Gcaud7888.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7888.t1
Unique NameGcaud7888.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length348
Homology
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A2V3IIS9_9FLOR (tRNA pseudouridine(55) synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIS9_9FLOR)

HSP 1 Score: 350 bits (899), Expect = 7.460e-115
Identity = 194/348 (55.75%), Postives = 248/348 (71.26%), Query Frame = 0
Query:    2 RDALRAALRPLMMPL-RYDAEAEVVFRLFYEHRETAGEGDFLRESCGGVGGGSGAGKRARADV-SITAAQKVLDGMSDKEFEVAAPHLMQLPPVAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNMQNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVMNEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEISQAS 347
            RDALR ++ PL+  L R+  +A ++  L Y+ R  A +  FL            A KR R  V SITAAQK+L  +SD EF VAA HL  LP V  PVS++  V +VP+LLAARYTKLSRV+SQTPWNV  +   N RV  SVQ+      R+ +L+++ATFTAGGREDVDVRMLG GRPF+++L  + VVP L+  R++D + A +   VVR+H LRVV ++Y  KMR+YEA+K+KHYRCV+YT G+LD+  L+ L ++++ + Q+TPLRVLHRRTQ  R K I    V R++N HFVVLDV+AQAGTYIKEFVHGDNGRT+PS+ASLL CF DIVQLDVT+IS  S
Sbjct:  142 RDALRLSIAPLLRALGRFCPDAPLLVTLKYDARCCASDAAFLPHL---ERAALPAAKRPRTPVPSITAAQKLLLELSDHEFAVAAQHLFPLPRVEHPVSIAASVASVPVLLAARYTKLSRVLSQTPWNVLRA-AGNARVATSVQAAVERALRKHLLYQKATFTAGGREDVDVRMLGGGRPFIVQLHQSAVVPCLISQRLLDHVAAELQHHVVRLHHLRVVDASYVHKMREYEADKQKHYRCVVYTTGILDQQALRKLQLRDLQLMQKTPLRVLHRRTQMTRPKRIARVDVVRLINPHFVVLDVVAQAGTYIKEFVHGDNGRTTPSIASLLHCFVDIVQLDVTDISHTS 485          
BLAST of Gcaud7888.t1 vs. uniprot
Match: R7QGX4_CHOCR (tRNA pseudouridine(55) synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGX4_CHOCR)

HSP 1 Score: 254 bits (650), Expect = 1.660e-77
Identity = 152/354 (42.94%), Postives = 208/354 (58.76%), Query Frame = 0
Query:   16 LRYDAEAEVVFRLFYEHRETAGEGDFLRESCGGVGGGSGAGKRARADVSITAAQKVLDGMSDKEF-EVAAPHLMQLPPVAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNG--------------------RVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDD---IVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQ-LLNMQN-VSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVMNEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
            +RY  +A++   L + H  +  +  F+              +R + DVS TA  +    M+D++F E   P     PP+ QP  V+V V   P+L A RY KLSRVVSQTPW V +    +G                    R E SV+       R+V+  ++ATFTAGGREDVDVRMLG GRPFV+E+    +VP+L++  M++    + A +   VV +   R+V   YFA+MR +E EK+K YRCV++T   +    L+  L +Q    + Q+TPLRVLHRRTQAVR + IF   + RV++ +F V+DV+A AGTYIKEFVHGD+GRT P+VA LL C ADIVQLDVT+I
Sbjct:  127 MRYHPDAQLFVDLSFSHTPSNSDAAFVHTDPANPHKR----RRLQNDVSATAVVRAAAAMTDQQFVETMGPRFFPPPPIEQPAEVAVSVYVAPVLFAGRYNKLSRVVSQTPWFVDAPPAASGLAAIARANEGKVTDQYGRRKRTELSVEDAATAGIREVLNPDKATFTAGGREDVDVRMLGKGRPFVVEVINPKIVPALIEEEMVERMRALAASVSSSVV-IRDFRMVSKEYFAQMRSFEMEKKKCYRCVVWTRREVGSEELKDKLEVQGGFMLRQKTPLRVLHRRTQAVRERCIFEARLTRVVSPNFFVMDVVAAAGTYIKEFVHGDHGRTLPNVAQLLDCDADIVQLDVTDI 475          
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A2T7CYW3_9POAL (tRNA pseudouridine(55) synthase n=5 Tax=Panicum hallii TaxID=206008 RepID=A0A2T7CYW3_9POAL)

