Gcaud7714.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7714.t1
Unique NameGcaud7714.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length229
Homology
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BLAST of Gcaud7714.t1 vs. uniprot
Match: R7QRN7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRN7_CHOCR)

HSP 1 Score: 100 bits (249), Expect = 1.080e-22
Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 0 
Query:  105 ATGYWLSFYEASIQLRQEAITENKQTEAERYDVWAILAVRYALRVLGLRTEFYKLASEDPVTAKLILPGLERRLDIPAADNIVDSMETLDSHMMTQLMKAVATMKTSNAKN 215
            ATG WLS  +     R     +    +A  YD W+ +AVRY LR+ GLR EFY++   DP  AKL++P LE+R ++PAAD++V+ ME L++H+ +QLMKAVAT+   NA++
Sbjct:   58 ATG-WLSVKQRWYS-RTTPSRKKGDDKALLYDFWSQMAVRYGLRIAGLRCEFYRMVPRDPTYAKLVMPSLEQRNELPAADDLVEPMEKLETHICSQLMKAVATLNARNARS 166
The following BLAST results are available for this feature:
BLAST of Gcaud7714.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QRN7_CHOCR1.080e-2245.95Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_982_length_15525_cov_4.305624contigNODE_982_length_15525_cov_4.305624:5139..5825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7714.t1Gcaud7714.t1Gracilaria caudata M_176_S67 malemRNANODE_982_length_15525_cov_4.305624 5139..5825 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7714.t1 ID=Gcaud7714.t1|Name=Gcaud7714.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=229bp
MTSPFDKSLKSAEELIFKSKDVVKGKSLADSGIDPSWMASYAAIARRCRD
DRKVGLSRYPYEPGPSVSAFCGGFFENRQWPIRLALEKQSSMKTVAMHEA
NNINATGYWLSFYEASIQLRQEAITENKQTEAERYDVWAILAVRYALRVL
GLRTEFYKLASEDPVTAKLILPGLERRLDIPAADNIVDSMETLDSHMMTQ
LMKAVATMKTSNAKNKAGGQKGGAADGQ*
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