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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR013087 | Zinc finger C2H2-type | SMART | SM00355 | c2h2final6 | coord: 255..278
e-value: 0.067
score: 22.3
coord: 315..340
e-value: 1.6
score: 17.8
coord: 284..307
e-value: 2.2
score: 17.3 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS00028 | ZINC_FINGER_C2H2_1 | coord: 257..278 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS00028 | ZINC_FINGER_C2H2_1 | coord: 317..340 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS00028 | ZINC_FINGER_C2H2_1 | coord: 286..307 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS50157 | ZINC_FINGER_C2H2_2 | coord: 255..283
score: 10.05518 |
| None | No IPR available | GENE3D | 3.30.160.60 | Classic Zinc Finger | coord: 249..340
e-value: 5.5E-7
score: 31.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 91..121 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 39..69 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 372..403 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 380..403 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..153 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 76..90 |
| IPR036236 | Zinc finger C2H2 superfamily | SUPERFAMILY | 57667 | beta-beta-alpha zinc fingers | coord: 256..304 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud7352.t1 ID=Gcaud7352.t1|Name=Gcaud7352.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=404bp
MLKDPLEDTEAVTPDSPDVGRPEQRSSATNRSKRNKKRKRRDEDQNQPPK
RRFVEPEVENEDWTKLGNYFDEEVEGPALSTDREDEQSSSAEETQGSAQT
EGQQAETRSVPTTQEAQDDADEPTASSLPLHALGGGASTEHKQRVQQPQR
LGLVGESAAPNVLTSSVGVGAAPIVQSSAFGVGAAPNVQASAAGVGAAPY
AQAPAVNAGARPSAQTPAEDVSAPRYGQPVGRLLKLRGRDEHPNVPNLIV
QQAHIECQQCGKHFGSELAVERHTLRVHKTEGTFQCRHCPLKLKSELNRK
KHEKTQHDCDGRQRIECDVEGCTAFFNKPINLTSHKKQFHGALFRDRTEE
NKGNERSVYACHFLRRQEPAIDRDSMGKLNQAHGVQNRTTSMPSISLVPN
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Annotated Terms
The following terms have been associated with this polypeptide:
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