Gcaud7644.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7644.t1
Unique NameGcaud7644.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length566
Homology
BLAST of Gcaud7644.t1 vs. uniprot
Match: A0A2V3IXG2_9FLOR (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG2_9FLOR)

HSP 1 Score: 728 bits (1880), Expect = 1.070e-258
Identity = 385/569 (67.66%), Postives = 457/569 (80.32%), Query Frame = 0
Query:    7 RSVSVP-RLTGTTLAAFRKSLCRRWRLLRVAPVTHRHFRVAQLSIRPTSTRPGSPEVNIYTSP-LSSPNANFQEDTIFALSSGAGVTAGVAVIRISGPHATSCLRRLLRSQSPSAIPPPRYASLRRLYHPWSDELLDEALVLQFPGPKSFTGEDVVELHVHGSRAVISAVIDAIADCASPELVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKTCLAHVEAVIDFGDDVDDQVFEQIIPRIRELRDRIQARLRDAHRGEIIRGGARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRESTSDPIEIEGMRRARDAASRADVTVLVHDVTAGGIDAAIRTLSRRLPPTDS--DPDSHKSGKHLICVLNKVDLVDKAERDPLDDACKVFRTSLLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSANS------MPIITRARHRHHMKNAVSALDSFLEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDVIFKEFCIGK 565
            R  SVP R + ++L A  K+   RWR    +   H +  V +L I   ST+  +P  + YT+P ++     F EDTIFALSSGAGVTAGVAVIR+SGPHA  CL ++    +   +P PRYA+LR+LYHP S+ELLDEALVL FPGP SFTGEDVVEL VHGSRAVISAV++A+ADC  P+ ++RPAERGEFTRRAFENG++DLTAVEGLADLIAAET MQRKQAL   +GH+++TLE WRT+IKTCLAHVEAVIDFGDDVDDQVFE IIPR++ LR +I+A L DAHRGEIIRGGARVAIVG PNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQ+DLNGLAV VSDTAGLR+ST+DPIEIEG+RRAR+AA+RAD+TVLVHDVT G ++ A++ L  RL   D   DPD  ++ + L+CVLNKVDLV+ +++   D   +VF+TSLL+NEG++ELVDHLES IR +CEG  T  S+    + N+      MPIITRARHRHHMKNAV+ALDSF++GR+G+ PSLYLPMDLAAEDLRIA KELGAITG+ID EEVLDVIF EFCIGK
Sbjct:    8 RLASVPSRSSRSSLGALCKTFSVRWRPF--SACAHNNKSVRKLEIHAVSTKHETPTTHEYTNPAVNLTQTVFHEDTIFALSSGAGVTAGVAVIRVSGPHAADCLLKISAPSTRQKLPRPRYAALRKLYHPLSEELLDEALVLFFPGPNSFTGEDVVELQVHGSRAVISAVVNALADCTDPDTMIRPAERGEFTRRAFENGRLDLTAVEGLADLIAAETAMQRKQALWHLSGHVKETLEEWRTEIKTCLAHVEAVIDFGDDVDDQVFEDIIPRVQALRAQIKAHLDDAHRGEIIRGGARVAIVGKPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVVVSDTAGLRDSTNDPIEIEGIRRAREAAARADITVLVHDVTEGDLETALQALPSRLSACDGTQDPDD-RADQRLVCVLNKVDLVNTSDQSSKDKDIEVFKTSLLRNEGVSELVDHLESMIRVVCEGGETGGSSENTKNTNTKNTSELMPIITRARHRHHMKNAVAALDSFVQGRTGAIPSLYLPMDLAAEDLRIAGKELGAITGQIDSEEVLDVIFNEFCIGK 573          
BLAST of Gcaud7644.t1 vs. uniprot
Match: R7QKJ8_CHOCR (TrmE-type G domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKJ8_CHOCR)

HSP 1 Score: 474 bits (1220), Expect = 1.870e-161
Identity = 246/383 (64.23%), Postives = 295/383 (77.02%), Query Frame = 0
Query:  188 VRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKTCLAHVEAVIDFGDDVDDQVFEQIIPRIRELRDRIQARLRDAHRGEIIRGGARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRESTSDPIEIEGMRRARDAASRADVTVLVHDVTAGGIDAAIRTLS--RRLPPTDSDPDSHKSGKHLICVLNKVDLV-DKAERDPLDDACKVFRTSLLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSA--NSMPIITRARHRHHMKNAVSALDSFLEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDVIFKEFCIGK 565
            VRPAERGEFTRRAFENG+MDLT+VEGLADLI+AET +QRKQALRQ  G +   LE WR +IK+CLAH EAVIDFGDDVDD  FE I+PR+ +L  +++  L D HRGEI+RGGARVAIVG PNAGKSTLLNALA+RPAAIVSP AGTTRDVVEV +DLNGLAV VSDTAGLR+ T+DPIEIEGM+RAR AAS AD+T+LVHD + GG++ AI ++S  RR    D +  +H +   +ICV NK+DL+ D  E         +F TSL+ N+GL+EL  HLE+ ++   EGS      GE  S    S+P+ITRARHRHHM  AV AL  F+EGR+G +PSLYLPMD+A E+LRIAAKE+G+ITG I  EEVLDV+F EFCIGK
Sbjct:    8 VRPAERGEFTRRAFENGRMDLTSVEGLADLISAETALQRKQALRQLGGEMRDLLEGWRAEIKSCLAHAEAVIDFGDDVDDDAFEAIVPRVSDLLMKMKGHLNDGHRGEIVRGGARVAIVGQPNAGKSTLLNALAQRPAAIVSPQAGTTRDVVEVHLDLNGLAVVVSDTAGLRQDTADPIEIEGMKRARQAASNADITILVHDASQGGMETAIESISMDRRGSENDMETGTHAN---IICVANKIDLIPDSFESKTTVRDIPIFSTSLVNNDGLSELTTHLENLLKVRLEGSGGVGKDGERSSKAQGSIPVITRARHRHHMTLAVEALSVFMEGRTGDNPSLYLPMDIATEELRIAAKEIGSITGIIHVEEVLDVVFSEFCIGK 387          
BLAST of Gcaud7644.t1 vs. uniprot
Match: A0A836CK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK05_9STRA)

HSP 1 Score: 420 bits (1079), Expect = 6.980e-139
Identity = 252/498 (50.60%), Postives = 321/498 (64.46%), Query Frame = 0
Query:   79 DTIFALSSGAGVTAGVAVIRISGPHATSCLRRLLRSQSPSA-IPPPRYASLRRLYHPWSDELLDEALVLQFPGPKSFTGEDVVELHVHGSRAVISAVIDAIADCASPELVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKTCLAHVEAVIDFGDD---VDDQVFEQIIPRIRELRDRIQARLRDAHRGEIIRGGARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLR--ESTSDPIEIEGMRRARDAASRADVTVLVHDVTAGGIDAAIRTLSRRLPPTDSDPDSHKSGKHLICVLNKVDLVDKA-ERDPLDDACK----VFRTSLLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSANSMPIITRARHRHHMKNAVSALDSFLEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDVIFKEFCIGK 565
            DTIFALSSG    AGVAVIR+SGP A   L  L+ +    A +P  R A++RRLY P   +LLDEALVL  PGP+SFTGED  ELH HGSRAV+  V+ A+         +RPAERGEFT+RA+ NG+MDLT VEGLADLIAA+T  QR+QALRQ  G L+   E+WR ++  CLAH EAVIDFGDD   VD+  +  I P++  L   ++  L D  RGEI+R G RVAI G PNAGKS+LLN LA+RPAAIVSP AGTTRDVV++Q+D+ GL V +SDTAGLR  E+ +D +E EG+RRAR+A   + +T+ V D +     AA     + L  TD   D       +I V NK DL   A +++P+    +    V++ S    EG+   + HLE  I R  +     + A         P+ITRARHRHH++  +SAL+  +      DPSL  PMDLAAE+LR A+ ELG ITG +D EE+LDVIF++FCIGK
Sbjct:    4 DTIFALSSGPAGQAGVAVIRVSGPAAGDALHTLITAPGRHAKMPEARRAAVRRLYDPVKGDLLDEALVLWMPGPRSFTGEDTTELHTHGSRAVVGGVLGALGTIPG----LRPAERGEFTQRAYGNGRMDLTEVEGLADLIAADTAEQRRQALRQMGGALKDKYESWREELTKCLAHTEAVIDFGDDEDDVDEGAYAAIRPKVSGLIQELRVHLADNRRGEIVRNGVRVAIAGPPNAGKSSLLNVLAERPAAIVSPIAGTTRDVVQLQLDIAGLPVVLSDTAGLRAAEAAADDVEREGIRRAREAVVDSQLTIFVWDSSNEAEGAAAL---KDLQATDEPADVGS----VILVSNKADLGTSATQQEPMQAMVQAGQPVWQLSCKTGEGVEAFLRHLEDEIARRYQTQQGQEDA---------PLITRARHRHHVQACLSALEGSM------DPSL--PMDLAAEELRYASAELGRITGAVDVEELLDVIFRDFCIGK 473          
BLAST of Gcaud7644.t1 vs. uniprot
Match: A0A5J4YTG5_PORPP (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTG5_PORPP)

HSP 1 Score: 421 bits (1082), Expect = 9.080e-139
Identity = 254/521 (48.75%), Postives = 327/521 (62.76%), Query Frame = 0
