Gcaud7377.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7377.t1
Unique NameGcaud7377.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length413
Homology
BLAST of Gcaud7377.t1 vs. uniprot
Match: A0A2V3J235_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J235_9FLOR)

HSP 1 Score: 542 bits (1396), Expect = 3.550e-190
Identity = 248/362 (68.51%), Postives = 307/362 (84.81%), Query Frame = 0
Query:   51 TGAGATKTYMFTNLHWWESVDHQLTTIATLLALAQNTSSVAVVPPFPSKESSLNSNKSLLGDFFDIAPVRRLQPVITLADFLKSDEYQMLKAEKTGSVPFPKVSQEEYEAHLKVFGHLQTSHIALSMPSIDPENTSQRCDRFGGTVHVSADGKTRFVFLDRIHFLHFCTEKFMPWWYTIRHRISPKQPYLQVANRYLAKSIRPVTVIHVNDVLEHQKEREAEEIERYARQIVDSLRNNQAISGTLYIISAKQGKNVNKVIGLLREEFENVHDCSQIYNCLSEINRGIFFDTLSETEFHTLFKSDDSLKMLEWSLGSQADLFIGNIYSPFSRNICLHRKLHGLAYSALRGFSELRKVWAWNLL 412
            T   ATKTY+ TNLHWWES DHQLTTI TLL+LAQNTSS+AV+PPFP K++S NSNKSL+GDFFDI  ++++Q  +T ADFLKSDEY+ LKAE+TG+VP PK SQEEYE  L+ +G LQ + +ALSMP IDPENTSQ+C+RFGGT+HVSADG+TRFVFLDRIHFLHFCTEKFMPWWYTIRHRI P+ P+ +VA+RY++   +P +V+H+NDVLE QKER  EE+ERYARQIVD+LR +QA+SGTLYI+SAK G NV +V+ LL+EEFEN+HDC+ ++NCL+EI R +F   L E EF +LFKS+ SLK +EW+LG++A LF+GNI+SPFSRNICL+RK+HG  YS L+GF ELRKVW WNL+
Sbjct:   51 TWKNATKTYILTNLHWWESTDHQLTTIITLLSLAQNTSSIAVIPPFPGKDASRNSNKSLIGDFFDITGIKQVQSALTFADFLKSDEYRQLKAEQTGTVPLPKGSQEEYELRLQFYGRLQDTSVALSMPPIDPENTSQKCNRFGGTIHVSADGRTRFVFLDRIHFLHFCTEKFMPWWYTIRHRIEPRAPFFEVADRYMSDKTKPFSVVHLNDVLELQKERGEEEVERYARQIVDALRKHQALSGTLYIVSAKDGNNVKQVVKLLKEEFENIHDCTTVFNCLAEIPRDVFRTVLPENEFDSLFKSESSLKHVEWALGARAQLFVGNIHSPFSRNICLYRKMHGAPYSMLKGFGELRKVWTWNLI 412          
BLAST of Gcaud7377.t1 vs. uniprot
Match: A0A1X6PKL0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKL0_PORUM)

HSP 1 Score: 255 bits (652), Expect = 2.720e-78
Identity = 140/367 (38.15%), Postives = 218/367 (59.40%), Query Frame = 0
Query:   72 HQLTTIATLLALAQ-NTSSVAVVPPFPSKESSLNS------NKSLLGDFFDIAPVRRLQPVITLADFLK--SDEYQMLKAEKTGSVPFPKVSQEEYEAHLKVFGHLQTSHIALSMPSIDPENTSQRCDRFGGTVHV--SADGKT---RFVFLDRIHFLHFCTEKFMPWWYTIRHRISPKQPYLQVANRYLAKSIRPVTVIHVNDVLEHQKEREAEEIERYARQIVDSLRNNQA-------------ISGTLYIISAKQGKNVNKVIGLLREEFENVHDCSQIYNCLSEINRGIFFDTLSETEFHTLFKSDDSLKMLEWSLGSQADLFIGNIYSPFSRNICLHRKLHGLAYSALRGFSELRKVWAWNL 411
            +QLTT+ T LA+A+   ++V V+PP     + L S      + +L GD++D+  ++ +Q V+TL +FL   S     L     G++  PK SQE+YE  L + G L  + I++ +P  D E T Q CD   G+V+   + DG     + VFLDR+HF HFCTEKF+PWWY +R  + P+  Y    + + A    P+TVIH+ D+++ Q+ER+ E+++RYARQ+VD+LR+ Q+              +G+LY+     GKNV +V  L REEF  V+ C  +Y C + +   +  D  S+ E  +LF+S  +  ++E +L   AD F+GN+YS +SRN+ L RK+HG +YS ++GF E+R++W W L
Sbjct:    4 NQLTTLTTGLAVAKLYPNAVVVLPPAVGVPARLPSPGGAARHITLFGDYYDLPKLKAVQRVMTLDEFLAPGSQTAAGLAMVPPGTLQLPKASQEDYEKSLNLLGDLSDTRISVPLPHEDLERTEQYCDSLPGSVYPVPAGDGGLSAFQLVFLDRLHFFHFCTEKFVPWWYDVRQHLQPRPEYFAAVSAWRATITGPLTVIHLRDLMDGQRERDEEDVQRYARQVVDALRHTQSGGSARPVGVQADLAAGSLYLSYPPSGKNVGRVAALFREEFPRVYTCKDVYECGAGVTATMAGDGPSDIE--SLFQSPHAATVMETALSMSADHFVGNVYSSYSRNVGLWRKMHGKSYSIVKGFGEMRRIWTWQL 368          
The following BLAST results are available for this feature:
BLAST of Gcaud7377.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J235_9FLOR3.550e-19068.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PKL0_PORUM2.720e-7838.15Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 260..287
NoneNo IPR availableGENE3D3.40.50.11350coord: 228..397
e-value: 7.7E-8
score: 34.2
IPR019378GDP-fucose protein O-fucosyltransferasePFAMPF10250O-FucTcoord: 75..389
e-value: 7.9E-9
score: 35.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_85_length_54060_cov_4.846356contigNODE_85_length_54060_cov_4.846356:51151..52597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7377.t1Gcaud7377.t1Gracilaria caudata M_176_S67 malemRNANODE_85_length_54060_cov_4.846356 51151..52597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7377.t1 ID=Gcaud7377.t1|Name=Gcaud7377.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=413bp
MHFVSNSQISAEHFVMRVLIVKARLCLTSNGHRFFLPYISLRQLQPLALG
TGAGATKTYMFTNLHWWESVDHQLTTIATLLALAQNTSSVAVVPPFPSKE
SSLNSNKSLLGDFFDIAPVRRLQPVITLADFLKSDEYQMLKAEKTGSVPF
PKVSQEEYEAHLKVFGHLQTSHIALSMPSIDPENTSQRCDRFGGTVHVSA
DGKTRFVFLDRIHFLHFCTEKFMPWWYTIRHRISPKQPYLQVANRYLAKS
IRPVTVIHVNDVLEHQKEREAEEIERYARQIVDSLRNNQAISGTLYIISA
KQGKNVNKVIGLLREEFENVHDCSQIYNCLSEINRGIFFDTLSETEFHTL
FKSDDSLKMLEWSLGSQADLFIGNIYSPFSRNICLHRKLHGLAYSALRGF
SELRKVWAWNLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019378GDP-Fuc_O-FucTrfase