Gcaud7415.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7415.t1
Unique NameGcaud7415.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length534
Homology
BLAST of Gcaud7415.t1 vs. uniprot
Match: A0A2V3IBS2_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBS2_9FLOR)

HSP 1 Score: 617 bits (1592), Expect = 4.160e-216
Identity = 340/542 (62.73%), Postives = 387/542 (71.40%), Query Frame = 0
Query:    1 MRAPSPFSWRRHRSSQPA-DAQSFSSESSSIPYHATPTAQLSTPTASTRDPPSTPTRSLSQPSTSRLPISRVLRRPVHPDSADVTRNSTNSRHSDVFPPQRLHAFEPYHPLSPPDSRRVSSAVTVTPPASFDVTSPPSPPS-------APLPMHPWRKGPAFRRKHNAHTKAAHPAPADPVFGVGQQKDDRPLREDGEQVLVKFLRSTLGPKAQGIAVRLVNKTPLPSQSAFTYVITQGSEDEDVDMLRAQLMSGRLLVVGMRYAATAWANLLLGDRFFVANNRQRHELVYRRSTCTCIICKVRATERPRSIDQADP-SGMSDDVSIMSTPAPLARTPSHSAMANFVVRFSLPDKTALSRIGASSSFRELEIGTVVRLNYRASAKLKLTDDVKELLGHLAYTGPISHEDMYRKVTTIGVHYYLYNKGKKERKVYIQGELVRLPINVGIIKLGTQPMYMPELGATFCLHRKQIMSIYVGEIVLEGNSVGSFIKTGIYYYIGFGEEKGVCPVYPNKTLGKARILGINELLLHHHMVDDLEVRCV 533
            MR+ S  SW R R  QP+ D  S S                     STRDPPS P RS S PS+S  P  +  +                         QRLH  EP+HP S  DSR ++S  T+TPP S D  SPP           +PL    WRK P FRRKH ++  A   A  DPVFG  +Q +DRP   DGEQ+L++ LR++LGPKAQ IAVRL NKTPL S S F+Y+I QGSEDEDVD++R QL+SGRL   GMR+AATAWANLLLGDRFF AN+RQRHELVYRRSTCTCIIC+VR+ + P S         +SD+ S +S    + RTPSHSAMANFVVR+ LP    L RIGASSS + LEIG+VVRLNYRASAKLKLTD+V+EL GHLAYTGPISHED+YRKVTTIGVHYYLYNKGKKERKVYIQG LVRLPINVG+IKLGTQPMYMPELGA +CLHRKQIMS+YVGEIVLEGNS  SFIKTGI++YIGFGEE+GVCPVYPNKTLGKAR LGINELLLHHHMVDDLEV+C+
Sbjct:    1 MRSASALSWLRPRRPQPSSDTHSISXXXXXXXXXXXXXXXXXXXXXSTRDPPSPPLRSSSHPSSS-YPARKTSKHRSSSXXXXXXXXXXXXXXXXXXXAQRLHPIEPHHPSSFADSRGLAS--TITPPHSIDAPSPPPTXXXXXXXXFSPL----WRKPPVFRRKHPSNM-AQPAATIDPVFGA-EQTEDRPPHSDGEQMLIRLLRTSLGPKAQAIAVRLANKTPLTSPSTFSYLICQGSEDEDVDIVRRQLVSGRLYPDGMRFAATAWANLLLGDRFFAANSRQRHELVYRRSTCTCIICRVRSAQPPSSASTPPHLPAVSDEESTVSVQPTIVRTPSHSAMANFVVRYRLPSIEQLERIGASSSSKVLEIGSVVRLNYRASAKLKLTDEVRELFGHLAYTGPISHEDVYRKVTTIGVHYYLYNKGKKERKVYIQGHLVRLPINVGVIKLGTQPMYMPELGAYYCLHRKQIMSVYVGEIVLEGNSFSSFIKTGIHFYIGFGEERGVCPVYPNKTLGKARKLGINELLLHHHMVDDLEVKCI 533          
BLAST of Gcaud7415.t1 vs. uniprot
Match: R7QSL7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSL7_CHOCR)

HSP 1 Score: 461 bits (1185), Expect = 1.630e-157
Identity = 230/332 (69.28%), Postives = 268/332 (80.72%), Query Frame = 0
Query:  213 VNKTPLPSQSAFTYVITQGSEDEDVDMLRAQLMSGRLLVVGMRYAATAWANLLLGDRFFVANN-RQRHELVYRRSTCTCIICKVRATERPRSIDQADPS----------GMSDDVSIMSTPAPLARTPSHSAMANFVVRFSLPDKTALSRIGASSSFRELEIGTVVRLNYRASAKLKLTDDVKELLGHLAYTGPISHEDMYRKVTTIGVHYYLYNKGKKERKVYIQGELVRLPINVGIIKLGTQPMYMPELGATFCLHRKQIMSIYVGEIVLEGNSVGSFIKTGIYYYIGFGEEKGVCPVYPNKTLGKARILGINELLLHHHMVDDLEVRCV 533
            +NKTP+ + +AF+YVI Q +ED D+D++R  L SGRL   G+R  A AW NLLLGDRF    + RQRHEL YRRS+C+CI+C+VR TE      QA  +          G+S +  ++ST +  +RTP+HSAMANFVV+  LP   AL  IGASSS RELEIG+VVRLNYRASAK K T++V EL GHLAYTGPISHE++YR+VTTIGVHYYLYNKGKKERKVYIQG+L+RLP+ VG++KLGTQPMY  ELGATFCLHRKQIMSIYVGEIVLEGNS+GSFIKTGI YYIGFGEE+GVCPVYPNK LGKAR LGINELLLHHHMVDDLEVRC+
Sbjct:    1 MNKTPITTGAAFSYVIHQATEDSDLDIIRRDLSSGRLYQAGVRMVAGAWCNLLLGDRFQPGTHPRQRHELTYRRSSCSCILCRVRLTELVDQQMQASSTREQTSETTSTGLSAE--LLSTMSSASRTPTHSAMANFVVKCRLPSNEALRSIGASSSSRELEIGSVVRLNYRASAKFKFTEEVSELFGHLAYTGPISHEEVYRRVTTIGVHYYLYNKGKKERKVYIQGQLIRLPVQVGVVKLGTQPMYFDELGATFCLHRKQIMSIYVGEIVLEGNSLGSFIKTGIRYYIGFGEERGVCPVYPNKALGKARKLGINELLLHHHMVDDLEVRCL 330          
BLAST of Gcaud7415.t1 vs. uniprot
Match: A0A2V3IQJ0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQJ0_9FLOR)