Query:   77 QEDTIFALSSGAGVTAGVAVIRISGPHATSCLRRLLRSQSPS------AIPPPRYASLRRLYHPWSD--------------ELLDEALVLQFPGPKSFTGEDVVELHVHGSRAVISAVIDAIADCASPELVV--RPAERGEFTRRAFENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKTCLAHVEAVIDFGDDVDDQVFEQIIPRIRELRDRIQARLRDAHRGEIIRGGARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRESTSDPIEIEGMRRARDAASRADVTVLVHDV--TAGGIDAAIRTLSRRLPPTDSDPDSHKSGKHLICVLNKVDLVDKAERDPLDDACKVFRT--------SLLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSANSMPIITRARHRHHMKNAVSALDSFLEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDVIFKEFCIGK 565
            ++DTIFALSSGA   AGVAVIRISGPHA   LR LL +Q  S      A+P  R ASLR+L+   S               E+LD+ALVL+FPGP+SFTGEDVVELHVHG  AV+SAV + +       L +  RPAE+GEFTRRAFEN +MDLT VEGLADLI+AETT QR+ ALRQ  G+L    ++WR  I  C+A+VEAVIDFGDDVDD   + + P +R+L   + A ++D  RGEI+R G RVAIVG PNAGKS+LLNALAKRPAAIVS  AGTTRDV+EV +D+ G+AV +SDTAG+RE T D IE  G+ RA+ A + AD+ + V DV  T G   A++R  S          D+      ++ V NK DL  + ER       +            S     G+       E+ +R +   +S+    G E  A+   +ITRARHR H++NA+ +L +F+      +    LP+D+A E+LR AA ELG ITG I  E+VLD++F++FCIGK
Sbjct:   11 EQDTIFALSSGASQKAGVAVIRISGPHADVVLRHLLSAQDVSDPDPELALPKARMASLRKLFGGISSTSVDAGAALVGNMKEILDQALVLRFPGPRSFTGEDVVELHVHGGLAVVSAVTNELMRLRMHPLAIPLRPAEKGEFTRRAFENDRMDLTEVEGLADLISAETTEQRRLALRQMGGNLRVLYDSWRAQIIKCMANVEAVIDFGDDVDDDALDAMAPLLRDLEAELSAHVQDNRRGEIVRSGVRVAIVGAPNAGKSSLLNALAKRPAAIVSSVAGTTRDVIEVHLDVAGVAVILSDTAGIREETEDAIEQIGIERAKQALADADLVLHVVDVRQTDG---ASMRAFS----------DTQSDSVGVVTVFNKTDLSSEEERQVAAATMQQLGRAKGSELWISCTTGAGMDAFQSAFETRVRELLWNNSSG--TGHECDASPTAVITRARHRVHVENAIHSLRTFIHEFLEQN---NLPLDIATEELRHAASELGQITGTIHTEDVLDIVFQDFCIGK 513          
BLAST of Gcaud7644.t1 vs. uniprot
Match: A0A4D9CTT5_9STRA (TrmE-type G domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTT5_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 1.250e-134
Identity = 240/471 (50.96%), Postives = 301/471 (63.91%), Query Frame = 0
Query:  116 SPSAIPPPRYASLRRLYHPWSDELLDEALVLQFPGPKSFTGEDVVELHVHGSRAVISAVIDAI-ADCASPELVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKTCLAHVEAVIDFGDD---VDDQVFEQIIPRIRELRDRIQARLRDAHRGEIIRGGARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRESTSDPIEIEGMRRARDAASRADVTVLVHDVT------AGGIDAAIRTLSRRLPPTDSDPDSHKSGKHL--ICVLNKVDLVDK---------AERDPLDDACKVFRTSLLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSANSMPIITRARHRHHMKNAVSALDSFLEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDVIFKEFCIGK 565
            S +  P PR ASLR+LY P   E LD+A+VL  PGP+SFTGED VELH HGSRAV+  V +A+ A     +  VR AE GEFT RAF NG+MDLT VEGLADLIAA+T  QRKQAL+Q  G L QT E WR ++K CLAH EAVIDFGDD   VD+  ++ I PR+R L + ++  L D  RGE+IR G RVAIVG PNAGKST+LN LA+RPAAIVSP AGTTRDVVEVQ+D+ GL V VSDTAG+RE+  DP+E EG+RRAR+AA RA +TVLV D        A    A +    +  PP D +      G     + VLNK D V+          A       +   +  SL   EG+ E++  L++ +  + +   T+D   E       P+ITRARHR H++  + AL + + G  G      L +D+AAE+LRIA+ ELG ITG +D EEVLDVIF++FCIGK
Sbjct:    8 SSAPFPAPRMASLRKLYSPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGKARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGREAFASLAGVGPFLKDAPPEDLETVLRAVGGDAGALLVLNKRDTVEGEHLLEQLRCAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEA------PVITRARHRVHVERCLEALTASM-GEQG------LGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 465          
BLAST of Gcaud7644.t1 vs. uniprot
Match: A0A8J5XZ82_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZ82_DIALT)

HSP 1 Score: 406 bits (1043), Expect = 3.020e-132
Identity = 271/591 (45.85%), Postives = 347/591 (58.71%), Query Frame = 0
Query:   10 SVPRLTGTTLAAFRKSLCR--RWRLLRVAPVTHRHFRVAQLSIRPTSTRPGSPEVNIYTSPLSSPNANFQEDTIFALSSGAGVTAGVAVIRISGPHATSCLRRLL---RSQSPSAIPPPRYASLRRLYHPWSDELLDEALVLQFPGPKSFTGEDVVELHVHGSRAVISAVIDAIADCASPELVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKTCLAHVEAVIDFGDDVDD---QVFEQIIPRIRELRDRIQARLRDAHRGEIIRGGARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLR-ESTSDPIEIEGMRRARDAASRADVTVLVHDVTAG----------------GIDAAIRTLSRRLPPTDSDPDSHK---SGKHLICVLNKVDLVDKAERDPLD-----DACKVFRTSLLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSANSMPIITRARHRHHMKNAVSALDSF--LEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDVIFKEFCIGK 565
            +V RL G +  A  +++    RW   R+       F  A  S+ P ++  G+      + PLS P A    DTIFA+SSGAGV AGVAVIRISG  A   L+ ++   R     A   PR A+L +L  P SDE LD ALVL FP P+SFTGEDV ELHVHG RAV++AV+ A+       L    AERGEFTRRAF NG+MDLT VEGL+DL+AA T  QR+QAL Q  G      + WR  I  CLAH EAVIDFG+D DD    V   + PR+ EL  ++   L DA RGE++R G RV IVG PNAGKS+LLN LA+RPAAIV+P AGTTRDV+E+++ L G  + + DTAGLR    +D IE+EGMRRAR   + A + ++V DV+AG                G DAA       L   D   ++         L+ VLNKVD +  A R PL       +C+ F  S    EG+  L+D LE+ +R + EG    ++A          I+TRARHR H++ AV AL+ F  L+G         L +DLAAE+LRIAA E+G +TG I  EE+LD+IF++FCIGK
Sbjct:   10 TVQRLAGWSGGAAHRAVVAAPRWPARRI-------FVTAAPSVGPPASGSGAG----VSEPLSGPEAR---DTIFAVSSGAGVRAGVAVIRISGAGARIALQTMIARGRLDPSLAWLAPRMATLAKLLAPGSDERLDSALVLWFPAPRSFTGEDVAELHVHGGRAVVAAVLAALGALPGHRL----AERGEFTRRAFGNGRMDLTEVEGLSDLLAANTDAQRRQALAQMGGAARARFDGWRAQILDCLAHTEAVIDFGEDADDLGSDVLRVVSPRVAELAAQMTRALADARRGELLRDGPRVVIVGAPNAGKSSLLNRLAQRPAAIVTPIAGTTRDVLELELQLGGFPLRLCDTAGLRPRDEADEIEVEGMRRARALLADAPMRLVVADVSAGVPPSREELAALLRGEEGADAAGEASGAALGDGDEGANAAALDLDDSSLLVVLNKVDALP-ANRAPLSVHGIAPSCQ-FCISCETGEGMDALLDALEARVRALLEGEGGGETA----------IVTRARHREHLEQAVGALERFARLDG---------LMVDLAAEELRIAASEVGKVTGTIRVEEMLDIIFRDFCIGK 561          
BLAST of Gcaud7644.t1 vs. uniprot
Match: A0A6H5K111_9PHAE (TrmE-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K111_9PHAE)

HSP 1 Score: 407 bits (1045), Expect = 1.120e-131
Identity = 268/626 (42.81%), Postives = 337/626 (53.83%), Query Frame = 0
Query:   67 SPLSSPNANFQEDTIFALSSGAGVTAGVAVIRISGPHATSCLRRLLRSQSPSA-----------------------------------IPPPRYASLRRLYHPWSDELLDEALVLQFPGPKSFTGEDVVELHVHGSRAVISAVIDAIA--DCASPELVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKTCLAHVEAVIDFGDDVDD----QVFEQIIPRIRELRDRIQARLRDAHRGEIIRGGARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRESTSDPIEIEGMRRARDAASRADVTVLVHDVT-AGGIDAAIRTLSRRLPPTDSDPDSHKSGKH-------------------------LICVLNKVDLV---------------------------------------------DKAERDPLDDACK---------------VFRTSLLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSANSMPIITRARHRHHMKNAVSALDSFLEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDVIFKEFCIGK 565
            SPL SP+++  EDTIFAL++G    AGVAV+RISGP +   L+ L  + + S+                                    P  R A +RRLY P + +LLDEALVL  PGP+SFTGED VELH HGSRAVI+ V+DA+A    AS    VR AERGEFT+RA+ NG+MDLT VEGLADL+AA+T  QRKQAL+Q  G L    E WR  +K CLAH EAVIDFGDD +D      F  ++PR+R L   I   LRD  RGEI+R G RVAIVG PNAGKS+LLN LA RPAAIVSP AGTTRDVVEVQMD+ GL VT+SDTAGLRE+T D IE EGMRRAR A   A + + V D T   G  A +  L       +++ ++  +                            LI V NK DL                                                AE D +  A +               V++ S    EGL   ++HLE+ +R   +G++ ++S          P+ITR RHR H++  + AL      R+   P +  P+DLAAE+LRIA+ ELG ITG +  EE+LDVIF++FCIGK
Sbjct:   20 SPLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATTLSSATAAEASAGRDAGVAXXXXXXXXXXXXXAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAAMGAASGLRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLVAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFSAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEAEAEAEAAVTAAQRDYAAETEGVFGGXXXXXXXXXLDDLIVVANKADLALTLLEGESGEADHHERELTSLAAAAAAATXASGPGTTAEAVGSRAGAAETDGVGAATRGTEGDEEGTSGSGGRVWKVSCKTKEGLDGFMEHLEAEVRSRFQGAADDES----------PLITRRRHRQHVEACLLAL------RAAQRPQM--PLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 627          
BLAST of Gcaud7644.t1 vs. uniprot
Match: D8LG51_ECTSI (TrmE, organellal GTPase involved in tRNA modification n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG51_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 2.580e-127
Identity = 269/625 (43.04%), Postives = 336/625 (53.76%), Query Frame = 0
Query:   67 SPLSSPNANFQEDTIFALSSGAGVTAGVAVIRISGPHATSCLRRLLRSQSPSAI----------------------------------PPPRYASLRRLYHPWSDELLDEALVLQFPGPKSFTGEDVVELHVHGSRAVISAVIDAIAD--CASPELVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKTCLAHVEAVIDFGDDVDD----QVFEQIIPRIRELRDRIQARLRDAHRGEIIRGGARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRESTSDPIEIEGMRRARDAASRADVTVLVHDVT-AGGIDAAIRTLSRRLPPTDSDP-----------------DSHKSG------KHLICVLNKVDLV-----------------------------------------------DKAERDPLDDACK---------------VFRTSLLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSANSMPIITRARHRHHMKNAVSALDSFLEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDVIFKEFCIGK 565
            SPL S +++  EDTIFAL++G    AGVAV+RISGP +   L+ L  + + S++                                  P  R A +RRLY P + +LLDEALVL  PGP+SFTGED VELH HGSRAVI+ V+DA+A    AS    VR AERGEFT+RA+ NG+MDLT VEGLADLIAA+T  QRKQAL+Q  G L    E WR  +K CLAH EAVIDFGDD +D      F  ++PR+R L   I   LRD  RGEI+R G RVAIVG PNAGKS+LLN LA RPAAIVSP AGTTRDVVEVQMD+ GL VT+SDTAGL ++T D IE EGMRRAR A   A + + V D T   G  A +  L       +++                   S  SG        LI V NK DL                                                  AE D +  A +               V++ S    EGL   ++HLE+ +R   +G++ ++S          P+ITR RHR H++  + AL      R+   P +  P+DLAAE+LRIA+ ELG ITG +  EE+LDVIF++FCIGK
Sbjct:  184 SPLPSASSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSAANLSSVTAAEASAGGDAGVAASAAPAVVNGGGAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGMRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLPKATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEAEAEAAATAAQRDDAAEMEGVFGSGSSGGGSAALDDLIVVANKADLALTLLEGESGEAEHHEQELTSLXXXXXXXXXXXXXGPGRTAEAVGSRAGAAEMDGVGAATRGTEGDEEGRSGGGGRVWKLSCKTKEGLDGFMEHLEAEVRSRFQGAADDES----------PLITRRRHRQHVEACLLAL------RAAQRPQM--PLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 790          
BLAST of Gcaud7644.t1 vs. uniprot
Match: A0A484EFB1_BRELC (TrmE-type G domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFB1_BRELC)

HSP 1 Score: 390 bits (1003), Expect = 3.530e-127
Identity = 243/499 (48.70%), Postives = 316/499 (63.33%), Query Frame = 0
Query:   76 FQEDTIFALSSGAGVTAGVAVIRISGPHATSCLRRLLRSQSPSAIPPPRYASLRRLYHPWSDELLDEALVLQFPGPKSFTGEDVVELHVHGSRAVISAVIDAIADCASPELVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKTCLAHVEAVIDFGDDVDDQVF---EQIIPRIRELRDRIQARLRDAHRGEIIRGGARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRESTSDPIEIEGMRRARDAASRADVTVLVHDVTAGGIDAAIRTLSRRLPPTDSDPDSHKSGKHLICVLNKVDLVDKAERDPLDDAC------KVFRTSLLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSANSMPIITRARHRHHMKNAVSALDSFLEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDVIFKEFCIGK 565
            ++ DTI+ALSS  G  AGVAVIRISG  A  CL++L +S +   +P PR+A+LR+LYHP +   LD+ALVL+FP P SFTGEDVVELH HGS AVIS+V++A++         R AE GEFT RAF+N ++DL  VEGLADL++AET  QR QALRQ +G + +  E WR  +  CLA+VEA+IDFGDD DD  F   E  + R+REL D I   L D  RGEI+R G +VAIVG PNAGKS+LLN LA+RPAAIVS  AGTTRD+V+V +++ G  V VSDTAGLRE T D IE EG+ RA   AS AD+ V++ D+   G      TL      T+      +SG  +  VLNK DLVDK   + + +        ++   S  + + +   VD+L S ++   E S  N + G         IITR RHR ++ + +S+LD FL      DP      +LAAEDLR A   +G I G+ID E++LDV+F +FCIGK
Sbjct:   32 YELDTIYALSSAPG-KAGVAVIRISGEQANLCLQQLSKSLT---LPRPRFAALRKLYHPKTKTHLDDALVLRFPHPHSFTGEDVVELHTHGSAAVISSVLEALSIVPH----CRAAEAGEFTERAFDNDKIDLLQVEGLADLLSAETEAQRHQALRQLSGDIGEIYEGWRHTLVKCLAYVEAMIDFGDDEDDVTFAAYEAAVKRVRELADSICGHLADNRRGEILRNGFQVAIVGPPNAGKSSLLNRLARRPAAIVSSIAGTTRDIVQVPLNIAGYPVIVSDTAGLRE-TEDVIEKEGVLRAEQCASDADICVVMMDIQNAG------TLL-----TEKYQSYLRSGAMI--VLNKSDLVDKIHIESVLETVDSKLLERLLVVSCTEGDNIEAFVDNLASIVKEKIEESGGNSTNGA--------IITRERHRQNLVSCLSSLDQFL-----LDP---YQSELAAEDLRRAVAAIGRILGRIDVEDILDVLFADFCIGK 492          
