Gcaud7257.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7257.t1
Unique NameGcaud7257.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length163
Homology
BLAST of Gcaud7257.t1 vs. uniprot
Match: A0A2V3IYK0_9FLOR (Mitochondrial pyruvate carrier n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYK0_9FLOR)

HSP 1 Score: 218 bits (554), Expect = 4.440e-70
Identity = 113/160 (70.62%), Postives = 127/160 (79.38%), Query Frame = 0
Query:    1 MFSSLSARIASKGIRFGSRKLSXXXXXXXXXXSAAQTVTQSNGSFTSTIVNFINSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVYGGVDLFYKPPPEQE----GLAVAL 156
            M +SLSAR+AS  +R GSR L            A+   T++   +T +++ FINSPTGP+T+HFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACH TNEVAQCYQLQRVYGGVDLFYKP  + E    G+AVAL
Sbjct:    1 MMASLSARLASVALRGGSRTLCEKAGEKGAVDGAS---TEAATIWTRSVMKFINSPTGPRTSHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHATNEVAQCYQLQRVYGGVDLFYKPEQDGEAAVQGVAVAL 157          
BLAST of Gcaud7257.t1 vs. uniprot
Match: R7QQ02_CHOCR (Mitochondrial pyruvate carrier n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ02_CHOCR)

HSP 1 Score: 171 bits (434), Expect = 1.510e-52
Identity = 78/102 (76.47%), Postives = 88/102 (86.27%), Query Frame = 0
Query:   50 VNFINSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVYGGVDLFYKPPPEQEG 151
            + F++SPTGPKT+HFWGPVTNWGIS+AA+KDMTK PEKVSPNMT ALCVYSLLFMRFA++VQP N LLFACH TNE  Q YQLQRVYGGVD FYK    ++G
Sbjct:    1 MQFVHSPTGPKTSHFWGPVTNWGISLAALKDMTKPPEKVSPNMTAALCVYSLLFMRFAIKVQPRNMLLFACHATNETVQLYQLQRVYGGVDWFYKRDDPEQG 102          
BLAST of Gcaud7257.t1 vs. uniprot
Match: A0A1X6NSF9_PORUM (Mitochondrial pyruvate carrier n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSF9_PORUM)

HSP 1 Score: 153 bits (386), Expect = 2.440e-44
Identity = 71/105 (67.62%), Postives = 79/105 (75.24%), Query Frame = 0
Query:   47 STIVNFINSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVYGGVDLFYKPPPEQEG 151
            S +V F+ SPTGP TTHFWGP+TNWG+SIA   DM K P+ VS  MT ALCVYS LFMRFA RVQP N LL +CH TNE  Q YQLQR +GGVD FYKPPP + G
Sbjct:    8 SGLVRFLRSPTGPMTTHFWGPITNWGLSIAGFVDMYKPPDAVSERMTGALCVYSALFMRFAWRVQPRNLLLLSCHATNETVQLYQLQRCFGGVDFFYKPPPGRGG 112          
BLAST of Gcaud7257.t1 vs. uniprot
Match: A0A5J4YXC0_PORPP (Mitochondrial pyruvate carrier n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXC0_PORPP)

HSP 1 Score: 140 bits (354), Expect = 4.410e-40
Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 0
Query:   50 VNFINSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVYGGVDLFYKPPPEQE-----GLAVALETQPK 161
            V ++ SPTGP TTHFWGP  NWG++I+ + D+ K  +K+SPNMT ALC+YS+LFMRFA RVQP NYLLFACH TNE  Q YQLQR++GG D +     E +     GL  A+   P+
Sbjct:   15 VRWLKSPTGPMTTHFWGPAANWGLAISGLADLAKPADKLSPNMTGALCIYSILFMRFAWRVQPRNYLLFACHITNETVQLYQLQRIFGGYDYYELKRQEDQASSRIGLGAAIHDVPE 131          
BLAST of Gcaud7257.t1 vs. uniprot
Match: A0A7S3EP15_9RHOD (Mitochondrial pyruvate carrier n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EP15_9RHOD)

HSP 1 Score: 138 bits (347), Expect = 3.420e-39
Identity = 63/97 (64.95%), Postives = 73/97 (75.26%), Query Frame = 0
Query:   46 TSTIVNFINSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVYGGVDLF 142
            TS ++ FINSPTGP+TTHFWGPV NWG ++A + DM K  + VS  MT ALCVYSLLFMRFAL+VQP N +LF+CH  NEV Q YQ QR  GG D F
Sbjct:   13 TSVLMRFINSPTGPRTTHFWGPVANWGFALAGLVDMKKPADMVSSRMTAALCVYSLLFMRFALKVQPRNLILFSCHAANEVVQLYQFQRSLGGYDYF 109          
BLAST of Gcaud7257.t1 vs. uniprot
Match: A0A7S3AAJ2_9RHOD (Mitochondrial pyruvate carrier n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAJ2_9RHOD)

HSP 1 Score: 138 bits (347), Expect = 9.020e-39
Identity = 63/97 (64.95%), Postives = 73/97 (75.26%), Query Frame = 0
Query:   46 TSTIVNFINSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVYGGVDLF 142
            TS ++ FINSPTGP+TTHFWGPV NWG ++A + DM K  + VS  MT ALCVYSLLFMRFAL+VQP N +LF+CH  NEV Q YQ QR  GG D F
Sbjct:   13 TSVLMRFINSPTGPRTTHFWGPVANWGFALAGLVDMKKPADMVSSRMTAALCVYSLLFMRFALKVQPRNLILFSCHAANEVVQLYQFQRSLGGYDYF 109          
BLAST of Gcaud7257.t1 vs. uniprot
Match: A0A8J4D4A5_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4D4A5_9CHLO)

