Gcaud7304.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7304.t1
Unique NameGcaud7304.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length326
Homology
BLAST of Gcaud7304.t1 vs. uniprot
Match: A0A2V3J295_9FLOR (Methyltransf_21 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J295_9FLOR)

HSP 1 Score: 410 bits (1053), Expect = 7.440e-141
Identity = 197/317 (62.15%), Postives = 244/317 (76.97%), Query Frame = 0
Query:    7 FLVATMSACVLCAYAVPASLPHLREKRVYSTNMLPAFKKDNPQLFPPGLLHKHAKHMLVLDIGANNGDSYTLTAAQHGHPVIAFEPSPIVNSLFQKVMRQHKVPLSVYNFTSGQHS--QQYSASKPSKLSSNNVFLIPVALSNTTTVLNFHQSPCSDLQKCGKINHLAPDSNAKTAVKVPVYRLDDVPLPADPKNIWFMKIDVEGYELQVLKGARKLISHAKIPYISIEFAPHGKNGTQWGVDLLEELYRQGYSCHHLRGFGRCHDRQFRSPSLKCNYPFSLHDWKNAPTFEEYTETFEMRADRHKKSSLADLMCIR 321
            F+ A   + V+   A+P     LR+KRV++TN+L  FKKD+PQLFPPGL  K+A  M+VLDIGANNGDSYTL A + GH V+AFEPSP+V  LF+ VM +++V L+V N ++G  S  Q  +AS       N V+LIP ALS  TT+LN HQSPCSD +KCGKIN L  DS +K  VKVPVYRLDD+  P DP+ +WFMKIDVEG+EL+VL+GAR  I  AKIPYI +EFA HG+ G QWGVDLLEEL++Q YSC+HLRGFG+CHDR+ RSPSLKCNYPFS++DWK APTFEEY ETFE+ A+R KK+SL+D+MC+R
Sbjct:    4 FIAAIFLSLVIAIAAIPLPFAALRQKRVFTTNVLDGFKKDHPQLFPPGLGSKNASRMVVLDIGANNGDSYTLRAYKEGHTVVAFEPSPMVKDLFKDVMNENRVRLTVVNGSTGVPSKAQGVTASSLKIGDRNKVYLIPAALSKKTTILNLHQSPCSDKRKCGKINRLVEDSKSKNIVKVPVYRLDDISFPVDPEKVWFMKIDVEGHELEVLQGARNFIKSAKIPYIGLEFAAHGRAGIQWGVDLLEELHKQQYSCYHLRGFGKCHDREHRSPSLKCNYPFSVNDWKQAPTFEEYAETFEISANRPKKASLSDIMCVR 320          
BLAST of Gcaud7304.t1 vs. uniprot
Match: L1JNG8_GUITC (Methyltransf_21 domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JNG8_GUITC)

HSP 1 Score: 74.3 bits (181), Expect = 2.300e-11
Identity = 74/274 (27.01%), Postives = 123/274 (44.89%), Query Frame = 0
Query:   51 FPPGLLHKHAKHMLVLDIGANNGDSYTLTAAQHGHPVIAFEPSPIVNSLFQKVMRQHKVP--LSVYNFTSGQHSQQYSASKPSKLSSNNVFLIPVALSNTTTVLNFHQSPCSDLQKCGKINHLAPDSNAK-TAVKVPVYRLDDVPLPADPKNIWFMKIDVEGYELQVLKGARKLISHAKIPYISIEFAPH-GKNGTQWGVDLLEELYRQGYSCHHLRGFGRCHDRQFRSPSLKCNYPFSLHDWKNAPTFEEYTETFEMRADRHKKSSLADLMCI 320
            FPPG         LV+D+GA +G    +  A  GH V++FEP+P  ++  ++ +R   +   ++ Y +     S +             V  + V L N    +N  +    +     +     P S+   T V V V +LD+V +P D K + FMK+D +G++ +VLKGA +L+S  ++   S E +P   + G + G+D+L  +  +GY C+       CH             PFS+  W    T    T  FE R   H +    D++C+
Sbjct:   81 FPPG--------QLVIDVGAYDGKE-AIEYASAGHNVLSFEPTPSKSANIKRKIRNADLEDKITFYPWAVSDRSGEAPF----------VVNVGVHLENGKWAINEGEEKNPETMGSEQDGFRVPWSHENSTTVNVKVEKLDNV-VPRD-KFVLFMKVDSQGHDFKVLKGADRLLSEHRVAVFSAEISPGLMEGGAKEGLDMLNYIASKGYRCYG------CHTSFETGFRFGLPVPFSM--W----TQHLGTLKFEHRGANHGQWD--DIVCV 319          
BLAST of Gcaud7304.t1 vs. uniprot
Match: A0A4Y4AYV6_9FLAO (Methyltransf_21 domain-containing protein n=1 Tax=Flavobacterium flevense TaxID=983 RepID=A0A4Y4AYV6_9FLAO)