BLAST of Gcaud7644.t1 vs. uniprot
Match: A0A1V9Y6N3_9STRA (tRNA modification GTPase TrmE n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6N3_9STRA)

HSP 1 Score: 387 bits (995), Expect = 2.780e-126
Identity = 234/490 (47.76%), Postives = 303/490 (61.84%), Query Frame = 0
Query:   79 DTIFALSSGAGVTAGVAVIRISGPHATSCLRRLLRSQSPSAIPPPRYASLRRLYHPWSDELLDEALVLQFPGPKSFTGEDVVELHVHGSRAVISAVIDAIADCASPELVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKTCLAHVEAVIDFGDDVDD---QVFEQIIPRIRELRDRIQARLRDAHRGEIIRGGARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRESTSDPIEIEGMRRARDAASRADVTVLVHDVTAGGIDAAIRTLSRRLPPTDSDPDSHKSGKHLICVLNKVDLVDKAERDPLDDACKVFRTSLLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSANSMPIITRARHRHHMKNAVSALDSFLEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDVIFKEFCIGK 565
            DTI+ALSS  G  AGVAV+RISGP A  CL +L + +    +P PR A +R ++HP S ELLD A+ ++FP PKSFTGEDVVELH+HGSR V+  V+ A+A+  S     RPAE GEFT RAFEN +MDL  VEGLADL+ AET  QRKQAL Q +G + Q  E WR  +  C+AH EA+IDFGDD DD     ++ +I +++EL   IQ  L D  RGEI+R G +VAI+G PNAGKS+LLN LA+R AAIVSP AGTTRD+V+V ++L G  VT+SDTAG+RE T D IE EG+ RA      A + +LV DV    I  ++ TL                 ++ I VLNK DL        + +A  V   S     G+  L++ L+  +  +   S  ND A  +G      +ITR RHR H+ + V  L +FLE    S+        LAAEDLR A   +G I G++D E++LDV+FK+FCIGK
Sbjct:   20 DTIYALSSAEG-RAGVAVVRISGPQANWCLMQLSKDKK-KPLPKPRMAVVRDIHHPTSRELLDSAMAIRFPQPKSFTGEDVVELHLHGSRPVVKGVLQALAEIPS----CRPAEAGEFTERAFENHKMDLMQVEGLADLLNAETEAQRKQALHQISGSVGQVYEEWRMTLIRCMAHAEAMIDFGDDEDDVTDAAYDSVILKVQELLGSIQKHLADGRRGEILRNGVQVAILGAPNAGKSSLLNILAQRDAAIVSPIAGTTRDIVQVPLNLAGYPVTLSDTAGIRE-TDDIIEQEGVLRAHKCREEAHIKLLVVDVQGSNIKESVETLI---------------DQNTIVVLNKSDLASVQLSSEVKNAKAVCSISCQSGIGIDSLLEILQRQVSEMF--SHVNDEA--QGL-----LITRERHRKHLNDCVIHLSNFLEHPHQSE--------LAAEDLRRAIHSIGRIVGRVDVEDILDVLFKDFCIGK 470          
The following BLAST results are available for this feature:
BLAST of Gcaud7644.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXG2_9FLOR1.070e-25867.66tRNA modification GTPase GTPBP3, mitochondrial n=1... [more]
R7QKJ8_CHOCR1.870e-16164.23TrmE-type G domain-containing protein n=1 Tax=Chon... [more]
A0A836CK05_9STRA6.980e-13950.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5J4YTG5_PORPP9.080e-13948.75tRNA modification GTPase GTPBP3, mitochondrial n=1... [more]
A0A4D9CTT5_9STRA1.250e-13450.96TrmE-type G domain-containing protein n=4 Tax=Mono... [more]
A0A8J5XZ82_DIALT3.020e-13245.85Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A6H5K111_9PHAE1.120e-13142.81TrmE-type G domain-containing protein n=1 Tax=Ecto... [more]
D8LG51_ECTSI2.580e-12743.04TrmE, organellal GTPase involved in tRNA modificat... [more]
A0A484EFB1_BRELC3.530e-12748.70TrmE-type G domain-containing protein n=1 Tax=Brem... [more]
A0A1V9Y6N3_9STRA2.780e-12647.76tRNA modification GTPase TrmE n=1 Tax=Thraustothec... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025867MnmE, helical domainPFAMPF12631MnmE_helicalcoord: 208..562
