Gcaud7892.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7892.t1
Unique NameGcaud7892.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length475
Homology
BLAST of Gcaud7892.t1 vs. uniprot
Match: A0A2V3IY08_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY08_9FLOR)

HSP 1 Score: 383 bits (983), Expect = 3.200e-115
Identity = 202/474 (42.62%), Postives = 285/474 (60.13%), Query Frame = 0
Query:    1 MKEVTSDPIIRPNLLLTPKNDPCYACGQNSKKRPTVLVHLTTAQLEKRANVDTSPLLNPFASGCPEHVKLCTDCRCSTKGWSVICNPRKYGAKSQAALVSWKRRYTPASVRKSSECYICARLAKCGREDLVPSYIPGKSPRSNLPLLELLFYDDHARAHFCSELSQRSKISEQDARDLLKELAESRFCSLHHNHTRHSKDSAARIEPSRRGVKRGYCVFRGHGCPDTSQIFRPILRPSLDSLEELEEFGELEEAIESHSGFALIAAETMGKQACGSCRYIISKGRTGTVPTVDTASLGCATDRCLVDCIFYALDNDVDKSPQSTYMRGNEAVFDKARSLRDAVVTPFSGAPNARFLPVSKVQKLRRLLHAMSISGTKHICDRTVESRIGPVLAARRVHLYALSRKCRCYALQDSLSDTLNNFMSICGDNEDYLSPRDRRKMLTDVCQRFFKQAENYRHGRWRLWDEITAIPAKL 474
            MKEV  D   +P         PC ACG+N K+RPT    L+  QL KR+ VDT  L NPF    P    LCT CR    GW+VIC+ R+YG+KS++AL +WK R +    ++ ++CYIC +L  C  +  + +       ++N  L  +L Y    +  FCSELS+RS +  +D R LL ++ E RFCSLHHN TRH+ D AA  EP+ RG   GYC+F+G GC   S + RP+    +++LE+ E F E ++A++ +SG +L   +  GK ACG+CRYI+++G  G  P+ DT +L  ATDRCLVDCI +ALD     +  + +MRGN+ +   A  LR A + PFS AP +RFLP+  V   R+ L A+S +G   + +RTVESRIG VL+A+ VHLY+LSRK RCYA   +L   +   M++       ++ +++RKML +   RF +  E Y  G W L DEI A+P +L
Sbjct:    1 MKEVVRDSWNQPT------EGPCVACGENDKRRPTKASFLSRTQLLKRSQVDTGTLPNPFVRKDPGFFLLCTSCRSPKNGWNVICDVRRYGSKSRSALQAWKVRASAREAKQRTDCYICIKLG-CHFDSSIRT-------KANFKLFSVLLYSACVQELFCSELSRRSGLCVEDGRFLLHQIGEVRFCSLHHNQTRHANDIAATEEPTLRGALSGYCIFKGQGCSGLSAVLRPLPNLKMETLEDTEVFCEYDDAVDIYSGGSLKFEDVAGKHACGNCRYIVTRGAQGIQPSFDTVTLTDATDRCLVDCILFALDK---AACNTVFMRGNDGITHAANDLRSAAIAPFSEAPASRFLPIKAVFTTRKALAALSTNGFD-VTNRTVESRIGSVLSAKDVHLYSLSRKFRCYAQVGALCPIVGVVMTLTKGESVTITLKEKRKMLAETGNRFMRSKEKYYRGDWSLSDEIAAVPPRL 456          
BLAST of Gcaud7892.t1 vs. uniprot
Match: A0A2V3IJH2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJH2_9FLOR)

HSP 1 Score: 238 bits (606), Expect = 3.230e-67
Identity = 120/265 (45.28%), Postives = 167/265 (63.02%), Query Frame = 0
Query:  210 RGVKRGYCVFRGHGCPDTSQIFRPILRPSLDSLEELEEFGELEEAIESHSGFALIAAETMGKQACGSCRYIISKGRTGTVPTVDTASLGCATDRCLVDCIFYALDNDVDKSPQSTYMRGNEAVFDKARSLRDAVVTPFSGAPNARFLPVSKVQKLRRLLHAMSISGTKHICDRTVESRIGPVLAARRVHLYALSRKCRCYALQDSLSDTLNNFMSICGDNEDYLSPRDRRKMLTDVCQRFFKQAENYRHGRWRLWDEITAIPAKL 474
            RG+K G+CVFR  G   +S I     R   +SL+ LE++ E   A+ SHS   L A + +GK +CG+CRY+++KG  GT    DTA L  ATDRCLVDCI +ALD    +   S ++R N  + D A +LR +V+ PF   P ARFLPV  +  +R  LH  ++ G +  CD+ VESRI PVLAAR++HLY+LSRK RCYA Q++ S ++N  M I   +E  L P  RR++L+ V  RF  +++ +R+G W L +E+ AIP KL
Sbjct:    7 RGMKEGFCVFRSRGFSFSSNILHLFPRFDNNSLQGLEDYDEFNSAVLSHSSGELCAQDVIGKHSCGTCRYLLTKGSQGTQFRTDTALLRWATDRCLVDCILFALDESTSRQHISAFLRFNSDIADSAGTLRASVLAPFHNLPFARFLPVKTLIGIRCALHERNLEGKRDFCDKNVESRIAPVLAARKMHLYSLSRKLRCYATQEAFSQSINGLMGISESDEVTLMPIKRRELLSAVDTRFLAKSKVFRNGSWLLSEEVQAIPQKL 271          
The following BLAST results are available for this feature:
BLAST of Gcaud7892.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IY08_9FLOR3.200e-11542.62Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IJH2_9FLOR3.230e-6745.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1851_length_8084_cov_4.360315contigNODE_1851_length_8084_cov_4.360315:5330..6754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7892.t1Gcaud7892.t1Gracilaria caudata M_176_S67 malemRNANODE_1851_length_8084_cov_4.360315 5330..6754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7892.t1 ID=Gcaud7892.t1|Name=Gcaud7892.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=475bp
MKEVTSDPIIRPNLLLTPKNDPCYACGQNSKKRPTVLVHLTTAQLEKRAN
VDTSPLLNPFASGCPEHVKLCTDCRCSTKGWSVICNPRKYGAKSQAALVS
WKRRYTPASVRKSSECYICARLAKCGREDLVPSYIPGKSPRSNLPLLELL
FYDDHARAHFCSELSQRSKISEQDARDLLKELAESRFCSLHHNHTRHSKD
SAARIEPSRRGVKRGYCVFRGHGCPDTSQIFRPILRPSLDSLEELEEFGE
LEEAIESHSGFALIAAETMGKQACGSCRYIISKGRTGTVPTVDTASLGCA
TDRCLVDCIFYALDNDVDKSPQSTYMRGNEAVFDKARSLRDAVVTPFSGA
PNARFLPVSKVQKLRRLLHAMSISGTKHICDRTVESRIGPVLAARRVHLY
ALSRKCRCYALQDSLSDTLNNFMSICGDNEDYLSPRDRRKMLTDVCQRFF
KQAENYRHGRWRLWDEITAIPAKL*
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