Gcaud7564.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7564.t1
Unique NameGcaud7564.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length225
Homology
BLAST of Gcaud7564.t1 vs. uniprot
Match: A0A2V3J409_9FLOR (Ubiquitin-conjugating enzyme E2 T n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J409_9FLOR)

HSP 1 Score: 284 bits (727), Expect = 1.900e-94
Identity = 146/222 (65.77%), Postives = 172/222 (77.48%), Query Frame = 0
Query:    3 SVANKRITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTPYERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQWTQLYAIPSKTSQQRTETAPPEQHTSAEHRSQPTSSPQRRDQRVPS--QARTEPSTDAVAPPAPSLEPRLKKAR 222
            SVANKRI REL LLARGSAAPGIAAWARDE +RLD+LDAEI GA+DTPY  GVFRLELHIPREYPFKPPRVRF+TKIYHPN+D++GRICLDSLNMPP G WKPSLN+ T+LT+IQALMSTPNADDGLMADIT EYRT PA+FRRKA +WT +YA P  + +      PP+     ++ S P+ S Q   +++PS  +   +   DA+ P  P+L P  KK R
Sbjct:    4 SVANKRIKRELDLLARGSAAPGIAAWARDEASRLDLLDAEICGAADTPYHSGVFRLELHIPREYPFKPPRVRFLTKIYHPNIDTEGRICLDSLNMPPNGAWKPSLNIATVLTTIQALMSTPNADDGLMADITDEYRTTPAVFRRKAEEWTNMYANPRNSHKCSDAANPPQGGQLDQNESHPSDSQQHAAKQLPSLHEQNADHDEDAIEP-QPTLGPLNKKQR 224          
BLAST of Gcaud7564.t1 vs. uniprot
Match: R7Q2H8_CHOCR (UBC core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2H8_CHOCR)

HSP 1 Score: 241 bits (616), Expect = 1.480e-77
Identity = 114/153 (74.51%), Postives = 130/153 (84.97%), Query Frame = 0
Query:    4 VANKRITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTPYERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQWTQLYA 156
            +AN+R+ REL+LL+RG AAPGIAAW RDEG RLDVLDAEI GASDTPYE G+FRLE+ IP EYP KPPRVRF+TKIYHPN+DS GRICLDSLNMPPKG WKPSLNV T+LT+IQALMS PN DDGLM +IT E+R  P +FR KA + T+ YA
Sbjct:    5 MANRRMKRELELLSRGGAAPGIAAWPRDEGNRLDVLDAEIRGASDTPYEGGIFRLEVVIPAEYPLKPPRVRFMTKIYHPNIDSQGRICLDSLNMPPKGAWKPSLNVSTLLTTIQALMSEPNGDDGLMVEITEEFRRRPEVFRNKARECTRKYA 157          
BLAST of Gcaud7564.t1 vs. uniprot
Match: A0A226NS10_COLVI (UBC core domain-containing protein n=7 Tax=Galloanserae TaxID=1549675 RepID=A0A226NS10_COLVI)

HSP 1 Score: 188 bits (477), Expect = 1.970e-57
Identity = 88/157 (56.05%), Postives = 114/157 (72.61%), Query Frame = 0
Query:    8 RITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTPYERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQWTQLYAIPSKTSQQ 164
            R++REL +L+     PGI+ W    G RLD L A+I GA+DTPYE+G+F LE+ +P  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ T+LTSIQ LM+ PN DD LMADI+ EY+ N  LF   A +WT+ YA   K  +Q
Sbjct:    6 RLSRELSMLS-AEPPPGISCW--QSGARLDELRAQIIGAADTPYEKGIFNLEIVVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNISTLLTSIQLLMAEPNPDDPLMADISSEYKYNKQLFLLNAKEWTEKYANQQKRDKQ 159          
BLAST of Gcaud7564.t1 vs. uniprot
Match: A0A7K9Y8U6_9GALL (UBE2T enzyme (Fragment) n=2 Tax=Galliformes TaxID=8976 RepID=A0A7K9Y8U6_9GALL)