HSP 1 Score: 399 bits (1024), Expect = 4.780e-132
Identity = 191/358 (53.35%), Postives = 266/358 (74.30%), Query Frame = 0
Query:  178 QQKDDRPLREDGEQVLVKFLRSTLGPKAQGIAVRLVNKTPLPSQSAFTYVITQGSEDEDVDMLRAQLMSGRLLVVGMRYAATAWANLLLGDRFFVANNRQR-HELVYRRSTCTCIICKVRA---TERPRSIDQADPSGMSDDVSIMSTPAPLARTPSHSAMANFVVRFSLPDKTALSRIGASSSFRELEIGTVVRLNYRASAKLKLTDDVKELLGHLAYTGPISHEDMYRKVTTIGVHYYLYNKGKKERKVYIQGELVRLPINVGIIKLGTQPMYMPELGATFCLHRKQIMSIYVGEIVLEGNSVGSFIKTGIYYYIGFGEEKGVCPVYPNKTLGKARILGINELLLHHHMVDDLEVR 531
            +QK    +RE+GEQ+L+ F+R+ LG +A+G+A+RL+NK P+   S F+Y I Q +E+ D+ ++   L+SGRL   G +Y A  WANLL GD+F  + NR++ HEL Y R++CTC++C +     +E    +   D     D  S  ST +  +  P +SAMANFV  + +P    L +IG  +S+RELEIGT+VRLN RA+AKL+ T+D+K+L  HL+Y+GPISHE +YRKVTT+GV+YYLYNKGKKERKVY+QG+LV++P+ +G++KLGT P+Y+ E+GA + L+++Q+M IYVGE+VLEGNS GSFI TGI Y++G GE+ G CPVY NK+LGK R LG+NELLLHHHMVDDL++R
Sbjct:   52 KQKQGASVRENGEQLLLSFIRNRLGLQAEGLAIRLMNKNPIKDGSVFSYEINQTTEESDLQIICRDLLSGRLYRSGAKYVAPQWANLLFGDKFASSTNRRQVHELTYVRTSCTCLVCLINMESMSENKTGVPLDD-----DTKSFSSTTS--SYVPENSAMANFVRPYPIPSANDLKKIGGLASWRELEIGTIVRLNSRAAAKLRFTEDMKQLFAHLSYSGPISHEALYRKVTTMGVNYYLYNKGKKERKVYLQGDLVQVPLEMGVVKLGTSPLYLEEVGAYYILYKRQVMKIYVGELVLEGNSFGSFIPTGIKYFVGIGEDGGCCPVYSNKSLGKPRRLGLNELLLHHHMVDDLKIR 402          
The following BLAST results are available for this feature:
BLAST of Gcaud7415.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IBS2_9FLOR4.160e-21662.73Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
R7QSL7_CHOCR1.630e-15769.28Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IQJ0_9FLOR4.780e-13253.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_10_length_87931_cov_4.732901contigNODE_10_length_87931_cov_4.732901:11659..13260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7415.t1Gcaud7415.t1Gracilaria caudata M_176_S67 malemRNANODE_10_length_87931_cov_4.732901 11659..13260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7415.t1 ID=Gcaud7415.t1|Name=Gcaud7415.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=534bp
MRAPSPFSWRRHRSSQPADAQSFSSESSSIPYHATPTAQLSTPTASTRDP
PSTPTRSLSQPSTSRLPISRVLRRPVHPDSADVTRNSTNSRHSDVFPPQR
LHAFEPYHPLSPPDSRRVSSAVTVTPPASFDVTSPPSPPSAPLPMHPWRK
GPAFRRKHNAHTKAAHPAPADPVFGVGQQKDDRPLREDGEQVLVKFLRST
LGPKAQGIAVRLVNKTPLPSQSAFTYVITQGSEDEDVDMLRAQLMSGRLL
VVGMRYAATAWANLLLGDRFFVANNRQRHELVYRRSTCTCIICKVRATER
PRSIDQADPSGMSDDVSIMSTPAPLARTPSHSAMANFVVRFSLPDKTALS
RIGASSSFRELEIGTVVRLNYRASAKLKLTDDVKELLGHLAYTGPISHED
MYRKVTTIGVHYYLYNKGKKERKVYIQGELVRLPINVGIIKLGTQPMYMP
ELGATFCLHRKQIMSIYVGEIVLEGNSVGSFIKTGIYYYIGFGEEKGVCP
VYPNKTLGKARILGINELLLHHHMVDDLEVRCV*
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