Gcaud7364.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7364.t1
Unique NameGcaud7364.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length741
Homology
BLAST of Gcaud7364.t1 vs. uniprot
Match: A0A2V3IZ98_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ98_9FLOR)

HSP 1 Score: 1087 bits (2811), Expect = 0.000e+0
Identity = 547/671 (81.52%), Postives = 610/671 (90.91%), Query Frame = 0
Query:   74 STPRRLVTDTSQRAHFVRALLPPPSSHMLHHNCASITQFLRPVTLPIDCVPDAADPSFKAHSSLLRKIALHHFELNRYLFAYKPLARVHAVMAATLLSPAHIDSNTFPMSSLLRTAVMYLAGNSYRNVYVMTYAAQLKSIHRSTPPAQGIMPSVLLKGHHLPKSELLALDFAQQMLSDEYAVSEAISKRFIDMHANEVCAVDRYVAATCAYGAFLSTLTSPLDLELTHAAIQYASTNLQGLPWKSSAAPLNVGFTDDDLGNFGSSAHHSTFGARVKPMKERFSLHNNYHRHHQ---NGKSRPRAIRKVSHFLSHSIMAPKIIADVNRVTENWMSNAHVPSPGQLFETNDFISHIFGFEPFYFSTQAMAGEAMRRAFLYGCTELLFGERDIPRRLKFILCYVLSSGKERRRIDTDHTKSFETQGLHNGRSITSVYKQRPYDALSIMSAHAAYLACKYGSCAAELVAATDVSRVRSAMERYQNRSDLNMHTRLVDFPLPKRDCAAILLAHALLRESPCISEAELLAFESSFG-SAKDADQASRNSRRAFLEVLGTACMWGSLERYATGVLAFDIDCTSNLVFAMGRAEPTITEFCQSVEGKKIGLSLAVGDDGKLVRNRSDPKATRAQSLRSATRSKKRLHRKRTSSVLSSGLRVARMFSTDELRTKESPAVA 740
            STPRRLVTDTS RAHFVRALLPPPSSHMLH NCASITQFLRP+TLPI CVPDAAD SFK H++LLR+  LHHFELNRYLFAYKPLARV+AVMAATLL PA ID+N FP+SSLLRTAVMYLAGNSYRNVYVMTYAAQLKSIHRSTPPA+GIMPS+LL+G HL  S+L+ALDFAQQMLSD+YAVSE +S+  ID+  +E   +DRYVAATCAYGAFLS LTS LDLELTHAAIQYAS NLQGLPWKSS AP+NVGFTDD++ +FG++  HSTFG++ +P ++RFSLHNNYHRH +   NGK+RP+AIRKVSHFLS SI+APKIIADVNRVTENWMSNAH+P PGQLF+ NDFI+HIFGFEPFYFST AMAGE+MRRAFLYGCTELLFGERDIPRRLKFI+CYVLSSGKERRRID DHTKSFE QG+HNGRSITSVY QRPYDALSIMSAHAAYLACKYGSCAAELVAA+DVSRVRSAM+RYQ   D ++HTRLVDFPLP+RDCAAILLAH+LL+ESPCIS+ +LLAFE+SFG   K+++Q    SRRAFLEVLGTACMW SLERYATGVLAFDIDC+SNLVF MGRAEPTITEFC+SVEGK+IGLSLAVGD+ KL+R RSDPKATR QSLRS  RS+KRLHRKRTSSVLS+GLR+ARMFS+D+LR+KES AVA
Sbjct:   84 STPRRLVTDTSTRAHFVRALLPPPSSHMLHPNCASITQFLRPITLPIACVPDAADTSFKPHATLLRRTTLHHFELNRYLFAYKPLARVNAVMAATLLYPAQIDTNNFPVSSLLRTAVMYLAGNSYRNVYVMTYAAQLKSIHRSTPPAEGIMPSMLLEGSHLSPSQLIALDFAQQMLSDDYAVSETVSRSIIDVQPSENTMLDRYVAATCAYGAFLSCLTSTLDLELTHAAIQYASNNLQGLPWKSSGAPVNVGFTDDEIDHFGTATTHSTFGSKYRPKRDRFSLHNNYHRHTRSPSNGKTRPKAIRKVSHFLSCSILAPKIIADVNRVTENWMSNAHLPPPGQLFDANDFIAHIFGFEPFYFSTLAMAGESMRRAFLYGCTELLFGERDIPRRLKFIICYVLSSGKERRRIDRDHTKSFERQGVHNGRSITSVYSQRPYDALSIMSAHAAYLACKYGSCAAELVAASDVSRVRSAMDRYQVHPDASIHTRLVDFPLPRRDCAAILLAHSLLQESPCISDVDLLAFENSFGVGPKESEQGGTASRRAFLEVLGTACMWSSLERYATGVLAFDIDCSSNLVFGMGRAEPTITEFCKSVEGKRIGLSLAVGDEDKLMRARSDPKATRTQSLRSGIRSRKRLHRKRTSSVLSTGLRMARMFSSDDLRSKESQAVA 754          
BLAST of Gcaud7364.t1 vs. uniprot
Match: R7QVB8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVB8_CHOCR)

HSP 1 Score: 727 bits (1877), Expect = 6.150e-254
Identity = 373/653 (57.12%), Postives = 487/653 (74.58%), Query Frame = 0
Query:   79 LVTDTSQRAHFVRALLPPPSSHMLHHNCASITQFLRPVTLPIDCVPDAADPSFKAHSSLLRKIALHHFELNRYLFAYKPLARVHAVMAATLLSPAHIDSNTFPMSSLLRTAVMYLAGNSYRNVYVMTYAAQLKSIHRSTPPAQGIMPSVLLKGHHLPKSELLALDFAQQMLSDEYAVSEAISKRFIDMHANEVCAVDRYVAATCAYGAFLSTLTSPLDLELTHAAIQYASTNLQGLPWKSSAAPLNVGFTDDDLGNFGSSAHHSTFGARVKPMKERFSLHNNYHRHHQN-GKSRPRAIRKVSHFLSHSIMAPKIIADVNRVTENWMSNAHVPSPGQLFETNDFISHIFGFEPFYFSTQAMAGEAMRRAFLYGCTELLFGERDIPRRLKFILCYVLSSGKERRRI-DTDHTKSFETQGLHNGRSITSVYKQRPYDALSIMSAHAAYLACKYGSCAAELVAATDVSRVRSAMERYQNRSDLNMHTRLVDFPLPKRDCAAILLAHALLRESPCISEAELLAFESSF-GSAKDADQASRNSRRAFLEVLGTACMWGSLERYATGVLAFDIDCTSNLVFAMGRAEPTITEFCQSVEGKKIGLSLAVGDDGKLVRNRSDPKATRAQSLRSATRSKKRLHRKRTSSVLSSGLRVARMFST 728
            + +D+S++   VR L P P   MLH NCAS+T FLR   +P+ C P++ D +FKAH+SL+RK  L  F+LNRYLFAYKPLAR +AV+A+ LLS   ID   FP+S  LR+AVMY+AGN++ +V+VMTYAAQLKSI RS PP +GI+P+++L+G HL   E+ ALDFAQ++      VSE+  +R I+  A     ++R V++  +Y AFL+ LTS +D+ L H +I YA+ NL  LPWKSS AP+NVGF DD++G+FG S   S F ++ +P +ER SL+ +Y RHH++  +SR R IR+VS F + SIM PK + DVNR+TE+WM  A VP  G+LF+ ND I  +FGF PFYFST AM  E++RRAFL+G  ELLF E+++PRRLKF+LCYVLSSGKER+RI D++H+KSF+ QG+HNG SITSVY QR YD+LSIMSAHAA+LACKYG+  AELVAA+D SRVRSAMERY      N  +R + FPL +RDCAAIL+ H+L++ +P ISE +L +FES+F G  KD + +SR SRRA +EVLGTA MW + ERYATG LAFDIDCTSN+VF  GRAEPTI+EFC+  EG+KIGLSLA  +   ++R RS+ KA+R  SLR  T+S + L+RKRTSS LSS  R+ R+FS+
