protein S4 n=42 Tax=cellular organisms TaxID=131567 RepID=RS4_BOMMO) HSP 1 Score: 380 bits (977), Expect = 2.880e-131 Identity = 180/259 (69.50%), Postives = 215/259 (83.01%), Query Frame = 0
Query: 1 MARGPKKHLKRLSAPSHWMLDKMGGVWAPRPSTGPHKLRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNEIFRLLYDIKGRFVLHLITKAEGAYKLCKVKRQQTGQKGVPYIATHDARTIRYPDPLIKVDDTVRINIDTGKIEDILKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKNKGLRKSIIEEQESRIKSK 259
MARGPKKHLKRL+AP WMLDK+GGV+APRPSTGPHKLRECLPL + LRNRLKYAL G E IV QRLIKVDGKVRTD T+PAGFMDV++I++TNE+FRL+YD+KGRF +H IT E YKLCKVKR TG K VPY+ THD RTIRYPDPLIKV+D+++++I T KI D +KFE GNLCMITGG N+GRVG I RE+HPGS +IV ++D+ GH FATR NVFIIGKG++A ISLP+ KG+R +I EE++ RI +K
Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAAK 259
BLAST of Gcaud7978.t1 vs. uniprot
Match: A0A164Q880_9CRUS (40S ribosomal protein S4 n=2 Tax=Daphnia TaxID=6668 RepID=A0A164Q880_9CRUS) HSP 1 Score: 379 bits (973), Expect = 1.130e-130 Identity = 181/259 (69.88%), Postives = 214/259 (82.63%), Query Frame = 0
Query: 1 MARGPKKHLKRLSAPSHWMLDKMGGVWAPRPSTGPHKLRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNEIFRLLYDIKGRFVLHLITKAEGAYKLCKVKRQQTGQKGVPYIATHDARTIRYPDPLIKVDDTVRINIDTGKIEDILKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKNKGLRKSIIEEQESRIKSK 259
MARGPKKHLKRL+AP WMLDK+GGV+APRPSTGPHKLRE LPL + LRNRLKYALN E IVMQRLIKVDGKVRTD +PAGFMDVITID+T E FRL+YD+KGRF +H IT E YKLCKV+R Q G KG+P+I THD RTIRYPDPL+KV+DT++++I+T KI D +KF+ GNLCMITGG N+GRVG I RE+HPGS +IV V+DA GH FATR NVFIIGKGS+A ISLP++KG++ SI EE+ R+ +K
Sbjct: 1 MARGPKKHLKRLAAPKSWMLDKLGGVFAPRPSTGPHKLRESLPLVVFLRNRLKYALNNSEVTKIVMQRLIKVDGKVRTDSNYPAGFMDVITIDKTGEYFRLVYDVKGRFAIHRITAEEAKYKLCKVRRVQVGPKGIPFITTHDGRTIRYPDPLVKVNDTIQLDIETNKIMDFIKFDSGNLCMITGGRNLGRVGTIINRERHPGSFDIVHVKDALGHLFATRLNNVFIIGKGSKAYISLPRDKGVKLSIAEERNKRLAAK 259
BLAST of Gcaud7978.t1 vs. uniprot
Match: A0A1X6NKM6_PORUM (40S ribosomal protein S4 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKM6_PORUM) HSP 1 Score: 378 bits (971), Expect = 1.160e-130 Identity = 174/237 (73.42%), Postives = 213/237 (89.87%), Query Frame = 0
Query: 19 MLDKMGGVWAPRPSTGPHKLRECLPLNLILRNRLKYALNGREANAIVMQRLIKVDGKVRTDKTFPAGFMDVITIDRTNEIFRLLYDIKGRFVLHLITKAEGAYKLCKVKRQQTGQKGVPYIATHDARTIRYPDPLIKVDDTVRINIDTGKIEDILKFEVGNLCMITGGHNIGRVGIIQLREKHPGSHEIVRVRDAAGHDFATRKTNVFIIGKGSEAAISLPKNKGLRKSIIEEQESR 255
ML K+GG++APRPSTGPHKLRECLPL +ILRNRLKYALNGREA I+MQRL+KVDGKVRTD+TFPAGFMDV++I+RTNE+FRLLYD+KGRFVLH I K E AYKLCKVKRQQTG + +P++ATHD RTIRYPDP I+VDDTV I+I++GKI D++KF+VGNL M+TGGHNIGRVG++ LREKHPGS EIVR+RDA GH+FAT+KTNVFIIGKG++ +SLPK+ G++++I+E E +
Sbjct: 1 MLGKLGGIFAPRPSTGPHKLRECLPLVIILRNRLKYALNGREAMTILMQRLVKVDGKVRTDQTFPAGFMDVVSIERTNELFRLLYDVKGRFVLHRIAKEEAAYKLCKVKRQQTGPRAIPFVATHDGRTIRYPDPTIRVDDTVMIDIESGKIIDVVKFDVGNLVMVTGGHNIGRVGVMALREKHPGSTEIVRIRDADGHEFATKKTNVFIIGKGNKGLVSLPKHNGIKQTILERAEQK 237 The following BLAST results are available for this feature:
BLAST of Gcaud7978.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud7978.t1 ID=Gcaud7978.t1|Name=Gcaud7978.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=264bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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