HSP 1 Score: 185 bits (470), Expect = 1.810e-56
Identity = 86/149 (57.72%), Postives = 111/149 (74.50%), Query Frame = 0
Query:    8 RITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTPYERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQWTQLYA 156
            R++REL +L+     PGI+ W    G RLD L A+I GA+DTPYE+G+F LE+ +P  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ T+LTSIQ LM+ PN DD LMADI+ EY+ N  LF   A +WT+ YA
Sbjct:    6 RLSRELTMLST-EPPPGISCW--QSGARLDELRAQIIGAADTPYEKGIFNLEIVVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNISTLLTSIQLLMAEPNPDDPLMADISSEYKYNKQLFLLNAKEWTEKYA 151          
BLAST of Gcaud7564.t1 vs. uniprot
Match: A0A7K7LCM0_9AVES (UBE2T enzyme (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7K7LCM0_9AVES)

HSP 1 Score: 185 bits (470), Expect = 1.810e-56
Identity = 87/149 (58.39%), Postives = 110/149 (73.83%), Query Frame = 0
Query:    8 RITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTPYERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQWTQLYA 156
            R+ REL LL+     PGI  W    G+RLD L A+I GA+DTPYE+G+F LE+ +P  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ T+LTSIQ LM+ PN DD LMADI+ EY+ N  LF   A +WT+ YA
Sbjct:    6 RLKRELSLLS-SEPPPGITCW--QSGSRLDDLRAQILGAADTPYEKGIFNLEIVVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNISTLLTSIQLLMAEPNPDDPLMADISSEYKYNKQLFLINAKEWTEKYA 151          
BLAST of Gcaud7564.t1 vs. uniprot
Match: A0A226NHS8_CALSU (UBC core domain-containing protein n=3 Tax=Neognathae TaxID=8825 RepID=A0A226NHS8_CALSU)

HSP 1 Score: 187 bits (474), Expect = 2.340e-56
Identity = 87/153 (56.86%), Postives = 112/153 (73.20%), Query Frame = 0
Query:    8 RITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTPYERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQWTQLYAIPSK 160
            R++REL +L+     PGI+ W    G RLD L A+I GA+DTPYE+G+F LE+ +P  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ T+LTSIQ LM+ PN DD LMADI+ EY+ N  LF   A +WT+ YA   K
Sbjct:    6 RLSRELSMLST-EPPPGISCW--QSGARLDELRAQIIGAADTPYEKGIFNLEIVVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNISTLLTSIQLLMAEPNPDDPLMADISSEYKYNKQLFLLNAKEWTEKYASQQK 155          
BLAST of Gcaud7564.t1 vs. uniprot
Match: A0A7S4FAF6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FAF6_CHRCT)

HSP 1 Score: 187 bits (474), Expect = 2.490e-56
Identity = 93/156 (59.62%), Postives = 114/156 (73.08%), Query Frame = 0
Query:    1 MNSVANKRITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTPYERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQWTQLYA 156
            M  V + R+ +EL ++ R    PGI+AWA +E +    L+A I GA DTPY +G FRL+++IP  YPF+PP+V F+T IYHPN+DS GRICLD LNMPPKG WKPSLNV T+L+SIQ LMS PNADDGLM DITHEY  N A F RKA + T  +A
Sbjct:    1 MTHVGHLRLKKELNMMYR-EPPPGISAWANEEDS--SELEAVIEGADDTPYAKGRFRLKINIPPRYPFEPPKVHFVTPIYHPNIDSAGRICLDILNMPPKGAWKPSLNVSTMLSSIQLLMSHPNADDGLMLDITHEYMHNFAQFERKAAEHTLKHA 153          
BLAST of Gcaud7564.t1 vs. uniprot
Match: A0A8B9TPG1_ANAPL (Ubiquitin conjugating enzyme E2 T n=5 Tax=Anatidae TaxID=8830 RepID=A0A8B9TPG1_ANAPL)

HSP 1 Score: 186 bits (472), Expect = 3.660e-56
Identity = 88/153 (57.52%), Postives = 111/153 (72.55%), Query Frame = 0
Query:    8 RITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTPYERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQWTQLYAIPSK 160
            R+ REL LL+     PGI  W    G+RLD L A+I GA+DTPYE+G+F LE+ +P  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ T+LTSIQ LM+ PN DD LMADI+ EY+ N  LF   A +WT+ YA   K
Sbjct:    6 RLKRELSLLST-EPPPGITCW--QSGSRLDDLRAQILGAADTPYEKGIFNLEIVVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNISTLLTSIQLLMAEPNPDDPLMADISSEYKYNKQLFLINAKEWTEKYASQQK 155          
BLAST of Gcaud7564.t1 vs. uniprot
Match: A0A340X4J3_LIPVE (LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 T n=13 Tax=Odontoceti TaxID=9722 RepID=A0A340X4J3_LIPVE)

