Gcaud7629.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7629.t1
Unique Name	Gcaud7629.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	524

Homology

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BLAST of Gcaud7629.t1 vs. uniprot
Match: A0A2V3J2N0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2N0_9FLOR)

HSP 1 Score: 335 bits (860), Expect = 6.730e-106
Identity = 226/527 (42.88%), Postives = 311/527 (59.01%), Query Frame = 0

Query:   11 RWLEMIHTREVTSLAKRHDISLDDNLIRFLEEYSEVVLHVTAKQKERKTNQSVLQQELEDVNRVVQDEVNAIREALFPNNEEARHYFFAVQHQETYLPIVHLAIRGLPELLVHVTRTYATRKKGTSFGLLSKS-TGGALWGATARAANYLRRRCRDQHWDLSVSEVVNLWYQQALEIPPEERMRPERSPSSVAKRHRSIRRR--ARLQAEIQASM------TTTQRDGKKRKVRIDAVERELADVPN-RSPTKKRRRTEAVEPSEMREASETVPENGPYEDAFRKDKTVKPGVAANQEVEANVAKHHDYVATSATTVEKHSFGRKDNKIERGELE-LRYETLRGKREEVPKKGETEAETKACQHERTLRTRVDKRNDVRTKRTRKLVASAFLTSSSQARNRGQDGDFKQVEIDEGFDTIGGMGDYDSEESDNESGDHNGEHALPVQQIRFEQVHTDSVDKTGNSDNEGGIVEVGKTTE-----------------MDRLHSASKEQKFASYRFADALSAVNLAGNDE 509
            RWLE+IHT +VT+LAKRH++ L DN+IRFLE ++EV+L VTAKQ+ERK+NQ+  Q+ELE+VN VVQDEV  +R+ALFPN  E   YF+A++H ETYLP+VHLAI+GLPEL+VHVTR Y T++KG  FG++SK   GG L GA ARAANYLR +CR +HWDL++SEVVN+WY+QALEIPPEER RP R PS+  KR R+ ++R  +R   E  A++      TTT  D        D V+++     N R   +   RTE    SE +     + +   Y +   K    +     N E  +N A  +  VA +  ++++     +D  IE+ +   L +  +   RE     GE +          T  T  D +     +++ KL A+ FL   S +R        K+VE+DEGFDT+ GM DYD ++SD E  D++     P Q+I+FE V  D  + T N    G ++  G+TTE                 MD LH+ ++   FAS RFADAL+AVNLAGND+
Sbjct:   11 RWLEIIHTSQVTNLAKRHEVKLGDNVIRFLEGFAEVILQVTAKQRERKSNQAQTQRELEEVNIVVQDEVRNVRKALFPNKHETERYFYAIRHDETYLPVVHLAIKGLPELIVHVTRAYGTKRKGICFGIVSKQYVGGRLTGAVARAANYLRHKCRAKHWDLTISEVVNVWYRQALEIPPEERTRPVRHPSTGLKRDRTSQQRPYSRRDQERAATIAPTAIATTTTTDATTAVASPDHVQQKPTHKQNLREDEEGLDRTENT--SERQLKRRKLDDTSMYNETTDKQMPQRSDTQENNESLSN-AITNKRVARNTKSIDREMAEGEDELIEKPKQSALPFNEVSEAREIPRTAGEVQETNIIDDSVPTGETSQDYK-----RKSGKLEAADFLMPESHSRRSSGGEGTKKVEVDEGFDTLAGMTDYDIDDSDFEGEDNDTHFVEPQQKIQFEFV--DDAEDTNN----GKVMNFGETTEQVEKDGGTGNNQCKAVEMDPLHTTTEGTVFASPRFADALNAVNLAGNDD 523

The following BLAST results are available for this feature:

BLAST of Gcaud7629.t1 vs. uniprot

BLAST of Gcaud7629.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J2N0_9FLOR	6.730e-106	42.88	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 396..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..379

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_534_length_22701_cov_4.725210	contig	NODE_534_length_22701_cov_4.725210:17417..18988 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7629.t1	Gcaud7629.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_534_length_22701_cov_4.725210 17417..18988 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7629.t1 ID=Gcaud7629.t1|Name=Gcaud7629.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=524bp
MVERGGRRGNRWLEMIHTREVTSLAKRHDISLDDNLIRFLEEYSEVVLHV
TAKQKERKTNQSVLQQELEDVNRVVQDEVNAIREALFPNNEEARHYFFAV
QHQETYLPIVHLAIRGLPELLVHVTRTYATRKKGTSFGLLSKSTGGALWG
ATARAANYLRRRCRDQHWDLSVSEVVNLWYQQALEIPPEERMRPERSPSS
VAKRHRSIRRRARLQAEIQASMTTTQRDGKKRKVRIDAVERELADVPNRS
PTKKRRRTEAVEPSEMREASETVPENGPYEDAFRKDKTVKPGVAANQEVE
ANVAKHHDYVATSATTVEKHSFGRKDNKIERGELELRYETLRGKREEVPK
KGETEAETKACQHERTLRTRVDKRNDVRTKRTRKLVASAFLTSSSQARNR
GQDGDFKQVEIDEGFDTIGGMGDYDSEESDNESGDHNGEHALPVQQIRFE
QVHTDSVDKTGNSDNEGGIVEVGKTTEMDRLHSASKEQKFASYRFADALS
AVNLAGNDEGANHVKREDEEHVM*