Gcaud7818.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7818.t1
Unique NameGcaud7818.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length169
Homology
BLAST of Gcaud7818.t1 vs. uniprot
Match: A0A2V3INM7_9FLOR (Ubiquitin-conjugating enzyme E2 7 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3INM7_9FLOR)

HSP 1 Score: 334 bits (857), Expect = 4.340e-116
Identity = 161/167 (96.41%), Postives = 163/167 (97.60%), Query Frame = 0
Query:    1 MASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQED 167
            MAS SQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDT Y+GGLFKAKLSFPPDYPYMPP MRF SDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPE+FKKKVRETVRRAQED
Sbjct:    1 MASTSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTLYDGGLFKAKLSFPPDYPYMPPTMRFTSDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEVFKKKVRETVRRAQED 167          
BLAST of Gcaud7818.t1 vs. uniprot
Match: A0A1X6PGW9_PORUM (UBC core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGW9_PORUM)

HSP 1 Score: 281 bits (718), Expect = 8.020e-95
Identity = 129/166 (77.71%), Postives = 152/166 (91.57%), Query Frame = 0
Query:    2 ASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQED 167
            ++  QA++LLMRQLK+LNKN DSGFSAGLVDD+NPFEWQVIL+GPP+T YEGGLFKA+LSFP DYP+MPP M+F + MWHPN+YKDG+VCISILH PG+DP QYE ASERW PVHTVE+IL+SVISML+ PNDESAANLDAAKEWR+TP++FK+KVR+ VRRAQED
Sbjct:    6 SARGQASLLLMRQLKDLNKNTDSGFSAGLVDDNNPFEWQVILSGPPETIYEGGLFKARLSFPADYPFMPPTMKFETAMWHPNVYKDGRVCISILHPPGNDPAQYELASERWSPVHTVETILLSVISMLASPNDESAANLDAAKEWRDTPDVFKRKVRDAVRRAQED 171          
BLAST of Gcaud7818.t1 vs. uniprot
Match: A0A7S1XC24_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XC24_9RHOD)

HSP 1 Score: 278 bits (712), Expect = 6.580e-94
Identity = 130/164 (79.27%), Postives = 148/164 (90.24%), Query Frame = 0
Query:    5 SQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQEDL 168
            +QA++LL+RQL++LNKN DSGFSAGLVD+SNPFEWQVILTGPPDT YEGGLFKA+++F  +YPYMPP MRF+S+MWHPNIYKDGKVCISILH PG+DPN YE+ASERW PVHTVESILVSVISML+ PNDES ANLDAAKEWR    IFK+KVRETVR+  EDL
Sbjct:    9 NQASLLLVRQLRDLNKNPDSGFSAGLVDESNPFEWQVILTGPPDTCYEGGLFKARMTFGAEYPYMPPTMRFVSEMWHPNIYKDGKVCISILHPPGNDPNDYEDASERWSPVHTVESILVSVISMLASPNDESPANLDAAKEWRHERAIFKRKVRETVRKTSEDL 172          
BLAST of Gcaud7818.t1 vs. uniprot
Match: A0A7S0ZB97_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB97_9RHOD)

HSP 1 Score: 276 bits (707), Expect = 2.440e-93
Identity = 128/158 (81.01%), Postives = 145/158 (91.77%), Query Frame = 0
Query:    2 ASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRE 159
            +  SQAA+LLMRQL+ELNKN DSGFSAGLVDDSNPFEWQ+ILTGP DT YEGGLFKA+++FP DYP+MPP+M+F SDMWHPN+YKDG+VCISILH PG+DPNQYENASERW+PVHTVESILVSV+SMLS PNDESAANLDAAK+WRE    FKKKVR+
Sbjct:    3 SKTSQAALLLMRQLQELNKNPDSGFSAGLVDDSNPFEWQIILTGPADTPYEGGLFKARMTFPQDYPFMPPSMKFTSDMWHPNVYKDGRVCISILHPPGNDPNQYENASERWMPVHTVESILVSVVSMLSSPNDESAANLDAAKQWREDNAGFKKKVRQ 160          
BLAST of Gcaud7818.t1 vs. uniprot
Match: A0A5J4YJ57_PORPP (Ubiquitin-conjugating enzyme E2 7 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ57_PORPP)