e-value: 1.9E-50
score: 172.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 301..488
e-value: 4.4E-104
score: 350.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 153..464
IPR018948GTP-binding protein TrmE, N-terminalPFAMPF10396TrmE_Ncoord: 80..204
e-value: 1.3E-36
score: 125.4
IPR027368tRNA modification GTPase MnmE domain 2GENE3D1.20.120.430tRNA modification GTPase MnmE domain 2coord: 206..565
e-value: 4.4E-104
score: 350.8
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 301..463
e-value: 3.9E-18
score: 63.7
IPR004520tRNA modification GTPase MnmETIGRFAMTIGR00450TIGR00450coord: 92..565
e-value: 1.0E-80
score: 269.9
IPR004520tRNA modification GTPase MnmEHAMAPMF_00379GTPase_MnmEcoord: 79..565
score: 30.092113
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 302..428
e-value: 2.9E-22
score: 78.9
IPR027266GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1GENE3D3.30.1360.120Probable tRNA modification gtpase trme; domain 1coord: 73..205
e-value: 1.6E-42
score: 146.5
NoneNo IPR availablePANTHERPTHR42714:SF2TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIALcoord: 78..565
NoneNo IPR availablePANTHERPTHR42714TRNA MODIFICATION GTPASE GTPBP3coord: 78..565
NoneNo IPR availableSUPERFAMILY116878TrmE connector domaincoord: 206..565
IPR031168TrmE-type guanine nucleotide-binding domainPROSITEPS51709G_TRMEcoord: 300..469
score: 58.784599
IPR031168TrmE-type guanine nucleotide-binding domainCDDcd04164trmEcoord: 298..468
e-value: 4.63425E-50
score: 168.056

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_240_length_34680_cov_4.545549contigNODE_240_length_34680_cov_4.545549:25724..27421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7644.t1Gcaud7644.t1Gracilaria caudata M_176_S67 malemRNANODE_240_length_34680_cov_4.545549 25724..27421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7644.t1 ID=Gcaud7644.t1|Name=Gcaud7644.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=566bp
MALLFARSVSVPRLTGTTLAAFRKSLCRRWRLLRVAPVTHRHFRVAQLSI
RPTSTRPGSPEVNIYTSPLSSPNANFQEDTIFALSSGAGVTAGVAVIRIS
GPHATSCLRRLLRSQSPSAIPPPRYASLRRLYHPWSDELLDEALVLQFPG
PKSFTGEDVVELHVHGSRAVISAVIDAIADCASPELVVRPAERGEFTRRA
FENGQMDLTAVEGLADLIAAETTMQRKQALRQFTGHLEQTLEAWRTDIKT
CLAHVEAVIDFGDDVDDQVFEQIIPRIRELRDRIQARLRDAHRGEIIRGG
ARVAIVGHPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAV
TVSDTAGLRESTSDPIEIEGMRRARDAASRADVTVLVHDVTAGGIDAAIR
TLSRRLPPTDSDPDSHKSGKHLICVLNKVDLVDKAERDPLDDACKVFRTS
LLQNEGLTELVDHLESTIRRICEGSSTNDSAGEEGSANSMPIITRARHRH
HMKNAVSALDSFLEGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDC
EEVLDVIFKEFCIGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025867MnmE_helical
IPR027417P-loop_NTPase
IPR018948GTP-bd_TrmE_N
IPR027368MnmE_dom2
IPR005225Small_GTP-bd_dom
IPR004520GTPase_MnmE
IPR006073GTP-bd
IPR027266TrmE/GcvT_dom1
IPR031168G_TrmE