Gcaud7888.t1 (polypeptide) Gracilaria caudata M_176_S67 male
|
Overview
Homology
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A2V3IIS9_9FLOR (tRNA pseudouridine(55) synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIS9_9FLOR) HSP 1 Score: 350 bits (899), Expect = 7.460e-115 Identity = 194/348 (55.75%), Postives = 248/348 (71.26%), Query Frame = 0
Query: 2 RDALRAALRPLMMPL-RYDAEAEVVFRLFYEHRETAGEGDFLRESCGGVGGGSGAGKRARADV-SITAAQKVLDGMSDKEFEVAAPHLMQLPPVAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNMQNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVMNEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEISQAS 347
RDALR ++ PL+ L R+ +A ++ L Y+ R A + FL A KR R V SITAAQK+L +SD EF VAA HL LP V PVS++ V +VP+LLAARYTKLSRV+SQTPWNV + N RV SVQ+ R+ +L+++ATFTAGGREDVDVRMLG GRPF+++L + VVP L+ R++D + A + VVR+H LRVV ++Y KMR+YEA+K+KHYRCV+YT G+LD+ L+ L ++++ + Q+TPLRVLHRRTQ R K I V R++N HFVVLDV+AQAGTYIKEFVHGDNGRT+PS+ASLL CF DIVQLDVT+IS S
Sbjct: 142 RDALRLSIAPLLRALGRFCPDAPLLVTLKYDARCCASDAAFLPHL---ERAALPAAKRPRTPVPSITAAQKLLLELSDHEFAVAAQHLFPLPRVEHPVSIAASVASVPVLLAARYTKLSRVLSQTPWNVLRA-AGNARVATSVQAAVERALRKHLLYQKATFTAGGREDVDVRMLGGGRPFIVQLHQSAVVPCLISQRLLDHVAAELQHHVVRLHHLRVVDASYVHKMREYEADKQKHYRCVVYTTGILDQQALRKLQLRDLQLMQKTPLRVLHRRTQMTRPKRIARVDVVRLINPHFVVLDVVAQAGTYIKEFVHGDNGRTTPSIASLLHCFVDIVQLDVTDISHTS 485
BLAST of Gcaud7888.t1 vs. uniprot
Match: R7QGX4_CHOCR (tRNA pseudouridine(55) synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGX4_CHOCR) HSP 1 Score: 254 bits (650), Expect = 1.660e-77 Identity = 152/354 (42.94%), Postives = 208/354 (58.76%), Query Frame = 0
Query: 16 LRYDAEAEVVFRLFYEHRETAGEGDFLRESCGGVGGGSGAGKRARADVSITAAQKVLDGMSDKEF-EVAAPHLMQLPPVAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNG--------------------RVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDD---IVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQ-LLNMQN-VSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVMNEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
+RY +A++ L + H + + F+ +R + DVS TA + M+D++F E P PP+ QP V+V V P+L A RY KLSRVVSQTPW V + +G R E SV+ R+V+ ++ATFTAGGREDVDVRMLG GRPFV+E+ +VP+L++ M++ + A + VV + R+V YFA+MR +E EK+K YRCV++T + L+ L +Q + Q+TPLRVLHRRTQAVR + IF + RV++ +F V+DV+A AGTYIKEFVHGD+GRT P+VA LL C ADIVQLDVT+I
Sbjct: 127 MRYHPDAQLFVDLSFSHTPSNSDAAFVHTDPANPHKR----RRLQNDVSATAVVRAAAAMTDQQFVETMGPRFFPPPPIEQPAEVAVSVYVAPVLFAGRYNKLSRVVSQTPWFVDAPPAASGLAAIARANEGKVTDQYGRRKRTELSVEDAATAGIREVLNPDKATFTAGGREDVDVRMLGKGRPFVVEVINPKIVPALIEEEMVERMRALAASVSSSVV-IRDFRMVSKEYFAQMRSFEMEKKKCYRCVVWTRREVGSEELKDKLEVQGGFMLRQKTPLRVLHRRTQAVRERCIFEARLTRVVSPNFFVMDVVAAAGTYIKEFVHGDHGRTLPNVAQLLDCDADIVQLDVTDI 475