HSP 1 Score: 184 bits (468), Expect = 1.380e-55
Identity = 92/172 (53.49%), Postives = 120/172 (69.77%), Query Frame = 0
Query:    8 RITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTPYERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQWTQLYAIPSKTSQQRTETAPPEQHTSAEH 179
            R+ REL LLA     PGI  W   +G R++ L A+I G +DTPYERGVF+LE++IP  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ T+LTS+Q LM+ PN DD LMADI+ E++ N  +F   A QWT+ +A   K  ++ T   PPE   S  H
Sbjct:    6 RLKRELSLLA-AEPPPGITCW--QDGDRMEDLRAQILGGADTPYERGVFKLEVNIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTSVQQLMAEPNPDDPLMADISSEFKYNKPVFLXXARQWTEKHAR-QKADEEGTPDDPPETGDSEGH 173          
BLAST of Gcaud7564.t1 vs. uniprot
Match: A0A7K9VMK4_ANSSE (UBE2T enzyme (Fragment) n=6 Tax=Neognathae TaxID=8825 RepID=A0A7K9VMK4_ANSSE)

HSP 1 Score: 183 bits (464), Expect = 1.470e-55
Identity = 86/149 (57.72%), Postives = 109/149 (73.15%), Query Frame = 0
Query:    8 RITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTPYERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQWTQLYA 156
            R+ REL LL      PGI  W    G++LD L A+I GA+DTPYE+G+F LE+ +P  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ T+LTSIQ LM+ PN DD LMADI+ EY+ N  LF   A +WT+ YA
Sbjct:    6 RLKRELSLLTT-EPPPGITCW--QNGSQLDDLRAQILGAADTPYEKGIFNLEIVVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNISTLLTSIQLLMAEPNPDDPLMADISSEYKYNKQLFLINAKEWTEKYA 151          
The following BLAST results are available for this feature:
BLAST of Gcaud7564.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J409_9FLOR1.900e-9465.77Ubiquitin-conjugating enzyme E2 T n=1 Tax=Gracilar... [more]
R7Q2H8_CHOCR1.480e-7774.51UBC core domain-containing protein n=1 Tax=Chondru... [more]
A0A226NS10_COLVI1.970e-5756.05UBC core domain-containing protein n=7 Tax=Galloan... [more]
A0A7K9Y8U6_9GALL1.810e-5657.72UBE2T enzyme (Fragment) n=2 Tax=Galliformes TaxID=... [more]
A0A7K7LCM0_9AVES1.810e-5658.39UBE2T enzyme (Fragment) n=2 Tax=Neognathae TaxID=8... [more]
A0A226NHS8_CALSU2.340e-5656.86UBC core domain-containing protein n=3 Tax=Neognat... [more]
A0A7S4FAF6_CHRCT2.490e-5659.62Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A8B9TPG1_ANAPL3.660e-5657.52Ubiquitin conjugating enzyme E2 T n=5 Tax=Anatidae... [more]
A0A340X4J3_LIPVE1.380e-5553.49LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme ... [more]
A0A7K9VMK4_ANSSE1.470e-5557.72UBE2T enzyme (Fragment) n=6 Tax=Neognathae TaxID=8... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..157
e-value: 1.6E-52
score: 190.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..224
NoneNo IPR availablePANTHERPTHR24068:SF278UBIQUITIN-CONJUGATING ENZYME E2 Tcoord: 7..177
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 7..177
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..156
e-value: 2.8E-52
score: 178.6
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..158
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 8..150
e-value: 2.1E-39
score: 134.4
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 4..157
score: 47.374771
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..152
e-value: 3.98925E-56
score: 173.542
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 80..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1858_length_8045_cov_4.168972contigNODE_1858_length_8045_cov_4.168972:3267..3941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7564.t1Gcaud7564.t1Gracilaria caudata M_176_S67 malemRNANODE_1858_length_8045_cov_4.168972 3267..3941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7564.t1 ID=Gcaud7564.t1|Name=Gcaud7564.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=225bp
MNSVANKRITRELQLLARGSAAPGIAAWARDEGTRLDVLDAEITGASDTP
YERGVFRLELHIPREYPFKPPRVRFITKIYHPNVDSDGRICLDSLNMPPK
GVWKPSLNVPTILTSIQALMSTPNADDGLMADITHEYRTNPALFRRKAVQ
WTQLYAIPSKTSQQRTETAPPEQHTSAEHRSQPTSSPQRRDQRVPSQART
EPSTDAVAPPAPSLEPRLKKARTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS