Gcaud7329.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7329.t1
Unique NameGcaud7329.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length67
Homology
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BLAST of Gcaud7329.t1 vs. uniprot
Match: A0A1X6P805_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P805_PORUM)

HSP 1 Score: 62.8 bits (151), Expect = 1.120e-11
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0 
Query:   11 NQVSATKEILMGAVIAISGGFVWRAWHLSYKASVDEYYKNLAAEQAAEEA 60
             +VSATKEIL+GA +A+  G VWRAWH  YKA++DE+Y    AEQ A+ A
Sbjct:   12 KKVSATKEILLGAALALGAGGVWRAWHTGYKANIDEWYVKYEAEQRAKNA 61
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BLAST of Gcaud7329.t1 vs. uniprot
Match: A0A2V3IMZ2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMZ2_9FLOR)

HSP 1 Score: 52.0 bits (123), Expect = 1.140e-7
Identity = 20/31 (64.52%), Postives = 27/31 (87.10%), Query Frame = 0 
Query:   27 ISGGFVWRAWHLSYKASVDEYYKNLAAEQAA 57
            + GG VWR+WH+SYK ++D+YYK LAAE+AA
Sbjct:    1 MQGGMVWRSWHISYKGAIDDYYKKLAAEEAA 31
The following BLAST results are available for this feature:
BLAST of Gcaud7329.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1X6P805_PORUM1.120e-1158.00Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3IMZ2_9FLOR1.140e-764.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 19..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..18
NoneNo IPR availableTMHMMTMhelixcoord: 19..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1722_length_8807_cov_4.324002contigNODE_1722_length_8807_cov_4.324002:805..1105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7329.t1Gcaud7329.t1Gracilaria caudata M_176_S67 malemRNANODE_1722_length_8807_cov_4.324002 805..1105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7329.t1 ID=Gcaud7329.t1|Name=Gcaud7329.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=67bp
MAGGVVRVAANQVSATKEILMGAVIAISGGFVWRAWHLSYKASVDEYYKN
LAAEQAAEEAAASSSS*
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