Gcaud7883.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7883.t1
Unique NameGcaud7883.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length587
Homology
BLAST of Gcaud7883.t1 vs. uniprot
Match: A0A2V3IIT2_9FLOR (Prolycopene isomerase 1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIT2_9FLOR)

HSP 1 Score: 846 bits (2185), Expect = 2.280e-300
Identity = 424/589 (71.99%), Postives = 483/589 (82.00%), Query Frame = 0
Query:    1 MGILAFSSFAGVPLVD----KRLQVSHSESLSKRHLLAHASRGRVLIRSSVEDESYDVITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYGTITFESGPHLFSGLQFPSENPMYHVLRAVDAKLDVTRYDAWGVFLPNTYVRATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALRASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNFLNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAIAKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIISNVSALDVNQLLPGWKADDEKPYAKNSGGEMCPSFMHLHVALELTEDIRSRLPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAYTPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVKLVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDGVFPGVGVPAVAGSAWIVANGLVSVQEHVDLLRRNG 585
            M +LAFS    +PL       R++    + + ++    H       +++SV  +++DVITIGSGLGGLC SALLSTYNLRTLTLESHSEPGGAAHSFSRRTP+GT+TFESGPHLFSGLQ PS+NP+YHVLRAVDAKLDV  YDAWGVFLP  YVR TLRA EPLFEQLL+VAGGP AH++MRNLT ALRPLGEAA+LLPPAA+RA D  GSLRVA+R+  S +SLS +P L  LSRPF+T+LD+ VSD F+ NFLNLLCFLLAGATAER+PVAEVAFMFREWLGD AV GAPVLQRPVGGASAIAKALIEAI  RGGVVQ  SHV  V++E GRA+GV+LKSGR IRA +A+ISNVSALDV++LLP W +  +   +     EMCPSFMHLHVALELTE+++SRLP G LEPNYVSVEDW  GL+HPDNVVLISVPS LD+N+CP GH VLHAYTPATEPY  W+ L P T EY+ YKE RSQILWRAVNR+F TDIRP AY+KL+GTPRTH+RFLRRRDGSYGPKVDAR+ GLGLPFPGSG YPEGFY VGDGVFPGVGVPAVAGS+WIVANGL++        R NG
Sbjct:   23 MSLLAFSPSIRLPLSPGQKLPRIKTDKGQPICQQRKRDH-------LQASVAADTFDVITIGSGLGGLCASALLSTYNLRTLTLESHSEPGGAAHSFSRRTPHGTVTFESGPHLFSGLQSPSDNPLYHVLRAVDAKLDVKSYDAWGVFLPEAYVRTTLRAKEPLFEQLLNVAGGPTAHSDMRNLTEALRPLGEAATLLPPAAIRARDLFGSLRVASRFALSPTSLSHLPSLPLLSRPFATLLDKCVSDTFSCNFLNLLCFLLAGATAERIPVAEVAFMFREWLGDGAVPGAPVLQRPVGGASAIAKALIEAINARGGVVQMNSHVNRVLLEQGRAVGVELKSGRVIRARRAVISNVSALDVDKLLPDWGSTAQTSSSIKREVEMCPSFMHLHVALELTEELKSRLPGGSLEPNYVSVEDWELGLEHPDNVVLISVPSVLDKNLCPPGHVVLHAYTPATEPYSEWKDLAPRTREYEEYKEHRSQILWRAVNRVFGTDIRPRAYIKLIGTPRTHARFLRRRDGSYGPKVDARLGGLGLPFPGSGHYPEGFYRVGDGVFPGVGVPAVAGSSWIVANGLITTD---GCCRNNG 601          
BLAST of Gcaud7883.t1 vs. uniprot
Match: A0A2P8VVH5_9CYAN (Carotene isomerase n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A2P8VVH5_9CYAN)

HSP 1 Score: 404 bits (1038), Expect = 7.690e-132
Identity = 231/541 (42.70%), Postives = 323/541 (59.70%), Query Frame = 0
Query:   50 ESYDVITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYGTITFESGPHLFSGLQFP-SENPMYHVLRAVDAKLDVT--RYDAWGVFLPNTYVRATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALRASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNFLNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAIAKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIISNVSALDVNQLLPGWKADDEKPYA---KNSGGEMCPSFMHLHVALE---LTEDIRSRLPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAYTPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVKLVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDGVFPGVGVPAVAGSAWIVANGLVSVQEHVDLL 581
             S +++ IGSG+GGLC  ALL+ Y  R    ESH+ PGGAAH F R    G  TF+SGP L+SG+ +  S NP+ HVL AV     +T   YD WGV +P      T+  G   F ++L    G +A  + R L +A+ PLG+AA+ LPPAALR    +G+L+  A Y + L  L   P L+Q  +PFSTVLDR   D F R+++NLLCFLL+G  A+    AE+AFMF EW           L  P+GG++A+  AL+  +++ GG ++ G+HV  +++E GRA GV ++SG T++A+K +ISN S  D  +L+P    D   P A   +      CPSF+HLH+ ++   L ED+           +Y+++EDW RG+D P N++++S+P+ LD ++ P G   +H YTPATEPYE W+ L+  + EY   K++R++ LWRA+ RI   D+R    V+LVGTP TH RFLR   GSYGP + A+    G  FPG     EG  CVG   FPG+G+PAVA    I AN L SV +   +L
Sbjct:    3 SSSNIVIIGSGIGGLCCGALLARYGYRVTICESHTIPGGAAHGFER----GGYTFDSGPSLYSGMSYRGSTNPLRHVLDAVGEGDSITWANYDTWGVRIPEGDFDTTV--GNDQFAEVLQTLRGDDAVQDWRWLQKAMEPLGKAATALPPAALRLD--LGALQTVAPYSWDL--LRNAPALTQSGKPFSTVLDRTTQDPFIRHWMNLLCFLLSGLPAKGTSTAEMAFMFAEWYRPGVA-----LDYPIGGSAAMVDALVRGLEKYGGTLRLGAHVEQILVEGGRATGVAMRSGETLKADK-VISNASIWDTLKLVP----DGALPKAFVEERQATPECPSFLHLHLGIDGAGLPEDLAC---------HYITIEDWDRGIDAPQNLIVMSIPTVLDPSLAPPGKHTIHVYTPATEPYELWQGLDRRSDEYAALKKERAEPLWRALERII-PDVRQRVEVELVGTPLTHERFLRCHRGSYGPAISAQ----GGMFPGPKTPLEGLLCVGGSTFPGIGLPAVAACGLITANTLTSVSQQRQML 509          
BLAST of Gcaud7883.t1 vs. uniprot
Match: A0A2W1JYB4_9CYAN (Carotenoid isomerase n=1 Tax=Acaryochloris sp. RCC1774 TaxID=1764569 RepID=A0A2W1JYB4_9CYAN)

HSP 1 Score: 403 bits (1035), Expect = 2.460e-131
Identity = 225/534 (42.13%), Postives = 318/534 (59.55%), Query Frame = 0
Query:   53 DVITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYGTITFESGPHLFSGLQF-PSENPMYHVLRAVDAKLDVTRYDAWGVFLPNTYVRATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALRASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNFLNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAIAKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIISNVSALDVNQLLPGWKADDEKPYAKNSGGEMCPSFMHLHVALELTEDIRSRLPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAYTPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVKLVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDGVFPGVGVPAVAGSAWIVANGLVSVQEHVDLLRRNG 585
            DV+ IGSG+GGLC +ALL+ Y       ESH+ PGGAAH+F R        F+SGP L+SGL + PS +P+  VL A+   L+   YD WG  LP       +  G   F+++L+   GP A  E     + + PL EAA  +PPAA RA   +G +R   RY+ ++  L Q   + QL+ PFS +L R +SD F   ++++LCFLL+G  A+    AE+AFMF EW   + V     L  PVGGA     AL+  +++RGG +  G+HV  V+IE+ RA+GVQL++G+T+RA +A++SN S  D  +LLP   A  +K   +      C SFMHLH+ ++      + LP   LE +Y+ V+DW  G+  P N+VL+S+PS LD ++ P G  V+HAYTP  EPYE W+ ++  +  Y   K++RS+I+W+A+ R+   DI     + LVGTP TH+RFLRR  GSYGP + A   G  + FPG G    G  C GD  FPG+G+PAVA S  I AN L +V +H+ +L+  G
Sbjct:    9 DVVVIGSGIGGLCCAALLARYGFDVTVCESHTIPGGAAHAFER----DGFKFDSGPSLYSGLSYSPSSSPLRQVLDAIGEDLEWKTYDVWGCHLPEGSFNNPI--GTDQFDEVLEQFQGPQAVAEWHRFKKVMAPLAEAAIAIPPAAFRAD--LGVVRTLGRYLPAM--LKQTKYIRQLTGPFSRILGREISDPFIHRWMDMLCFLLSGLPADGTIAAEMAFMFAEWYQPNMV-----LDYPVGGAGTFVDALVRGLEKRGGTLMLGAHVEQVLIENKRAVGVQLRNGKTLRAKRAVVSNASVWDTLKLLPEG-AVPKKFVTERQATPECESFMHLHLGIDA-----ANLPED-LECHYIVVKDWELGITAPQNIVLLSIPSVLDPSLAPPGKHVIHAYTPGNEPYEVWQGMDRRSDAYQQLKQERSEIMWQAIKRVM-PDICDRTELTLVGTPLTHARFLRRHHGSYGPAIRA---GQSI-FPGPGTPLSGLLCCGDSTFPGIGLPAVAASGMIAANTLATVPQHLKMLKEIG 515          
BLAST of Gcaud7883.t1 vs. uniprot
Match: A0A7T5E2U6_9CYAN (Carotene isomerase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A7T5E2U6_9CYAN)

HSP 1 Score: 401 bits (1030), Expect = 1.040e-130
Identity = 227/531 (42.75%), Postives = 319/531 (60.08%), Query Frame = 0
Query:   54 VITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYGTITFESGPHLFSGLQF-PSENPMYHVLRAVDAKLDVT--RYDAWGVFLPNTYVRATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALRASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNFLNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAIAKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIISNVSALDVNQLLPGWKADDEKPYAKNSGGEMCPSFMHLHVALELTEDIRSRLPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAYTPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVKLVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDGVFPGVGVPAVAGSAWIVANGLVSVQEHVDLL 581
            +I IGSG+GGLC  ALL+ Y LR +  ESH+ PGGAAH F R+       F+SGP L+SGL   PS NP+ HVL A+     +T   YD WGV +P      T+  G   F Q+L    G NA  E R L R + PLG AA+ LPPA LR     G+L+    Y + L  L   P L+Q S+PFST+L+R V+D F R+++++LCFLL+G  AE    AE+AFMF EW           L  P+GG++A+  AL+  +++ GG ++ G+ V+ +++++GRA GV+L+SG T+ A  A++SN S  D   L+P   A  +    +      CPSF+HLH+ ++ T      LP   L  +Y++++DW  G+  P N++++S+P+ LD ++ PAG   +H YTPATEPY+ W+ L+  + EY   K +R++ LW+A+ R+   D+R    V+LVGTP TH RFLRR  GSYGP V  +    GL   G    P G +C GD  FPG+G+PAVA S WIVAN L SV +   LL
Sbjct:    1 MIIIGSGIGGLCCGALLARYGLRVVVCESHTIPGGAAHGFERQG----FRFDSGPSLYSGLSSRPSTNPLRHVLDALGEADSITWANYDTWGVRIPEGDFDTTI--GNDQFCQVLQRVRGDNAVQEWRRLQRVMAPLGRAATALPPATLRLD--FGALQTVLPYAWEL--LQNAPALAQSSQPFSTILNRTVTDPFIRHWMDMLCFLLSGLPAEGTSTAEIAFMFAEWYRPGVT-----LDYPIGGSAALVNALVRGLEKFGGTLRLGAPVKEILVQNGRATGVRLRSGETLTAGTAVVSNASIWDTLPLVPAG-ALPQSFIDERKAMPTCPSFLHLHLGIDATG-----LPED-LACHYITLQDWGLGITAPHNLIVMSIPTVLDPSLAPAGKHTIHVYTPATEPYDLWQGLDRRSAEYAALKAERAEPLWQALERVI-PDVRQRVEVELVGTPLTHERFLRRYRGSYGPAVSVQD---GLVPSGKTPLP-GLWCTGDCTFPGIGLPAVAASGWIVANSLTSVSQQQRLL 504          
BLAST of Gcaud7883.t1 vs. uniprot
Match: A0A2K3CAA9_9CHRO (Carotene isomerase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A2K3CAA9_9CHRO)

HSP 1 Score: 400 bits (1029), Expect = 1.840e-130
Identity = 227/533 (42.59%), Postives = 319/533 (59.85%), Query Frame = 0
Query:   53 DVITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYGTITFESGPHLFSGLQFPSENPMYHVLRAVDAKLDVTRYDAWGVFLPNTYVRATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALRASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNFLNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAIAKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIISNVSALDVNQLLPGWKADDEKPYAKNSGGEMCPSFMHLHVALELTEDIRSRLPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAYTPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVKLVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDGVFPGVGVPAVAGSAWIVANGLVSVQEHVDLLRRNG 585
            DVI IGSG+GGLC  ALL+ Y  +    ESH+ PGGAAH F R        F+SGP L+SGL  PS NP+  VL A++ ++    YD WG +LP       +  G   F Q+L    G  A  E RNL   + PLG+A+  LPP A+R+    G LR    ++ +L  + Q     QL   F  + D+ +SD F RN+L+LLC+LL+G  A     AE+AFMF +W   +       L  PVGG++A+ +AL+  +++ GG ++ G+ V  ++IE  RA+GV+LK+G T++A+KA++SN S  D  +LLP  K        K +  + CPSFMHLH+ ++ T DI   LP      +++ V DW +G+  P NVVL+S+PS LD ++ P+G  V+HAYTPA+EPYE W  L+  +  Y   KE+RS++LW AV+R+    +R  A V L+GTP TH RFLRR  G+YGP + A+    G  FPG+    +G  C GD  FPG+G+PAVA S  I AN + SV++H+ LLR  G
Sbjct:    6 DVIIIGSGIGGLCAGALLARYGFQVTVCESHTIPGGAAHGFER----DGYLFDSGPSLYSGLSAPSANPLRQVLDAIEEEVTCINYDTWGCWLPEG--NFNMAVGAEQFCQVLRELRGEKAVTEWRNLQEMMTPLGKASMALPPTAVRSDW--GILRTLLPFLPNL--IQQGSHTLQLMGAFDRIRDQVISDRFLRNWLDLLCYLLSGLPANGTSAAEMAFMFADWYRPNVK-----LDYPVGGSAALVEALVRGLKKYGGELRLGATVAEILIEGKRAVGVRLKNGDTLKASKAVVSNASVWDTLKLLPKNKIPQAFQKEKETIPQ-CPSFMHLHLGIDGT-DIPETLPC-----HHIIVNDWEKGVTAPQNVVLVSIPSLLDPSLAPSGKHVIHAYTPASEPYELWEGLDRKSKAYQQQKEERSKVLWEAVSRVI-PQVRDRAEVTLIGTPLTHERFLRRHRGTYGPAISAKT---GF-FPGATTPWQGLLCCGDSTFPGIGLPAVAASGAIAANSVASVEQHLQLLRDTG 511          
BLAST of Gcaud7883.t1 vs. uniprot
Match: UPI00187E2850 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Leptolyngbya ectocarpi TaxID=1202 RepID=UPI00187E2850)

HSP 1 Score: 399 bits (1026), Expect = 5.030e-130
Identity = 226/538 (42.01%), Postives = 321/538 (59.67%), Query Frame = 0
Query:   50 ESYDVITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYGTITFESGPHLFSGLQF-PSENPMYHVLRAVDAKLDVTRYDAWGVFLPNTYVRATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALRASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNFLNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAIAKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIISNVSALDVNQLLPGWKADDEKPYAKNSGGEMCPSFMHLHVALELTEDIRSRLPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAYTPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVKLVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDGVFPGVGVPAVAGSAWIVANGLVSVQEHVDLLRRNGI 586
            E  +V+ IGSG+GGLC +ALL+ Y    +  ESHS  GGAAH F R    G  +F+SGP L+SGL + PS NP+  VL A+        YD WG  LP      T+ A +  F Q+LD   GP A  E R+L R ++PLG AA  LPPAA+R    +G+ +    ++ SL  L Q P++++L+ PFS ++D  + D+FAR++L++LCFLL+G  A     AEVAFMF +W           L  P GG++A+  AL+  +Q++GG ++  SH++ ++++  RA+GVQL++G TI+A+KA+ISN S  D  +LLP   +   +   K      C SFMHLH+ L+ T           L  +Y+ V DW++G+D P N+VLISVPS LD ++ P G   +H YTP  EPY  W  L   + EY   K +R++++W+A+ RI   DIR    + LVGTP TH RFLRR  GSYGP + A   G G+ FPG     +  +C GD  FPG+G+PAVA S  ++AN L    +H+ +LR  G+
Sbjct:    2 EQTEVVVIGSGIGGLCCAALLARYGYDVVVCESHSIAGGAAHGFER----GGFSFDSGPSLYSGLSYSPSPNPLRQVLDAIGEDAPWLNYDTWGCCLPEGDFDTTVGAEQ--FCQVLDHLRGPKAVQEWRHLQRIMQPLGAAAIALPPAAIRFD--LGAFQTVRHFLPSL--LKQGPQVARLTGPFSRIMDGIIQDDFARHWLDMLCFLLSGLPAAGTIAAEVAFMFADWYRPGVQ-----LDYPKGGSAALVAALVRGLQKQGGDLRLNSHIKEILLDGDRAVGVQLRNGETIQASKAVISNASIWDTLKLLPSLPSKLHRFVKKRQAIPECDSFMHLHLGLDATG-------LEGLACHYIVVNDWSQGIDAPQNLVLISVPSVLDPSLAPPGKHAVHVYTPGNEPYPLWAGLNRHSAEYAQLKHQRAEVMWQALARII-PDIRDRCDLILVGTPLTHGRFLRRYHGSYGPAIRA---GQGI-FPGPRTPIKHLWCCGDSTFPGIGLPAVAASGMMLANTLAPTAKHMTMLREIGV 512          
BLAST of Gcaud7883.t1 vs. uniprot
Match: A0A1Q8ZA05_9CYAN (Carotene isomerase n=1 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922337 RepID=A0A1Q8ZA05_9CYAN)

HSP 1 Score: 398 bits (1023), Expect = 1.210e-129
Identity = 236/535 (44.11%), Postives = 314/535 (58.69%), Query Frame = 0
Query:   50 ESYDVITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYGTITFESGPHLFSGLQF-PSENPMYHVLRAVDAKLDVTRYDAWGVFLPNTYVRATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALRASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNFLNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAIAKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIISNVSALDVNQLLPGWKADDEKPYAKNSGG-EMCPSFMHLHVALELTEDIRSRLPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAYTPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVKLVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDGVFPGVGVPAVAGSAWIVANGLVSVQEHVDLLR 582
            E+ DV+ IGSG+GGLC +ALL+ Y  + L  ESHS PGGAAH+F     Y    F+SGP L+SGL + PS NP+  VL A+   +    YDAWG FLP  Y RA +  G   F QLL    GP+A  E + L R + PL  A+  +PP A+R+   +    V+    F  + L     + QLS PFS +LD  V D   RN+L+LLCF+L+G  A+    AE+AFMF +W   + V     L  P GG  A+  AL+  ++R GG ++  + V+ ++++  +A+GV+LK+G  IRA  A++SN S  D  +LLP    D   P  +       CPSFMHLH+ +E  +     LP   LE +Y+ V DW RG+D P NVV +S+PS LD  + P+G   LHAYTPATEPYE W  L+  +  Y   K +RSQ+LW+ + RI   D+R    V LVGTP TH RFLRR  GSYGP + A   G GL FPG     +G  C GD  FPG+GVPAVA S  I AN L S+ +H +LL+
Sbjct:    2 ETVDVVVIGSGIGGLCCAALLARYGFQVLVCESHSIPGGAAHAFE----YQGFHFDSGPSLYSGLSYSPSANPLRQVLDAIGEDVPWLTYDAWGCFLPEGYFRAAV--GAESFTQLLAQWRGPDAVAEWQQLQRLMEPLKAASIAIPPMAVRSDWGM----VSTLSPFLPNILKHAWTMLQLSGPFSQLLDGVVYDPLIRNWLDLLCFMLSGLPAKGTIAAEMAFMFADWYRPNVV-----LDYPQGGGGALIGALVRGLKRYGGRLRLHAPVQQILVKQQQAVGVKLKTGEQIRARHAVVSNASGWDTLKLLP---EDTLTPVLEERQQIRACPSFMHLHLGIEAAD-----LPPD-LECHYLIVNDWERGVDAPQNVVAVSIPSVLDATLAPSGKHCLHAYTPATEPYELWAGLDRKSDRYQQLKTERSQVLWQGLERII-PDLRNRCEVTLVGTPLTHERFLRRDRGSYGPAIPA---GQGL-FPGCKTALKGLLCCGDSTFPGIGVPAVAASGMIAANTLASISQHRELLK 507          
BLAST of Gcaud7883.t1 vs. uniprot
Match: A0A2P8WEH1_9CYAN (Carotene isomerase n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8WEH1_9CYAN)

HSP 1 Score: 397 bits (1019), Expect = 5.310e-129
Identity = 232/533 (43.53%), Postives = 316/533 (59.29%), Query Frame = 0
Query:   53 DVITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYGTITFESGPHLFSGLQF-PSENPMYHVLRAVDAKLDVTRYDAWGVFLPNTYVRATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALRASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNFLNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAIAKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIISNVSALDVNQLLPGWKADDEKPYAKNSGGEM--CPSFMHLHVALELTEDIRSRLPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAYTPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVKLVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDGVFPGVGVPAVAGSAWIVANGLVSVQEHVDLLR 582
            DV+ +GSG+GGLC  A+L+ Y  R    ESHS PGGAAH F R        F+SGP L+SGL   PS NP+ HVL A+   LD   YD WGV LP      T+ A +  F ++L   GG  A  + R+L   + PLG AA  LPPAA+R      + R  A +++ L  + Q P L++L+ PFS ++DR VSD F RN+L+LLCFLL+G  A     AE+AFMF EW           L  P+GG++A+  AL   ++  GG ++  +HV  +++E GRA+GV+L +G  + A++A+ISN S  D   LLP        P   +   ++  CPSFMHLH+ ++      + LP   L  +Y+ V DW +G+D P NVVLIS+PS LD ++ P G  V+H YTP +EPY+ W+ L  G+ EY   K++RSQ++W+A+ R+   DIR    V LVGTP TH RFLRR  G+YGP + A   G G  FPG      G  C GD  FPG+G+PAVA S  I A+GLV V + + +LR
Sbjct:    4 DVVIVGSGIGGLCCGAMLARYGSRVTVCESHSIPGGAAHGFERLG----YRFDSGPSLYSGLSHRPSTNPLRHVLDALGEDLDWATYDRWGVSLPEGDFLTTVGADQ--FTEVLQNLGGLEAVRQWRSLQATMEPLGRAAISLPPAAVRPDWK--AWRSIAPFIWKL--IRQGPALARLNGPFSAIMDRNVSDPFIRNWLDLLCFLLSGLPASGTSAAEMAFMFAEWYKPGVC-----LDYPIGGSAALVAALERGLKSHGGDLRLRAHVDQILVEGGRAVGVRLNTGEIVTASRAVISNASIWDTLNLLPSGSLP---PGFLHQRAQIPPCPSFMHLHLGID-----GAGLPPD-LACHYIRVNDWQQGVDAPQNVVLISIPSVLDPSLAPVGKHVIHVYTPGSEPYDLWQGLARGSPEYADLKQQRSQVMWQALERVI-PDIRQRCEVTLVGTPLTHERFLRRHHGTYGPGISA---GDGF-FPGHKTPIPGLLCCGDSTFPGIGLPAVAASGLICAHGLVPVTQQLAMLR 507          
BLAST of Gcaud7883.t1 vs. uniprot
Match: UPI0015C3EBD5 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Nostoc sp. C052 TaxID=2576902 RepID=UPI0015C3EBD5)

HSP 1 Score: 395 bits (1016), Expect = 1.500e-128
Identity = 224/534 (41.95%), Postives = 317/534 (59.36%), Query Frame = 0
Query:   50 ESYDVITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYGTITFESGPHLFSGLQF-PSENPMYHVLRAVDAKLDVTRYDAWGVFLPNTYVRATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALRASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNFLNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAIAKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIISNVSALDVNQLLPGWKADDEKPYAKNSGGEMCPSFMHLHVALELTEDIRSRLPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAYTPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVKLVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDGVFPGVGVPAVAGSAWIVANGLVSVQEHVDLLR 582
            ++ D+I IGSG+GGL  +ALL+ Y    +  ESHS PGGAAHSF R        F+SGP L+SGL + PS NP+  VL A+ ++L    YD WG  LP      ++ A +  F ++L    G NA  E + L R + P   AA  +PPAALR    +G+ R  A +  SL  +  +  + +L+ PFS +++  V D F RN+LNLLCFLL+G  A+    AEVAFMF +W    AV     L+ P+GG+ A+   L++ ++R GG ++ G+HV  V++E  RA+GV+L+  + IRA++A+ISN S  D  +LLP  KA  ++   K      C SFMHLH+ ++  + ++S L       +Y+ V +W  G+  P NVV+IS+PS LD ++ P G  V+H YTP  EPY  W+ ++    EY   K  R++++W+A+ RI   DIR    V L+GTP TH RFLRR  GSYGP + A   G G+ FPG G    G  C GD  FPG+G+PAVA S  I AN L SV +H+ +L+
Sbjct:    2 QNTDIIVIGSGIGGLSCAALLARYGFNVIVCESHSTPGGAAHSFERNG----FKFDSGPSLYSGLSYSPSANPLRQVLDAIGSELPCVTYDTWGCCLPEGDFDTSVGAEQ--FCEVLMKFRGHNAVTEWQKLQRVMEPFASAAISIPPAALRFD--LGAARTVAPFAPSL--IKHLTDIIKLTGPFSRIMNDVVKDPFTRNWLNLLCFLLSGLPADGTSAAEVAFMFADWYRPDAV-----LEYPIGGSGALVDTLVQGLERHGGKLRLGAHVEQVLVEGDRAVGVRLRDRQEIRASRAVISNASVWDTLKLLPE-KAIPKQYRTKRQATPECDSFMHLHLGID-AQGLQSNL-----RCHYIVVNNWELGVSAPQNVVVISIPSILDPSLAPPGKHVIHVYTPGNEPYSIWQGMDRSKEEYAEQKRSRAEVMWQALQRII-PDIRSRCEVTLIGTPLTHERFLRRHQGSYGPAIKA---GSGM-FPGPGTPLAGLICCGDSTFPGIGLPAVAASGMIAANTLTSVNKHLAMLQ 508          
BLAST of Gcaud7883.t1 vs. uniprot
Match: UPI001F55765D (NAD(P)/FAD-dependent oxidoreductase n=3 Tax=Cyanobacteria TaxID=1117 RepID=UPI001F55765D)

HSP 1 Score: 396 bits (1017), Expect = 1.500e-128
Identity = 232/535 (43.36%), Postives = 317/535 (59.25%), Query Frame = 0
Query:   50 ESYDVITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYGTITFESGPHLFSGLQF-PSENPMYHVLRAVDAKLDVTRYDAWGVFLPNTYVRATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALRASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNFLNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAIAKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIISNVSALDVNQLLPGWKADDEKPYA--KNSGGEMCPSFMHLHVALELTEDIRSRLPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAYTPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVKLVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDGVFPGVGVPAVAGSAWIVANGLVSVQEHVDLL 581
            E+ DV+ +GSG+GGLC +ALL+ Y  + +  ESH+ PGGAAH+F R+       F+SGP L+SGL + PS NP+  VL A+   +    YDAWG FLP  Y RA + A EP F Q+L    G  A  E + L + + PL  A++ +PP A+R+   I +        F L++  Q   + QL+ PFS +L+  V D F RN+++LLCFLL+G  A     AE+AFMF +W     V     L  P GG +A+  AL+  +QR GG ++  + V+ ++IE  R +GVQLK+G  IRA  A++SN S  D  +L+P    ++ +  A  K      CPSFMHLH+ ++ T      LP   LE +Y+ V DW  G+D P NVV++S+PS LD ++ P G   +HAYTPATEPYE W  L   +  Y   K++R+++LW+A+ RI   DIR    V LVGTP TH RFLRR  GSYGP + A   G GL FPG     +   C GD  FPG+GVPAVA S  I AN L SV +H +L+
Sbjct:   10 ETVDVVVVGSGIGGLCCAALLARYGFQVVVCESHTIPGGAAHTFERQG----FHFDSGPSLYSGLSYSPSANPLRQVLDAIAEDVSWLTYDAWGCFLPEGYFRAVVGA-EP-FNQILQQWRGSTAVAEWQRLQQVMAPLKAASTAIPPIAVRSDWGIFNTLSP----FLLNAFKQTGSIFQLTGPFSNLLEGVVHDPFIRNWMDLLCFLLSGLPANGTLAAEMAFMFADWYRPDVV-----LDYPKGGGAALVNALVRGLQRYGGQLRLNATVQQILIERQRTVGVQLKTGEQIRARHAVVSNASGWDTLKLIP----EEIRSVALQKRQNLPACPSFMHLHLGIDATG-----LPSD-LECHYLIVNDWECGVDAPQNVVVVSIPSVLDPDLAPPGKHSIHAYTPATEPYELWAGLNRNSDRYHQLKQERAEVLWKALERII-PDIRDRCEVTLVGTPLTHERFLRRDRGSYGPAIAA---GEGL-FPGCKTPLKNLLCCGDSTFPGIGVPAVAASGMIAANTLASVSQHRELI 514          
The following BLAST results are available for this feature:
BLAST of Gcaud7883.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIT2_9FLOR2.280e-30071.99Prolycopene isomerase 1, chloroplastic n=1 Tax=Gra... [more]
A0A2P8VVH5_9CYAN7.690e-13242.70Carotene isomerase n=5 Tax=Cyanobacteria TaxID=111... [more]
A0A2W1JYB4_9CYAN2.460e-13142.13Carotenoid isomerase n=1 Tax=Acaryochloris sp. RCC... [more]
A0A7T5E2U6_9CYAN1.040e-13042.75Carotene isomerase n=3 Tax=Cyanobacteria TaxID=111... [more]
A0A2K3CAA9_9CHRO1.840e-13042.59Carotene isomerase n=3 Tax=Cyanobacteria TaxID=111... [more]
UPI00187E28505.030e-13042.01NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Leptol... [more]
A0A1Q8ZA05_9CYAN1.210e-12944.11Carotene isomerase n=1 Tax=Leptolyngbya sp. 'henso... [more]
A0A2P8WEH1_9CYAN5.310e-12943.53Carotene isomerase n=1 Tax=filamentous cyanobacter... [more]
UPI0015C3EBD51.500e-12841.95NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Nostoc... [more]
UPI001F55765D1.500e-12843.36NAD(P)/FAD-dependent oxidoreductase n=3 Tax=Cyanob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 52..150
e-value: 3.0E-14
score: 55.4
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 291..380
e-value: 9.1E-17
score: 63.1
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 49..451
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 62..358
e-value: 2.2E-12
score: 47.0
NoneNo IPR availableGENE3D3.90.660.50coord: 231..457
e-value: 9.1E-17
score: 63.1
NoneNo IPR availablePANTHERPTHR46313:SF1FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEINcoord: 36..582
IPR045892Prolycopene isomerase-likePANTHERPTHR46313FAMILY NOT NAMEDcoord: 36..582

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_465_length_24681_cov_4.375641contigNODE_465_length_24681_cov_4.375641:9128..10888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7883.t1Gcaud7883.t1Gracilaria caudata M_176_S67 malemRNANODE_465_length_24681_cov_4.375641 9128..10888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7883.t1 ID=Gcaud7883.t1|Name=Gcaud7883.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=587bp
MGILAFSSFAGVPLVDKRLQVSHSESLSKRHLLAHASRGRVLIRSSVEDE
SYDVITIGSGLGGLCTSALLSTYNLRTLTLESHSEPGGAAHSFSRRTPYG
TITFESGPHLFSGLQFPSENPMYHVLRAVDAKLDVTRYDAWGVFLPNTYV
RATLRAGEPLFEQLLDVAGGPNAHNEMRNLTRALRPLGEAASLLPPAALR
ASDAIGSLRVAARYVFSLSSLSQIPRLSQLSRPFSTVLDRFVSDEFARNF
LNLLCFLLAGATAERVPVAEVAFMFREWLGDSAVHGAPVLQRPVGGASAI
AKALIEAIQRRGGVVQTGSHVRHVIIEDGRAIGVQLKSGRTIRANKAIIS
NVSALDVNQLLPGWKADDEKPYAKNSGGEMCPSFMHLHVALELTEDIRSR
LPHGRLEPNYVSVEDWTRGLDHPDNVVLISVPSALDENVCPAGHAVLHAY
TPATEPYERWRTLEPGTLEYDLYKEKRSQILWRAVNRIFNTDIRPMAYVK
LVGTPRTHSRFLRRRDGSYGPKVDARMRGLGLPFPGSGEYPEGFYCVGDG
VFPGVGVPAVAGSAWIVANGLVSVQEHVDLLRRNGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR002937Amino_oxidase
IPR045892CrtISO-like