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A2T7CYW3_9POAL (tRNA pseudouridine(55) synthase n=5 Tax=Panicum hallii TaxID=206008 RepID=A0A2T7CYW3_9POAL) HSP 1 Score: 191 bits (486), Expect = 4.780e-53 Identity = 111/278 (39.93%), Postives = 172/278 (61.87%), Query Frame = 0
Query: 70 KVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNM-QNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVMN-EHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
K L+ M D+EF +L+QLPP V++P + + P+ + RY KLSR VSQ+ W + R E SV+ + R + + F A GRED+DVRMLG GRPF++EL +PS ++ + I+D + + VRV L++V + + MR+ EAEK+K Y +I+T L E++L +++ +++ I Q+TP+RVLHRR+ R ++I +++V N ++ +L + QAGTYIKEFVHGD GRT PS+ ++L C A+I+QLDVT++
Sbjct: 229 KTLESMHDQEF----CNLIQLPPEKVSKPCHLVISCLRSPIYIGGRYLKLSRNVSQSCWIIDDERMG----EASVEEIIGENVRAICRGDSCKFHAAGREDIDVRMLGSGRPFLVELLNVRSIPSEIEVQQIEDRINNSEKKYVRVRNLKLVGNEIWTMMREGEAEKQKQYAALIWTSRELAENDLHNISVTKDMEIVQKTPIRVLHRRSPLERKRIIHWMQIEKVTNGSNYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGAILGCRAEILQLDVTDV 498
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A2T7CYL8_9POAL (tRNA pseudouridine(55) synthase n=7 Tax=Panicum TaxID=4539 RepID=A0A2T7CYL8_9POAL) HSP 1 Score: 191 bits (486), Expect = 9.230e-53 Identity = 111/278 (39.93%), Postives = 172/278 (61.87%), Query Frame = 0
Query: 70 KVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNM-QNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVMN-EHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
K L+ M D+EF +L+QLPP V++P + + P+ + RY KLSR VSQ+ W + R E SV+ + R + + F A GRED+DVRMLG GRPF++EL +PS ++ + I+D + + VRV L++V + + MR+ EAEK+K Y +I+T L E++L +++ +++ I Q+TP+RVLHRR+ R ++I +++V N ++ +L + QAGTYIKEFVHGD GRT PS+ ++L C A+I+QLDVT++
Sbjct: 263 KTLESMHDQEF----CNLIQLPPEKVSKPCHLVISCLRSPIYIGGRYLKLSRNVSQSCWIIDDERMG----EASVEEIIGENVRAICRGDSCKFHAAGREDIDVRMLGSGRPFLVELLNVRSIPSEIEVQQIEDRINNSEKKYVRVRNLKLVGNEIWTMMREGEAEKQKQYAALIWTSRELAENDLHNISVTKDMEIVQKTPIRVLHRRSPLERKRIIHWMQIEKVTNGSNYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGAILGCRAEILQLDVTDV 532
BLAST of Gcaud7888.t1 vs. uniprot
Match: UPI0009E36CF4 (putative tRNA pseudouridine synthase Pus10 isoform X7 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E36CF4) HSP 1 Score: 187 bits (476), Expect = 1.130e-52 Identity = 113/284 (39.79%), Postives = 169/284 (59.51%), Query Frame = 0
Query: 64 SITAAQKVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLN-MQNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
S A+ K L+G+ D F L +LPP V+ P + + +P+ + RY K SR VSQT W + R E SV+ + ++ + F A GRED+DVRMLG GRPF++EL A +PS+VD I + D V V L+VV S + MR EAEK+K Y +++ L + +LQ+++ + N+ I+Q TP+RVLHRR+ R ++I +++++ ++ F +L + QAGTYIKEFVHGD GRTSP++ S+L C A+I+QLDVT++