HSP 1 Score: 191 bits (486), Expect = 4.780e-53
Identity = 111/278 (39.93%), Postives = 172/278 (61.87%), Query Frame = 0
Query:   70 KVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNM-QNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVMN-EHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
            K L+ M D+EF     +L+QLPP  V++P  + +     P+ +  RY KLSR VSQ+ W +   R      E SV+ +     R +   +   F A GRED+DVRMLG GRPF++EL     +PS ++ + I+D +   +   VRV  L++V +  +  MR+ EAEK+K Y  +I+T   L E++L  +++ +++ I Q+TP+RVLHRR+   R ++I    +++V N  ++ +L +  QAGTYIKEFVHGD GRT PS+ ++L C A+I+QLDVT++
Sbjct:  229 KTLESMHDQEF----CNLIQLPPEKVSKPCHLVISCLRSPIYIGGRYLKLSRNVSQSCWIIDDERMG----EASVEEIIGENVRAICRGDSCKFHAAGREDIDVRMLGSGRPFLVELLNVRSIPSEIEVQQIEDRINNSEKKYVRVRNLKLVGNEIWTMMREGEAEKQKQYAALIWTSRELAENDLHNISVTKDMEIVQKTPIRVLHRRSPLERKRIIHWMQIEKVTNGSNYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGAILGCRAEILQLDVTDV 498          
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A2T7CYL8_9POAL (tRNA pseudouridine(55) synthase n=7 Tax=Panicum TaxID=4539 RepID=A0A2T7CYL8_9POAL)

HSP 1 Score: 191 bits (486), Expect = 9.230e-53
Identity = 111/278 (39.93%), Postives = 172/278 (61.87%), Query Frame = 0
Query:   70 KVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNM-QNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVMN-EHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
            K L+ M D+EF     +L+QLPP  V++P  + +     P+ +  RY KLSR VSQ+ W +   R      E SV+ +     R +   +   F A GRED+DVRMLG GRPF++EL     +PS ++ + I+D +   +   VRV  L++V +  +  MR+ EAEK+K Y  +I+T   L E++L  +++ +++ I Q+TP+RVLHRR+   R ++I    +++V N  ++ +L +  QAGTYIKEFVHGD GRT PS+ ++L C A+I+QLDVT++
Sbjct:  263 KTLESMHDQEF----CNLIQLPPEKVSKPCHLVISCLRSPIYIGGRYLKLSRNVSQSCWIIDDERMG----EASVEEIIGENVRAICRGDSCKFHAAGREDIDVRMLGSGRPFLVELLNVRSIPSEIEVQQIEDRINNSEKKYVRVRNLKLVGNEIWTMMREGEAEKQKQYAALIWTSRELAENDLHNISVTKDMEIVQKTPIRVLHRRSPLERKRIIHWMQIEKVTNGSNYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGAILGCRAEILQLDVTDV 532          
BLAST of Gcaud7888.t1 vs. uniprot
Match: UPI0009E36CF4 (putative tRNA pseudouridine synthase Pus10 isoform X7 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E36CF4)

HSP 1 Score: 187 bits (476), Expect = 1.130e-52
Identity = 113/284 (39.79%), Postives = 169/284 (59.51%), Query Frame = 0
Query:   64 SITAAQKVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLN-MQNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
            S  A+ K L+G+ D  F      L +LPP  V+ P  + +    +P+ +  RY K SR VSQT W +   R      E SV+ +      ++   +   F A GRED+DVRMLG GRPF++EL  A  +PS+VD   I   +   D   V V  L+VV S  +  MR  EAEK+K Y  +++    L + +LQ+++ + N+ I+Q TP+RVLHRR+   R ++I    +++++ ++ F +L +  QAGTYIKEFVHGD GRTSP++ S+L C A+I+QLDVT++
Sbjct:  110 SDAASLKELNGLEDHIF----CELFELPPKKVSNPGRLLISCYRMPMFIGGRYLKFSRKVSQTRWIIEDERMG----EASVEEIVGTHALEICRADSYKFHAAGREDIDVRMLGSGRPFLVELSNARCLPSMVDVLQIAVKINSSDKKYVMVRNLKVVGSEAWNLMRVGEAEKQKQYAALVWISRPLMDEDLQIISSLNNMEISQSTPIRVLHRRSPLERKRIIHWMRIEKIVGSDQFFLLHLCTQAGTYIKEFVHGDLGRTSPNIGSILSCRAEILQLDVTDV 385          
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A453CN26_AEGTS (tRNA pseudouridine(55) synthase n=19 Tax=Triticinae TaxID=1648030 RepID=A0A453CN26_AEGTS)

HSP 1 Score: 187 bits (476), Expect = 1.320e-51
Identity = 110/278 (39.57%), Postives = 169/278 (60.79%), Query Frame = 0
Query:   70 KVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNMQN-VSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
            K L+G+ DKEF      L +LPP  V++P  + +     P+ +  RY KLSR VSQ+ W +   R     VE  ++       R     +   F A GRED+DVRMLG GRPF++E+     +PS ++ + I D +   +   VR+  L++V +  +A MR+ EAEK+K Y  +I+T   L + +LQ +++ N + I Q TP+RVLHRR+   R ++I    +++V  + ++ +L +  QAGTYIKEFVHGD GRT+PS+ S+L+C A+I+QLDVT++
Sbjct:  227 KSLEGIQDKEF----CSLFKLPPEKVSKPCHLVISFLRSPIYIGGRYLKLSRNVSQSCWIIDDERMGEASVEEIIKESVCAISRG----DGYKFHAAGREDIDVRMLGSGRPFLIEVLNVRSIPSAIEIQQISDKINSSEKKHVRIRNLKLVDNEIWAMMREGEAEKQKQYAALIWTSSPLTDDDLQKISVINDMEIVQNTPIRVLHRRSPLERKRIIHWMEIEKVEGSSNYYLLHLCTQAGTYIKEFVHGDLGRTNPSIGSMLRCRAEILQLDVTDV 496          
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A835UU65_VANPL (tRNA pseudouridine(55) synthase n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835UU65_VANPL)

HSP 1 Score: 189 bits (479), Expect = 2.090e-51
Identity = 111/278 (39.93%), Postives = 168/278 (60.43%), Query Frame = 0
Query:   70 KVLDGMSDKEFEVAAPHLMQLPPV--AQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIY-TEGVLDEHNLQLLNMQNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
            K L  + D+ F +   H  +LPP   ++P  ++       + +  RY K SR VSQT W +   R      E SV+ +      ++   +   F A GRED+DVRMLG GRPF++E+  A  +PS+VD   I + +   D G V+V  L +V S  +  MR+ EAEK+K Y  +++ +  VLDE  + + +++N+ I+QRTP+RVLHRR+   R ++I    +++++ N HF +L +  QAGTYIKEFVHGD GRT PS+ S+L+C A+I+QLDVT +
Sbjct:  308 KALSTLDDQTFSM---HF-ELPPTKASKPCQLTTTCYRKAIYIGGRYLKFSRKVSQTRWIIDDERMG----EASVEEIVGIPALELCRGDSYKFHAAGREDIDVRMLGSGRPFLVEVSNARQLPSMVDVLQIAEKINSSDKGYVKVRNLEMVGSEVWNLMREGEAEKQKQYAALVWISRPVLDEDLMTISSIENMEISQRTPVRVLHRRSPLERKRIIHWMKIEKIVGNNHFFLLHLCTQAGTYIKEFVHGDLGRTYPSIGSILECRAEILQLDVTAV 577          
BLAST of Gcaud7888.t1 vs. uniprot
Match: UPI0009E58675 (putative tRNA pseudouridine synthase Pus10 isoform X1 n=6 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E58675)

HSP 1 Score: 187 bits (476), Expect = 3.240e-51
Identity = 113/284 (39.79%), Postives = 169/284 (59.51%), Query Frame = 0
Query:   64 SITAAQKVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLN-MQNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
            S  A+ K L+G+ D  F      L +LPP  V+ P  + +    +P+ +  RY K SR VSQT W +   R      E SV+ +      ++   +   F A GRED+DVRMLG GRPF++EL  A  +PS+VD   I   +   D   V V  L+VV S  +  MR  EAEK+K Y  +++    L + +LQ+++ + N+ I+Q TP+RVLHRR+   R ++I    +++++ ++ F +L +  QAGTYIKEFVHGD GRTSP++ S+L C A+I+QLDVT++
Sbjct:  269 SDAASLKELNGLEDHIF----CELFELPPKKVSNPGRLLISCYRMPMFIGGRYLKFSRKVSQTRWIIEDERMG----EASVEEIVGTHALEICRADSYKFHAAGREDIDVRMLGSGRPFLVELSNARCLPSMVDVLQIAVKINSSDKKYVMVRNLKVVGSEAWNLMRVGEAEKQKQYAALVWISRPLMDEDLQIISSLNNMEISQSTPIRVLHRRSPLERKRIIHWMRIEKIVGSDQFFLLHLCTQAGTYIKEFVHGDLGRTSPNIGSILSCRAEILQLDVTDV 544          
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A3B6DI19_WHEAT (tRNA pseudouridine(55) synthase n=7 Tax=Triticeae TaxID=147389 RepID=A0A3B6DI19_WHEAT)

HSP 1 Score: 187 bits (474), Expect = 5.570e-51
Identity = 110/278 (39.57%), Postives = 168/278 (60.43%), Query Frame = 0
Query:   70 KVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNMQN-VSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
            K L G+ DKEF      L +LPP  V++P  + +     P+ +  RY KLSR VSQ+ W +   R     VE  ++       R     +   F A GRED+DVRMLG GRPF++E+     +PS ++ + I D +   +   VR+  L++V +  +A MR+ EAEK+K Y  +I+T   L + +LQ +++ N + I Q TP+RVLHRR+   R ++I    +++V  + ++ +L +  QAGTYIKEFVHGD GRT+PS+ S+L+C A+I+QLDVT++
Sbjct:  268 KSLQGIQDKEF----CSLFKLPPEKVSKPCHLVISFLRSPIYIGGRYLKLSRNVSQSCWIIDDERMGEASVEEIIKESVCAISRG----DGYKFHAAGREDIDVRMLGSGRPFLIEVLNVRSIPSAIEIQQISDKINSSEKKHVRIRNLKLVDNEIWAMMREGEAEKQKQYAALIWTSSPLTDDDLQKISVINDMEIVQNTPIRVLHRRSPLERKRIIHWMEIEKVEGSSNYYLLHLCTQAGTYIKEFVHGDLGRTNPSIGSMLRCRAEILQLDVTDV 537          
BLAST of Gcaud7888.t1 vs. uniprot
Match: A0A3B6DL61_WHEAT (tRNA pseudouridine(55) synthase n=2 Tax=Triticinae TaxID=1648030 RepID=A0A3B6DL61_WHEAT)

HSP 1 Score: 187 bits (474), Expect = 6.190e-51
Identity = 110/278 (39.57%), Postives = 168/278 (60.43%), Query Frame = 0
Query:   70 KVLDGMSDKEFEVAAPHLMQLPP--VAQPVSVSVRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVXXXXXRQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMIDDIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDEHNLQLLNMQN-VSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVM-NEHFVVLDVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEI 343
            K L G+ DKEF      L +LPP  V++P  + +     P+ +  RY KLSR VSQ+ W +   R     VE  ++       R     +   F A GRED+DVRMLG GRPF++E+     +PS ++ + I D +   +   VR+  L++V +  +A MR+ EAEK+K Y  +I+T   L + +LQ +++ N + I Q TP+RVLHRR+   R ++I    +++V  + ++ +L +  QAGTYIKEFVHGD GRT+PS+ S+L+C A+I+QLDVT++
Sbjct:  274 KSLQGIQDKEF----CSLFKLPPEKVSKPCHLVISFLRSPIYIGGRYLKLSRNVSQSCWIIDDERMGEASVEEIIKESVCAISRG----DGYKFHAAGREDIDVRMLGSGRPFLIEVLNVRSIPSAIEIQQISDKINSSEKKHVRIRNLKLVDNEIWAMMREGEAEKQKQYAALIWTSSPLTDDDLQKISVINDMEIVQNTPIRVLHRRSPLERKRIIHWMEIEKVEGSSNYYLLHLCTQAGTYIKEFVHGDLGRTNPSIGSMLRCRAEILQLDVTDV 543          
The following BLAST results are available for this feature:
BLAST of Gcaud7888.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIS9_9FLOR7.460e-11555.75tRNA pseudouridine(55) synthase n=1 Tax=Gracilario... [more]
R7QGX4_CHOCR1.660e-7742.94tRNA pseudouridine(55) synthase n=1 Tax=Chondrus c... [more]
A0A2T7CYW3_9POAL4.780e-5339.93tRNA pseudouridine(55) synthase n=5 Tax=Panicum ha... [more]
A0A2T7CYL8_9POAL9.230e-5339.93tRNA pseudouridine(55) synthase n=7 Tax=Panicum Ta... [more]
UPI0009E36CF41.130e-5239.79putative tRNA pseudouridine synthase Pus10 isoform... [more]
A0A453CN26_AEGTS1.320e-5139.57tRNA pseudouridine(55) synthase n=19 Tax=Triticina... [more]
A0A835UU65_VANPL2.090e-5139.93tRNA pseudouridine(55) synthase n=2 Tax=Vanilla pl... [more]
UPI0009E586753.240e-5139.79putative tRNA pseudouridine synthase Pus10 isoform... [more]
A0A3B6DI19_WHEAT5.570e-5139.57tRNA pseudouridine(55) synthase n=7 Tax=Triticeae ... [more]
A0A3B6DL61_WHEAT6.190e-5139.57tRNA pseudouridine(55) synthase n=2 Tax=Triticinae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.2510coord: 108..235
e-value: 1.5E-28
score: 101.4
NoneNo IPR availableGENE3D3.30.70.3190coord: 236..344
e-value: 4.5E-36
score: 124.8
IPR039894tRNA pseudouridine synthase Pus10-likePANTHERPTHR21568UNCHARACTERIZEDcoord: 64..343
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 215..343

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_465_length_24681_cov_4.375641contigNODE_465_length_24681_cov_4.375641:20337..21380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7888.t1Gcaud7888.t1Gracilaria caudata M_176_S67 malemRNANODE_465_length_24681_cov_4.375641 20337..21380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7888.t1 ID=Gcaud7888.t1|Name=Gcaud7888.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=348bp
MRDALRAALRPLMMPLRYDAEAEVVFRLFYEHRETAGEGDFLRESCGGVG
GGSGAGKRARADVSITAAQKVLDGMSDKEFEVAAPHLMQLPPVAQPVSVS
VRVETVPLLLAARYTKLSRVVSQTPWNVASSRTVNGRVERSVQSVVERAV
RQVILHERATFTAGGREDVDVRMLGDGRPFVLELQGANVVPSLVDARMID
DIVARIDGGVVRVHGLRVVPSTYFAKMRQYEAEKRKHYRCVIYTEGVLDE
HNLQLLNMQNVSIAQRTPLRVLHRRTQAVRHKMIFSTHVQRVMNEHFVVL
DVIAQAGTYIKEFVHGDNGRTSPSVASLLQCFADIVQLDVTEISQAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039894Pus10-like
IPR020103PsdUridine_synth_cat_dom_sf