HSP 1 Score: 67.0 bits (162), Expect = 4.940e-9
Identity = 56/179 (31.28%), Postives = 84/179 (46.93%), Query Frame = 0
Query:   55 LLHKHAKHMLVLDIGANNGDSYTLTAAQHGHPVIAFEPSPIVNSLFQKVMRQHKVPLSVYNFTSGQHSQQYSASKPSKLSSNNVFLIPVALSNTTTVLNFHQSPCSDLQKCGKINHLAPDSNAKTAVKVPVYRLDDVPLPADPKNIWFMKIDVEGYELQVLKGARKLISHAKIPYISIE 233
            L+H   ++ L +DIGAN G    L A      VIAFEP P+  +  +K +  +K+                         S  V L  + +    ++LNF  +   D+     +N +A +   +  V V V +LDD+P     KN  F+KIDVEGYE  VLKGA K++   ++ +I IE
Sbjct:   84 LIHNLKENELFVDIGANVGHFSLLAAGICKAQVIAFEPIPLTFNKLKKNIDLNKL-------------------------SEKVSLFKIGIGEENSLLNF--TTTKDV-----MNGVAMEYETEV-VSVEVKKLDDIPTV---KNATFLKIDVEGYEFFVLKGASKVLKSEELKFIIIE 226          
BLAST of Gcaud7304.t1 vs. uniprot
Match: A0A255Z6Q8_9PROT (Methyltransf_21 domain-containing protein n=2 Tax=Niveispirillum lacus TaxID=1981099 RepID=A0A255Z6Q8_9PROT)

HSP 1 Score: 66.2 bits (160), Expect = 6.000e-9
Identity = 60/209 (28.71%), Postives = 92/209 (44.02%), Query Frame = 0
Query:   65 VLDIGANNGDSYTLTAAQHGHPVI-AFEPSPIVNSLFQKVMRQHKVPLSVYNFTSGQHSQQYSASKPSKLSSNNVFLIPVALSNTTTVLNFHQSPCSDLQKCGKINHLAPDSNAKTAVKVPVYRLDDVPLPADPKNIWFMKIDVEGYELQVLKGARKLISHAKIPYISIEFAPHGKNGTQWGVDLLEELYRQGYSCHHLRGFGRCHDRQ 272
            V+D GAN G    L    H   VI AFEP P   ++F ++  Q +  + ++    G  + +       +  S++  L+P++ S T                       AP +     + VPV RLDDV   AD      +KIDV+G EL VLKGA  L+ H    Y+ + FA   + G     ++++ L  +GY    + G  +  DRQ
Sbjct:   49 VIDAGANVGQFALLMRHFHRDAVIHAFEPFPSSAAIFARLFAQDRC-VHLHRHALGMAAVEADLHVSRRADSSS--LLPISSSQTV---------------------FAPGTEEVGVLTVPVRRLDDVLSSADLPRPSLLKIDVQGGELDVLKGAEGLLPHLDYIYVEVSFAQFYQ-GQPLANEVIDHLQARGYCLTGIGGTAQ--DRQ 230          
BLAST of Gcaud7304.t1 vs. uniprot
Match: A0A7S4J6A8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J6A8_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 1.370e-8
Identity = 66/243 (27.16%), Postives = 103/243 (42.39%), Query Frame = 0
Query:   52 PPGLLHKHAKHMLVLDIGANNGDSYTLTAAQHGHPVIAFEPSPIVNSLFQKVMRQHKVPLSVYNFTSGQHSQQYSASKPSKLSSNNVFLIPVALSNTTTVLNFHQSPCSDLQKCGKINHLAPDSNAKTAVKVP-------VYRLDDVP-LPADPKNIWFMKIDVEGYELQVLKGARKLISHAKIPYISIEFAPHGKNGTQWGVDLLEELYR-------QGYSCHHLRGFGRCHDRQFRSPSLK 279
            PPGL         VLD+GA +G +  L  A  GH V AFEPSP             K PL    F +  H+ + +             L PVA+SN T    F+ +  +      +  H   D + +  +  P       V R+D +  +  +   + + KID +G++  VL+GAR+L++  ++  ++ E  P GK G     +   E  R        GYSCH      +C   Q +S S++
Sbjct:   68 PPGL---------VLDVGAYDG-AQALAFAATGHRVYAFEPSP------------SKAPLIRAAFEASAHAARLT-------------LFPVAVSNETGSTAFYVT--TQRSSRSRTIHNGFDGSEQDQLDPPPWPSNRTVVRVDTLDNVVGNSATVLYAKIDAQGHDWTVLRGARRLVTSHRLQRVAFELWP-GKEGATGRTERANEYIRTATWLMAHGYSCH------KCSKYQTQSESVE 266          
BLAST of Gcaud7304.t1 vs. uniprot
Match: K8F7C2_9CHLO (Methyltransferase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F7C2_9CHLO)

HSP 1 Score: 65.5 bits (158), Expect = 1.910e-8
Identity = 55/207 (26.57%), Postives = 87/207 (42.03%), Query Frame = 0
Query:   64 LVLDIGANNGDSYTLTAAQHGHPVIAFEPSPI-VNSLFQKVMRQHKVPLSVYNFTSGQHSQQYSASKPSKLSSNNVFLIPVALSNTTTVLNFHQSPCSDLQKCGKINHLAPDSNAKTAVKVPVYRLDDVPLPADP----KNIWFMKIDVEGYELQVLKGARKLISHAKIPYISIEFAPHGKNGTQWGVDLLEELYRQGYSCHHLRGF 265
            L+LD+G+ +G      A   GH V+ FEP P   +++ +K+       L                          +   PVALSN T   +F+ S     +K  K++    D+      K+ V ++       D     +N+ ++K+D +GY+ QVL GARK I   +I YI+ E +P          +LL  L   GY C   + F
Sbjct:   76 LILDVGSFDGGDAVRYARSGGHRVLTFEPVPSKASAIIEKIQNSGLGHL--------------------------IEFFPVALSNYTGTADFYVSKTKLGKKKMKVSGTEQDAFTVPWDKLLVDKISVEVRELDEFIKFENVLYLKVDAQGYDAQVLFGARKAIREKRISYINFEISPGLTPDPTVYAELLSWLGEFGYFCFDCKFF 256          
BLAST of Gcaud7304.t1 vs. uniprot
Match: UPI0013016707 (FkbM family methyltransferase n=1 Tax=Skermanella pratensis TaxID=2233999 RepID=UPI0013016707)

HSP 1 Score: 64.7 bits (156), Expect = 3.220e-8
Identity = 50/171 (29.24%), Postives = 81/171 (47.37%), Query Frame = 0
Query:   64 LVLDIGANNGDSYTLTAAQHGHPVIAFEPSPIVNSLFQKVMRQHKVPLSVYNFTSGQHSQQYSASKPSKLSSNNVFLIPVALSNTTTVLNFHQSPCSDLQKCGKINHLAPDSNAKTAVKVPVYRLDDVPLPADPKNIWFMKIDVEGYELQVLKGARKLISHAKIPYISIEF 234
            +V+DIGAN G +  L A +H   V+A EPSP   S  ++ + +++V                           NV    VA S++   ++FHQ+            H+A   N   ++ VP  R+DD+      + + F+KIDVEG+E+ VL+G  K I+  + P + +EF
Sbjct:   49 IVMDIGANIGLTPVLLA-RHAAQVVALEPSPDNFSYLKRNLSENRV--------------------------TNVLAHQVAASSSLGTISFHQAQFGAGSSQVDARHIA--QNNTPSIVVPAVRVDDLVTELGLQRLDFVKIDVEGFEIDVLRGMEKTITGLR-PTVFLEF 189          
BLAST of Gcaud7304.t1 vs. uniprot
Match: A0A1H6I903_9FLAO (Methyltransferase, FkbM family n=4 Tax=Chryseobacterium group TaxID=2782232 RepID=A0A1H6I903_9FLAO)

HSP 1 Score: 64.3 bits (155), Expect = 3.330e-8
Identity = 67/245 (27.35%), Postives = 108/245 (44.08%), Query Frame = 0
Query:   61 KHMLVLDIGANNGDSYTLTAAQHGHP--VIAFEPSPIVNSLFQKVMRQHKVPLSVYNFTSGQHSQQYSASKPSKLSSNNVFLIPVALSNTTTVLNFHQSPCSDLQKC---GKINHLAPDSNAKTAV--KVPVYRLDDVPLPADPKNIWFMKIDVEGYELQVLKGARKLISHAKIPYISIEFAPHGKNGTQWGVDLLEELYRQGYSCHHLRGFGRCHDRQFRSPSLKCNYPFSLHDWKNAPTFEEY 298
            K+ + +D+GAN G +Y  T   H  P  + AFEP+P    LF+++ R                                V L  VALS+ +T+  F + P  + ++    G +     + N +  +  KV V  LDD+ L  + KN+ F+KIDVEG E+Q L+GA++ I   K P + +E          W   L+ E+   GYS ++L       DR+   P L      +  +  N   +++Y
Sbjct:   53 KNSVFIDVGANVG-AYLYTLENHLKPENIYAFEPNP---QLFKRLKRLFP----------------------------KVHLFSVALSDISTIAEF-KIPVINGERVHTRGTLQTSIKEKNEEKTILQKVEVKPLDDLNL--NLKNLSFIKIDVEGNEMQTLRGAKQTIYKYK-PILMVEMEQRHHKENLW--TLISEIADWGYSINYL-------DRKTLQPKLLTEEFLNQQNPDNVKNYKDY 252          
BLAST of Gcaud7304.t1 vs. uniprot
Match: A0A5N7USS9_9FLAO (FkbM family methyltransferase n=2 Tax=Chryseobacterium group TaxID=2782232 RepID=A0A5N7USS9_9FLAO)

HSP 1 Score: 63.9 bits (154), Expect = 4.460e-8
Identity = 66/246 (26.83%), Postives = 109/246 (44.31%), Query Frame = 0
Query:   60 AKHMLVLDIGANNGDSYTLTAAQHGHP--VIAFEPSPIVNSLFQKVMRQHKVPLSVYNFTSGQHSQQYSASKPSKLSSNNVFLIPVALSNTTTVLNFHQSPCSDLQKC---GKINHLAPDSNAKTAV--KVPVYRLDDVPLPADPKNIWFMKIDVEGYELQVLKGARKLISHAKIPYISIEFAPHGKNGTQWGVDLLEELYRQGYSCHHLRGFGRCHDRQFRSPSLKCNYPFSLHDWKNAPTFEEY 298
            AK  + +D+GAN G +Y  T  +H +P  + AFEP+     L++++ R                                V L  +ALS+ +T+  F + P  + +K    G +     + N +  +  KV V  LD++ L  +P  + F+KIDVEG E+Q L+GARK I   K P + +E      N   W   L+ E+   GYS ++L       DR    P +  +   +  +  N   +++Y
Sbjct:   52 AKDAVFIDVGANVG-AYVYTLEKHLNPENIFAFEPN---QRLYKRLKRLFP----------------------------KVNLFSLALSDISTIAEF-KIPVINGEKIHTRGTLQTSIREKNEEKTILQKVEVKPLDELNL--NPPKLDFIKIDVEGNEMQTLRGARKTIEKYK-PILMVEMEQRHHNENLW--TLISEIVGWGYSANYL-------DRGTLQPKILTDEFLNQQNPDNVKNYKDY 252          
BLAST of Gcaud7304.t1 vs. uniprot
Match: UPI00125E082D (uncharacterized protein LOC115998587 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E082D)

HSP 1 Score: 63.9 bits (154), Expect = 7.100e-8
Identity = 67/214 (31.31%), Postives = 99/214 (46.26%), Query Frame = 0
Query:   25 SLPHLREKRVYSTNMLPAFKKDNPQLFPPGLLHK---HAKHMLVLDIGANNGDSYTLTAAQHGHPVIAFEPSPIVNSLFQKVMRQHKVPLSVYNFTSGQHSQQYSASKPSKLSSNNVFLIPVALSNTTTVLNFHQSPCSDLQKCGKINHLAPDSNAKTAVKVPVYRLDDVPLPADPKNIWFMKIDVEGYELQVLKGARKLISHAK--IPYISIE 233
            +LP    K +  T    AF+K +      GLL        + + +D+GAN G + T  AA  G  V+AFEP      +F+ +    K+   VY    G+  + Y A+   +L +  +  +   L N            S +   G    LA  SN + AV+V    LDDV L ++P  +  +KIDV+G+E  VLKGA KL+S  K   PY+  E
Sbjct:   94 NLPEKPHKNINRTLKGKAFRKPDISETVQGLLENKRNEGSNGIFVDVGANVGMA-TFAAAVMGFKVLAFEP------VFENLQ---KICEGVYFNRVGELVEIYEAAASDQLGNIILHKLVGRLDN------------SAISATGA--KLAFKSNEEIAVEVKTVPLDDVILESEP--VLLLKIDVQGWEYHVLKGASKLLSRKKSEAPYLIYE 281          
The following BLAST results are available for this feature:
BLAST of Gcaud7304.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J295_9FLOR7.440e-14162.15Methyltransf_21 domain-containing protein n=1 Tax=... [more]
L1JNG8_GUITC2.300e-1127.01Methyltransf_21 domain-containing protein n=2 Tax=... [more]
A0A4Y4AYV6_9FLAO4.940e-931.28Methyltransf_21 domain-containing protein n=1 Tax=... [more]
A0A255Z6Q8_9PROT6.000e-928.71Methyltransf_21 domain-containing protein n=2 Tax=... [more]
A0A7S4J6A8_9EUKA1.370e-827.16Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
K8F7C2_9CHLO1.910e-826.57Methyltransferase n=1 Tax=Bathycoccus prasinos Tax... [more]
UPI00130167073.220e-829.24FkbM family methyltransferase n=1 Tax=Skermanella ... [more]
A0A1H6I903_9FLAO3.330e-827.35Methyltransferase, FkbM family n=4 Tax=Chryseobact... [more]
A0A5N7USS9_9FLAO4.460e-826.83FkbM family methyltransferase n=2 Tax=Chryseobacte... [more]
UPI00125E082D7.100e-831.31uncharacterized protein LOC115998587 n=2 Tax=Ipomo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006342Methyltransferase FkbMPFAMPF05050Methyltransf_21coord: 67..255
e-value: 7.8E-17
score: 61.9
IPR006342Methyltransferase FkbMTIGRFAMTIGR01444TIGR01444coord: 65..234
e-value: 2.6E-19
score: 68.1
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 49..263
e-value: 1.4E-29
score: 104.9
NoneNo IPR availablePANTHERPTHR34203METHYLTRANSFERASE, FKBM FAMILY PROTEINcoord: 60..263
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..325
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availableTMHMMTMhelixcoord: 2..24
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 53..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_716_length_19192_cov_4.213758contigNODE_716_length_19192_cov_4.213758:14798..15775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7304.t1Gcaud7304.t1Gracilaria caudata M_176_S67 malemRNANODE_716_length_19192_cov_4.213758 14798..15775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7304.t1 ID=Gcaud7304.t1|Name=Gcaud7304.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=326bp
MLSVVVFLVATMSACVLCAYAVPASLPHLREKRVYSTNMLPAFKKDNPQL
FPPGLLHKHAKHMLVLDIGANNGDSYTLTAAQHGHPVIAFEPSPIVNSLF
QKVMRQHKVPLSVYNFTSGQHSQQYSASKPSKLSSNNVFLIPVALSNTTT
VLNFHQSPCSDLQKCGKINHLAPDSNAKTAVKVPVYRLDDVPLPADPKNI
WFMKIDVEGYELQVLKGARKLISHAKIPYISIEFAPHGKNGTQWGVDLLE
ELYRQGYSCHHLRGFGRCHDRQFRSPSLKCNYPFSLHDWKNAPTFEEYTE
TFEMRADRHKKSSLADLMCIRHGLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006342FkbM_mtfrase
IPR029063SAM-dependent_MTases