Sbjct: 110 SDAASLKELNGLEDHIF----CELFELPPKKVSNPGRLLISCYRMPMFIGGRYLKFSRKVSQTRWIIEDERMG----EASVEEIVGTHALEICRADSYKFHAAGREDIDVRMLGSGRPFLVELSNARCLPSMVDVLQIAVKINSSDKKYVMVRNLKVVGSEAWNLMRVGEAEKQKQYAALVWISRPLMDEDLQIISSLNNMEISQSTPIRVLHRRSPLERKRIIHWMRIEKIVGSDQFFLLHLCTQAGTYIKEFVHGDLGRTSPNIGSILSCRAEILQLDVTDV 385
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A453CN26_AEGTS (tRNA pseudouridine(55) synthase n=19 Tax=Triticinae TaxID=1648030 RepID=A0A453CN26_AEGTS) HSP 1 Score: 187 bits (476), Expect = 1.320e-51 Identity = 110/278 (39.57%), Postives = 169/278 (60.79%), Query Frame = 0
Query: 70 KVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNMQN-VSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
K L+G+ DKEF L +LPP V++P + + P+ + RY KLSR VSQ+ W + R VE ++ R + F A GRED+DVRMLG GRPF++E+ +PS ++ + I D + + VR+ L++V + +A MR+ EAEK+K Y +I+T L + +LQ +++ N + I Q TP+RVLHRR+ R ++I +++V + ++ +L + QAGTYIKEFVHGD GRT+PS+ S+L+C A+I+QLDVT++
Sbjct: 227 KSLEGIQDKEF----CSLFKLPPEKVSKPCHLVISFLRSPIYIGGRYLKLSRNVSQSCWIIDDERMGEASVEEIIKESVCAISRG----DGYKFHAAGREDIDVRMLGSGRPFLIEVLNVRSIPSAIEIQQISDKINSSEKKHVRIRNLKLVDNEIWAMMREGEAEKQKQYAALIWTSSPLTDDDLQKISVINDMEIVQNTPIRVLHRRSPLERKRIIHWMEIEKVEGSSNYYLLHLCTQAGTYIKEFVHGDLGRTNPSIGSMLRCRAEILQLDVTDV 496
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A835UU65_VANPL (tRNA pseudouridine(55) synthase n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835UU65_VANPL) HSP 1 Score: 189 bits (479), Expect = 2.090e-51 Identity = 111/278 (39.93%), Postives = 168/278 (60.43%), Query Frame = 0
Query: 70 KVLDGMSDKEFEVAAPHLMQLPPV--AQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIY-TEGVLDEHNLQLLNMQNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
K L + D+ F + H +LPP ++P ++ + + RY K SR VSQT W + R E SV+ + ++ + F A GRED+DVRMLG GRPF++E+ A +PS+VD I + + D G V+V L +V S + MR+ EAEK+K Y +++ + VLDE + + +++N+ I+QRTP+RVLHRR+ R ++I +++++ N HF +L + QAGTYIKEFVHGD GRT PS+ S+L+C A+I+QLDVT +
Sbjct: 308 KALSTLDDQTFSM---HF-ELPPTKASKPCQLTTTCYRKAIYIGGRYLKFSRKVSQTRWIIDDERMG----EASVEEIVGIPALELCRGDSYKFHAAGREDIDVRMLGSGRPFLVEVSNARQLPSMVDVLQIAEKINSSDKGYVKVRNLEMVGSEVWNLMREGEAEKQKQYAALVWISRPVLDEDLMTISSIENMEISQRTPVRVLHRRSPLERKRIIHWMKIEKIVGNNHFFLLHLCTQAGTYIKEFVHGDLGRTYPSIGSILECRAEILQLDVTAV 577
BLAST of Gcaud7888.t1 vs. uniprot
Match: UPI0009E58675 (putative tRNA pseudouridine synthase Pus10 isoform X1 n=6 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E58675) HSP 1 Score: 187 bits (476), Expect = 3.240e-51 Identity = 113/284 (39.79%), Postives = 169/284 (59.51%), Query Frame = 0
Query: 64 SITAAQKVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLN-MQNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
S A+ K L+G+ D F L +LPP V+ P + + +P+ + RY K SR VSQT W + R E SV+ + ++ + F A GRED+DVRMLG GRPF++EL A +PS+VD I + D V V L+VV S + MR EAEK+K Y +++ L + +LQ+++ + N+ I+Q TP+RVLHRR+ R ++I +++++ ++ F +L + QAGTYIKEFVHGD GRTSP++ S+L C A+I+QLDVT++
Sbjct: 269 SDAASLKELNGLEDHIF----CELFELPPKKVSNPGRLLISCYRMPMFIGGRYLKFSRKVSQTRWIIEDERMG----EASVEEIVGTHALEICRADSYKFHAAGREDIDVRMLGSGRPFLVELSNARCLPSMVDVLQIAVKINSSDKKYVMVRNLKVVGSEAWNLMRVGEAEKQKQYAALVWISRPLMDEDLQIISSLNNMEISQSTPIRVLHRRSPLERKRIIHWMRIEKIVGSDQFFLLHLCTQAGTYIKEFVHGDLGRTSPNIGSILSCRAEILQLDVTDV 544
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A3B6DI19_WHEAT (tRNA pseudouridine(55) synthase n=7 Tax=Triticeae TaxID=147389 RepID=A0A3B6DI19_WHEAT) HSP 1 Score: 187 bits (474), Expect = 5.570e-51 Identity = 110/278 (39.57%), Postives = 168/278 (60.43%), Query Frame = 0
Query: 70 KVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNMQN-VSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
K L G+ DKEF L +LPP V++P + + P+ + RY KLSR VSQ+ W + R VE ++ R + F A GRED+DVRMLG GRPF++E+ +PS ++ + I D + + VR+ L++V + +A MR+ EAEK+K Y +I+T L + +LQ +++ N + I Q TP+RVLHRR+ R ++I +++V + ++ +L + QAGTYIKEFVHGD GRT+PS+ S+L+C A+I+QLDVT++
Sbjct: 268 KSLQGIQDKEF----CSLFKLPPEKVSKPCHLVISFLRSPIYIGGRYLKLSRNVSQSCWIIDDERMGEASVEEIIKESVCAISRG----DGYKFHAAGREDIDVRMLGSGRPFLIEVLNVRSIPSAIEIQQISDKINSSEKKHVRIRNLKLVDNEIWAMMREGEAEKQKQYAALIWTSSPLTDDDLQKISVINDMEIVQNTPIRVLHRRSPLERKRIIHWMEIEKVEGSSNYYLLHLCTQAGTYIKEFVHGDLGRTNPSIGSMLRCRAEILQLDVTDV 537
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A3B6DL61_WHEAT (tRNA pseudouridine(55) synthase n=2 Tax=Triticinae TaxID=1648030 RepID=A0A3B6DL61_WHEAT) HSP 1 Score: 187 bits (474), Expect = 6.190e-51 Identity = 110/278 (39.57%), Postives = 168/278 (60.43%), Query Frame = 0
Query: 70 KVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNMQN-VSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
K L G+ DKEF L +LPP V++P + + P+ + RY KLSR VSQ+ W + R VE ++ R + F A GRED+DVRMLG GRPF++E+ +PS ++ + I D + + VR+ L++V + +A MR+ EAEK+K Y +I+T L + +LQ +++ N + I Q TP+RVLHRR+ R ++I +++V + ++ +L + QAGTYIKEFVHGD GRT+PS+ S+L+C A+I+QLDVT++
Sbjct: 274 KSLQGIQDKEF----CSLFKLPPEKVSKPCHLVISFLRSPIYIGGRYLKLSRNVSQSCWIIDDERMGEASVEEIIKESVCAISRG----DGYKFHAAGREDIDVRMLGSGRPFLIEVLNVRSIPSAIEIQQISDKINSSEKKHVRIRNLKLVDNEIWAMMREGEAEKQKQYAALIWTSSPLTDDDLQKISVINDMEIVQNTPIRVLHRRSPLERKRIIHWMEIEKVEGSSNYYLLHLCTQAGTYIKEFVHGDLGRTNPSIGSMLRCRAEILQLDVTDV 543 The following BLAST results are available for this feature:
BLAST of Gcaud7888.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud7888.t1 ID=Gcaud7888.t1|Name=Gcaud7888.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=348bpback to top |