HSP 1 Score: 273 bits (698), Expect = 1.100e-91
Identity = 124/167 (74.25%), Postives = 150/167 (89.82%), Query Frame = 0
Query:    2 ASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQEDL 168
            +  +Q+A+LL++QLKELNK+  SGFSAGLVDDSNPFEWQ+ILTGPPDT Y+GGLFKA+++FP ++P+MPP MRF S+MWHPNIY DG+VCISILH PG DPN YE+A ERW PVHTVESIL+SVISML+ PNDESAANLDAAK+WRE PE FKKKV++TVR+AQE++
Sbjct:   13 SQTAQSALLLLKQLKELNKDPHSGFSAGLVDDSNPFEWQLILTGPPDTLYDGGLFKARMTFPHEFPFMPPTMRFSSEMWHPNIYPDGRVCISILHPPGDDPNHYESAMERWNPVHTVESILISVISMLASPNDESAANLDAAKQWREDPEAFKKKVKQTVRKAQEEI 179          
BLAST of Gcaud7818.t1 vs. uniprot
Match: M2W4X1_GALSU (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4X1_GALSU)

HSP 1 Score: 270 bits (690), Expect = 1.340e-90
Identity = 125/163 (76.69%), Postives = 145/163 (88.96%), Query Frame = 0
Query:    5 SQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQED 167
            SQAA+LLM+QLKELN+N D GFSAGLVD++NPFEWQVIL+GPPDT YEGG+FKA+L FPPDYP MPP MRF S+MWHPN+Y+DG+VCISILH PG DP+ YE+ASERW  VHTVESILVSVISML+ PNDES ANLDAAKEWRE  ++FKKKVR  VR++QE+
Sbjct:    7 SQAALLLMKQLKELNRNPDCGFSAGLVDETNPFEWQVILSGPPDTLYEGGVFKARLVFPPDYPVMPPTMRFTSEMWHPNVYQDGRVCISILHPPGDDPHNYEDASERWTAVHTVESILVSVISMLASPNDESPANLDAAKEWREDQQLFKKKVRRIVRKSQEE 169          
BLAST of Gcaud7818.t1 vs. uniprot
Match: A0A199W5H5_ANACO (Ubiquitin-conjugating enzyme E2 7 n=11 Tax=Mesangiospermae TaxID=1437183 RepID=A0A199W5H5_ANACO)

HSP 1 Score: 243 bits (619), Expect = 8.170e-80
Identity = 114/168 (67.86%), Postives = 136/168 (80.95%), Query Frame = 0
Query:    1 MASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQEDL 168
            MA+ SQA++LL +QLK+L +N   GFSAGLVDDSN FEW V + GPPDT YEGG F A +SFPP+YP  PP +RF S+MWHPN+Y DG+VCISILH PG DPN YE ASERW PVHTVESI++S+ISMLS PNDES AN++AAK+WR+  E FKKKVR  VR++QE L
Sbjct:    1 MAATSQASLLLQKQLKDLTRNPVDGFSAGLVDDSNVFEWNVTIIGPPDTLYEGGYFNAIMSFPPNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKDWRDRREEFKKKVRRIVRKSQEML 168          
BLAST of Gcaud7818.t1 vs. uniprot
Match: A0A6I9S4S4_ELAGV (ubiquitin-conjugating enzyme E2 7 isoform X2 n=10 Tax=Eukaryota TaxID=2759 RepID=A0A6I9S4S4_ELAGV)

HSP 1 Score: 243 bits (619), Expect = 8.170e-80
Identity = 116/168 (69.05%), Postives = 137/168 (81.55%), Query Frame = 0
Query:    1 MASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQEDL 168
            MAS SQA++LL +QL++L+KN   GFSAGLVDD+N FEW V + GPPDT YEGG F A +SFP +YP  PP +RFIS+MWHPN+Y DG+VCISILHAPG DPN YE ASERW PVHTVESI++S+ISMLS PNDES AN++AAKEWRE  + FKKKV   VRR+QE L
Sbjct:    1 MASTSQASLLLHKQLRDLSKNPVDGFSAGLVDDNNIFEWSVTIIGPPDTLYEGGYFNAIMSFPSNYPNSPPTVRFISEMWHPNVYPDGRVCISILHAPGEDPNGYELASERWSPVHTVESIVLSIISMLSSPNDESPANIEAAKEWRERRDEFKKKVSRIVRRSQEML 168          
BLAST of Gcaud7818.t1 vs. uniprot
Match: A0A199W1D0_ANACO (Ubiquitin-conjugating enzyme E2 7 n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A199W1D0_ANACO)