HSP 1 Score: 135 bits (340), Expect = 4.460e-38
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = 0
Query:   44 SFTSTIVNFINSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVY 136
            SF++ ++NF NSPTGPKTTHFWGPV NWG  +A + DM K PE +SPNMT  +CVYSLLFMRFA  V+P NYLL ACH +NE  Q YQL R Y
Sbjct:    3 SFSARLLNFWNSPTGPKTTHFWGPVANWGFVLAGLADMRKDPEYISPNMTGVMCVYSLLFMRFAWEVKPRNYLLLACHASNETVQLYQLSRWY 95          
BLAST of Gcaud7257.t1 vs. uniprot
Match: D8TN38_VOLCA (Mitochondrial pyruvate carrier n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TN38_VOLCA)

HSP 1 Score: 135 bits (339), Expect = 7.130e-38
Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = 0
Query:   44 SFTSTIVNFINSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVY 136
            SF++ ++NF NSPTGPKTTHFWGPV NWG  +A + DM K PE +SPNMT  +C+YSLLFMRFA  V+P NYLL ACH +NE  Q YQL R Y
Sbjct:    3 SFSARLLNFWNSPTGPKTTHFWGPVANWGFVLAGLADMRKDPEYISPNMTGVMCIYSLLFMRFAWEVKPRNYLLLACHASNETVQLYQLSRWY 95          
BLAST of Gcaud7257.t1 vs. uniprot
Match: A0A6T6LCX5_9RHOD (Mitochondrial pyruvate carrier n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6LCX5_9RHOD)

HSP 1 Score: 133 bits (335), Expect = 1.720e-37
Identity = 63/100 (63.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:   54 NSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVYGGVDLFYKPPPEQEGLA 153
            NSPTGP+TTHFWGPV NWG +IA + DM K  + VS  MT ALCVYSLLFMRFAL+VQP N +LF+CH TNEV Q YQ QR  GG D F      +E  A
Sbjct:   12 NSPTGPRTTHFWGPVANWGFAIAGLVDMKKPADMVSSRMTAALCVYSLLFMRFALKVQPRNLILFSCHATNEVVQLYQFQRSLGGYDYFAGKKMAEEAAA 111          
BLAST of Gcaud7257.t1 vs. uniprot
Match: A8I311_CHLRE (Mitochondrial pyruvate carrier n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8I311_CHLRE)

HSP 1 Score: 130 bits (327), Expect = 3.090e-36
Identity = 58/90 (64.44%), Postives = 67/90 (74.44%), Query Frame = 0
Query:   47 STIVNFINSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYSLLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVY 136
            S  + ++NSPTGPKTTHFWGPV NWG  +A + DM K PE +SPNMT  +CVYS+LFMRFA  VQP NYLL ACH +NE  Q YQL R Y
Sbjct:    3 SRFMQWVNSPTGPKTTHFWGPVANWGFVLAGLADMRKDPEYISPNMTGVMCVYSVLFMRFAWEVQPRNYLLLACHASNETVQLYQLSRWY 92          
The following BLAST results are available for this feature:
BLAST of Gcaud7257.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYK0_9FLOR4.440e-7070.63Mitochondrial pyruvate carrier n=1 Tax=Gracilariop... [more]
R7QQ02_CHOCR1.510e-5276.47Mitochondrial pyruvate carrier n=1 Tax=Chondrus cr... [more]
A0A1X6NSF9_PORUM2.440e-4467.62Mitochondrial pyruvate carrier n=1 Tax=Porphyra um... [more]
A0A5J4YXC0_PORPP4.410e-4055.56Mitochondrial pyruvate carrier n=1 Tax=Porphyridiu... [more]
A0A7S3EP15_9RHOD3.420e-3964.95Mitochondrial pyruvate carrier n=1 Tax=Rhodosorus ... [more]
A0A7S3AAJ2_9RHOD9.020e-3964.95Mitochondrial pyruvate carrier n=1 Tax=Rhodosorus ... [more]
A0A8J4D4A5_9CHLO4.460e-3865.59Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
D8TN38_VOLCA7.130e-3864.52Mitochondrial pyruvate carrier n=1 Tax=Volvox cart... [more]
A0A6T6LCX5_9RHOD1.720e-3763.00Mitochondrial pyruvate carrier n=1 Tax=Rhodosorus ... [more]
A8I311_CHLRE3.090e-3664.44Mitochondrial pyruvate carrier n=1 Tax=Chlamydomon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005336Mitochondrial pyruvate carrierPFAMPF03650MPCcoord: 51..136
e-value: 1.6E-33
score: 115.1
NoneNo IPR availablePANTHERPTHR14154:SF3MITOCHONDRIAL PYRUVATE CARRIERcoord: 49..135
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 49..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..87
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_86_length_54060_cov_4.498935contigNODE_86_length_54060_cov_4.498935:43916..44502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7257.t1Gcaud7257.t1Gracilaria caudata M_176_S67 malemRNANODE_86_length_54060_cov_4.498935 43916..44502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7257.t1 ID=Gcaud7257.t1|Name=Gcaud7257.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=163bp
MFSSLSARIASKGIRFGSRKLSEKAGEKAGEASAAQTVTQSNGSFTSTIV
NFINSPTGPKTTHFWGPVTNWGISIAAMKDMTKSPEKVSPNMTIALCVYS
LLFMRFALRVQPTNYLLFACHGTNEVAQCYQLQRVYGGVDLFYKPPPEQE
GLAVALETQPKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005336MPC