Sbjct:    2 MTSDSSRKRRPVRPLSPAPRPAMLHKNCASVTDFLRSAAVPVGCQPESVDTAFKAHTSLMRKSTLDSFDLNRYLFAYKPLARANAVLASALLSIVEIDQKHFPLSPALRSAVMYVAGNAHHSVFVMTYAAQLKSIMRSRPPTEGILPAIVLEGRHLTDKEIAALDFAQELSGANAVVSESTRRRVINGDAESDGRLERLVSSASSYAAFLACLTSTVDMALPHGSITYATKNLDCLPWKSSGAPVNVGFLDDEMGDFGLSTAPSGFSSKYRPKRERLSLNRHYDRHHRDRSRSRHRGIRRVSQFFAASIMGPKTVTDVNRITESWMKTAGVPPSGRLFDINDEICSLFGFHPFYFSTAAMERESVRRAFLFGAKELLFSEKEVPRRLKFLLCYVLSSGKERQRIVDSEHSKSFQKQGVHNGHSITSVYSQRQYDSLSIMSAHAAFLACKYGASPAELVAASDASRVRSAMERYDLDPAKNWSSRTIGFPLVRRDCAAILIVHSLMQATPVISERDLRSFESAFAGQTKDPEYSSRPSRRALMEVLGTASMWSAFERYATGTLAFDIDCTSNMVFGNGRAEPTISEFCRGNEGRKIGLSLATSECRDVMRVRSESKASRQSSLRPTTKSARNLYRKRTSSALSSTSRMGRIFSS 654          
The following BLAST results are available for this feature:
BLAST of Gcaud7364.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IZ98_9FLOR0.000e+081.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QVB8_CHOCR6.150e-25457.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 684..705
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..740
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_85_length_54060_cov_4.846356contigNODE_85_length_54060_cov_4.846356:16397..18619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7364.t1Gcaud7364.t1Gracilaria caudata M_176_S67 malemRNANODE_85_length_54060_cov_4.846356 16397..18619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7364.t1 ID=Gcaud7364.t1|Name=Gcaud7364.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=741bp
MRSRVSNMHHHARSVRPAASAPALSQALSSSTSLSSATVATASTVPRRPD
SAQARSLPREPAPESRLPSVDDSSTPRRLVTDTSQRAHFVRALLPPPSSH
MLHHNCASITQFLRPVTLPIDCVPDAADPSFKAHSSLLRKIALHHFELNR
YLFAYKPLARVHAVMAATLLSPAHIDSNTFPMSSLLRTAVMYLAGNSYRN
VYVMTYAAQLKSIHRSTPPAQGIMPSVLLKGHHLPKSELLALDFAQQMLS
DEYAVSEAISKRFIDMHANEVCAVDRYVAATCAYGAFLSTLTSPLDLELT
HAAIQYASTNLQGLPWKSSAAPLNVGFTDDDLGNFGSSAHHSTFGARVKP
MKERFSLHNNYHRHHQNGKSRPRAIRKVSHFLSHSIMAPKIIADVNRVTE
NWMSNAHVPSPGQLFETNDFISHIFGFEPFYFSTQAMAGEAMRRAFLYGC
TELLFGERDIPRRLKFILCYVLSSGKERRRIDTDHTKSFETQGLHNGRSI
TSVYKQRPYDALSIMSAHAAYLACKYGSCAAELVAATDVSRVRSAMERYQ
NRSDLNMHTRLVDFPLPKRDCAAILLAHALLRESPCISEAELLAFESSFG
SAKDADQASRNSRRAFLEVLGTACMWGSLERYATGVLAFDIDCTSNLVFA
MGRAEPTITEFCQSVEGKKIGLSLAVGDDGKLVRNRSDPKATRAQSLRSA
TRSKKRLHRKRTSSVLSSGLRVARMFSTDELRTKESPAVA*
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