HSP 1 Score: 242 bits (618), Expect = 1.160e-79
Identity = 116/168 (69.05%), Postives = 137/168 (81.55%), Query Frame = 0
Query:    1 MASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQEDL 168
            MA++SQA++LL +QLK+L+KN   GFSAGLVDDSN FEW V + GPPDT YEGG F A +SFP +YP  PP +RF S+MWHPN+Y DG+VCISILHAPG DPN YE ASERW PVHTVESI++S+ISMLS PNDES AN++AAKEWRE  + FKKKV   VRR+QE L
Sbjct:    1 MAAHSQASLLLHKQLKDLSKNPVDGFSAGLVDDSNIFEWSVTIIGPPDTLYEGGYFNAIMSFPKNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHAPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRERRDEFKKKVSRIVRRSQEML 168          
BLAST of Gcaud7818.t1 vs. uniprot
Match: A0A388L0X6_CHABU (UBC core domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L0X6_CHABU)

HSP 1 Score: 241 bits (616), Expect = 2.260e-79
Identity = 114/164 (69.51%), Postives = 133/164 (81.10%), Query Frame = 0
Query:    3 SNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTWYEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGSDPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETPEIFKKKVRETVRRAQE 166
            S +QA++LL RQLKEL +N   GFSAGLVDDSN FEWQV + GPPDT+YEGG F A + FP +YP  PP +RF SDMWHPN+Y DG+VCISILH+PG DPN YE ASERW PVHTVE+IL+S+ISMLS PNDES AN+DAAKEWRE  E FKKKV   VR++Q+
Sbjct:    2 SETQASLLLRRQLKELTRNPVDGFSAGLVDDSNVFEWQVTIIGPPDTFYEGGFFNAIMVFPTNYPNTPPTVRFTSDMWHPNVYPDGRVCISILHSPGDDPNGYELASERWSPVHTVETILLSIISMLSSPNDESPANIDAAKEWRENREDFKKKVGRIVRKSQD 165          
The following BLAST results are available for this feature:
BLAST of Gcaud7818.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INM7_9FLOR4.340e-11696.41Ubiquitin-conjugating enzyme E2 7 n=2 Tax=Rhodymen... [more]
A0A1X6PGW9_PORUM8.020e-9577.71UBC core domain-containing protein n=1 Tax=Porphyr... [more]
A0A7S1XC24_9RHOD6.580e-9479.27Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A7S0ZB97_9RHOD2.440e-9381.01Hypothetical protein (Fragment) n=2 Tax=Timspurcki... [more]
A0A5J4YJ57_PORPP1.100e-9174.25Ubiquitin-conjugating enzyme E2 7 n=1 Tax=Porphyri... [more]
M2W4X1_GALSU1.340e-9076.69Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]
A0A199W5H5_ANACO8.170e-8067.86Ubiquitin-conjugating enzyme E2 7 n=11 Tax=Mesangi... [more]
A0A6I9S4S4_ELAGV8.170e-8069.05ubiquitin-conjugating enzyme E2 7 isoform X2 n=10 ... [more]
A0A199W1D0_ANACO1.160e-7969.05Ubiquitin-conjugating enzyme E2 7 n=3 Tax=Mesangio... [more]
A0A388L0X6_CHABU2.260e-7969.51UBC core domain-containing protein n=1 Tax=Chara b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 9..166
e-value: 8.4E-63
score: 224.6
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 2..167
NoneNo IPR availablePANTHERPTHR24067:SF312OS01G0839700 PROTEINcoord: 2..167
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 11..160
e-value: 1.6E-47
score: 160.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 6..166
score: 50.1166
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 10..161
e-value: 1.52987E-61
score: 185.098
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 3..167
e-value: 5.8E-60
score: 203.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 5..163
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 80..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_213_length_36751_cov_4.280933contigNODE_213_length_36751_cov_4.280933:31776..32601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7818.t1Gcaud7818.t1Gracilaria caudata M_176_S67 malemRNANODE_213_length_36751_cov_4.280933 31776..32601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7818.t1 ID=Gcaud7818.t1|Name=Gcaud7818.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=169bp
MASNSQAAMLLMRQLKELNKNIDSGFSAGLVDDSNPFEWQVILTGPPDTW
YEGGLFKAKLSFPPDYPYMPPAMRFISDMWHPNIYKDGKVCISILHAPGS
DPNQYENASERWLPVHTVESILVSVISMLSCPNDESAANLDAAKEWRETP
EIFKKKVRETVRRAQEDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS